Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0780
         (485 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0079 + 9669666-9669728,9670779-9672545                           27   8.0  
08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420           27   8.0  

>11_03_0079 + 9669666-9669728,9670779-9672545
          Length = 609

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 413 LFIHNRLRTLFETCKQMESAFLI 481
           +FI + L TL+  C Q+ES++L+
Sbjct: 255 VFIGSSLITLYSRCSQLESSYLV 277


>08_01_0851 + 8383043-8383301,8384654-8384824,8384907-8386420
          Length = 647

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 413 LFIHNRLRTLFETCKQMESAFLI 481
           +FI + L TL+  C Q+ES++L+
Sbjct: 293 VFIGSSLITLYSRCSQLESSYLV 315


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,847,157
Number of Sequences: 37544
Number of extensions: 207397
Number of successful extensions: 409
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)