Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0780
         (485 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68159-4|CAA92285.1|  323|Caenorhabditis elegans Hypothetical pr...    31   0.59 
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U80027-10|AAC48118.3|  295|Caenorhabditis elegans Serpentine rec...    27   9.5  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        27   9.5  
AF078785-7|AAC27086.2|  295|Caenorhabditis elegans Serpentine re...    27   9.5  
AF002198-6|AAF99938.1|  295|Caenorhabditis elegans Serpentine re...    27   9.5  

>Z68159-4|CAA92285.1|  323|Caenorhabditis elegans Hypothetical
           protein C33D9.4 protein.
          Length = 323

 Score = 30.7 bits (66), Expect = 0.59
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 354 SFIHSTIKIRFCMRALVCSAKLFXKPSATVLDS 256
           S+IH  + I  C   L+C+A +F K  AT L+S
Sbjct: 195 SYIHLMMSIIMCFLTLLCTALMFFKLRATSLNS 227


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 477 RNADSICLHVSNNVRRR 427
           +  D IC H+SNN+R+R
Sbjct: 150 KQIDIICRHISNNLRKR 166


>U80027-10|AAC48118.3|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 5 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 132 IFLCGILPTAPNLLRGERFCSFKKL 58
           +FLC  LPT  N +    F SFK +
Sbjct: 230 VFLCDFLPTISNYIPKTPFFSFKNI 254


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 477 RNADSICLHVSNNVRRR 427
           +  D IC H+SNN+R+R
Sbjct: 150 KQIDIICRHISNNLRKR 166


>AF078785-7|AAC27086.2|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 2 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 132 IFLCGILPTAPNLLRGERFCSFKKL 58
           +FLC  LPT  N +    F SFK +
Sbjct: 230 VFLCDFLPTFSNYVNDYPFFSFKNI 254


>AF002198-6|AAF99938.1|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 1 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 132 IFLCGILPTAPNLLRGERFCSFKKL 58
           +FLC  LPT  N +    F SFK +
Sbjct: 230 VFLCDFLPTFSNYVNDYPFFSFKNI 254


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,190,034
Number of Sequences: 27780
Number of extensions: 178674
Number of successful extensions: 325
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)