BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0779
(493 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p pro... 127 9e-30
AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p pro... 127 9e-30
AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer pro... 127 9e-30
AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB... 127 9e-30
AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA... 127 9e-30
BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p pro... 30 2.0
AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protei... 30 2.0
AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein. 30 2.0
AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA... 30 2.0
AY118508-1|AAM49877.1| 973|Drosophila melanogaster LD13350p pro... 29 3.4
AE014297-1738|AAN13588.1| 954|Drosophila melanogaster CG9351-PC... 29 3.4
AE014297-1737|AAN13587.1| 954|Drosophila melanogaster CG9351-PB... 29 3.4
AE014297-1736|AAF54974.1| 954|Drosophila melanogaster CG9351-PA... 29 3.4
BT011104-1|AAR82770.1| 389|Drosophila melanogaster LP09056p pro... 28 6.0
AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC... 28 6.0
AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB... 28 6.0
AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA... 28 6.0
>BT001628-1|AAN71383.1| 883|Drosophila melanogaster RE37840p
protein.
Length = 883
Score = 127 bits (306), Expect = 9e-30
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TKLFQSKDVVLRR+VYL IKE
Sbjct: 40 NETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKLFQSKDVVLRRMVYLGIKE 99
Query: 182 LSPMAQDVIIVTSSL 226
LS +A+DVIIVTSSL
Sbjct: 100 LSSIAEDVIIVTSSL 114
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALCSITD+TMLQA+ERYMKQ IVDKN +V+ N
Sbjct: 125 YRAAAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWAN 184
Query: 436 EAHEAMTSDHVMGSYQAL 489
EA EA+ SD++M Y AL
Sbjct: 185 EAQEALNSDNIMVQYHAL 202
>AY113545-1|AAM29550.1| 878|Drosophila melanogaster RE62270p
protein.
Length = 878
Score = 127 bits (306), Expect = 9e-30
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TKLFQSKDVVLRR+VYL IKE
Sbjct: 35 NETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKLFQSKDVVLRRMVYLGIKE 94
Query: 182 LSPMAQDVIIVTSSL 226
LS +A+DVIIVTSSL
Sbjct: 95 LSSIAEDVIIVTSSL 109
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALCSITD+TMLQA+ERYMKQ IVDKN +V+ N
Sbjct: 120 YRAAAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWAN 179
Query: 436 EAHEAMTSDHVMGSYQAL 489
EA EA+ SD++M Y AL
Sbjct: 180 EAQEALNSDNIMVQYHAL 197
>AF191563-1|AAF05719.1| 879|Drosophila melanogaster coatomer
protein gamma subunit protein.
Length = 879
Score = 127 bits (306), Expect = 9e-30
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TKLFQSKDVVLRR+VYL IKE
Sbjct: 36 NETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKLFQSKDVVLRRMVYLGIKE 95
Query: 182 LSPMAQDVIIVTSSL 226
LS +A+DVIIVTSSL
Sbjct: 96 LSSIAEDVIIVTSSL 110
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALCSITD+TMLQA+ERYMKQ IVDKN +V+ N
Sbjct: 121 YRAAAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWAN 180
Query: 436 EAHEAMTSDHVMGSYQAL 489
EA EA+ SD++M Y AL
Sbjct: 181 EAQEALNSDNIMVQYHAL 198
>AE014297-4757|AAN14275.1| 883|Drosophila melanogaster CG1528-PB,
isoform B protein.
Length = 883
Score = 127 bits (306), Expect = 9e-30
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TKLFQSKDVVLRR+VYL IKE
Sbjct: 40 NETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKLFQSKDVVLRRMVYLGIKE 99
Query: 182 LSPMAQDVIIVTSSL 226
LS +A+DVIIVTSSL
Sbjct: 100 LSSIAEDVIIVTSSL 114
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALCSITD+TMLQA+ERYMKQ IVDKN +V+ N
Sbjct: 125 YRAAAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWAN 184
Query: 436 EAHEAMTSDHVMGSYQAL 489
EA EA+ SD++M Y AL
Sbjct: 185 EAQEALNSDNIMVQYHAL 202
>AE014297-4756|AAF57160.1| 879|Drosophila melanogaster CG1528-PA,
isoform A protein.
Length = 879
Score = 127 bits (306), Expect = 9e-30
Identities = 61/75 (81%), Positives = 68/75 (90%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TPV+PRKCIHILTKILYL+NQGE+L +EATD FFA TKLFQSKDVVLRR+VYL IKE
Sbjct: 36 NETPVNPRKCIHILTKILYLINQGEQLVAREATDCFFAMTKLFQSKDVVLRRMVYLGIKE 95
Query: 182 LSPMAQDVIIVTSSL 226
LS +A+DVIIVTSSL
Sbjct: 96 LSSIAEDVIIVTSSL 110
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/78 (52%), Positives = 48/78 (61%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALCSITD+TMLQA+ERYMKQ IVDKN +V+ N
Sbjct: 121 YRAAAIRALCSITDNTMLQAVERYMKQCIVDKNAAVSCAALVSSLRLANTAGDVVKRWAN 180
Query: 436 EAHEAMTSDHVMGSYQAL 489
EA EA+ SD++M Y AL
Sbjct: 181 EAQEALNSDNIMVQYHAL 198
>BT010031-1|AAQ22500.1| 1159|Drosophila melanogaster RE01344p
protein.
Length = 1159
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 89 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 223
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 55 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 99
>AJ011778-1|CAA09771.1| 1160|Drosophila melanogaster Beta3 protein
protein.
Length = 1160
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 89 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 223
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 119
>AF247194-1|AAF71924.1| 1160|Drosophila melanogaster ruby protein.
Length = 1160
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 89 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 223
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 119
>AE014298-634|AAF45950.1| 1160|Drosophila melanogaster CG11427-PA
protein.
Length = 1160
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = +2
Query: 89 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSS 223
++A+D+F A K SK++ +++LVY+ + + QD+ +++ S
Sbjct: 75 RDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIS 119
>AY118508-1|AAM49877.1| 973|Drosophila melanogaster LD13350p
protein.
Length = 973
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 476 EPIT*SEVMASCASFTEGRTKPGT--VADRCKAETSAADPTAGFLSTIACFMYLSIACS 306
E T S +S +S + + PG+ A C + T AA + FLSTIA M S+ +
Sbjct: 823 EASTSSSSASSSSSSSSSSSPPGSSAAASLCDSATVAAVAASQFLSTIATAMAASVTAA 881
>AE014297-1738|AAN13588.1| 954|Drosophila melanogaster CG9351-PC,
isoform C protein.
Length = 954
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 476 EPIT*SEVMASCASFTEGRTKPGT--VADRCKAETSAADPTAGFLSTIACFMYLSIACS 306
E T S +S +S + + PG+ A C + T AA + FLSTIA M S+ +
Sbjct: 804 EASTSSSSASSSSSSSSSSSPPGSSAAASLCDSATVAAVAASQFLSTIATAMAASVTAA 862
>AE014297-1737|AAN13587.1| 954|Drosophila melanogaster CG9351-PB,
isoform B protein.
Length = 954
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 476 EPIT*SEVMASCASFTEGRTKPGT--VADRCKAETSAADPTAGFLSTIACFMYLSIACS 306
E T S +S +S + + PG+ A C + T AA + FLSTIA M S+ +
Sbjct: 804 EASTSSSSASSSSSSSSSSSPPGSSAAASLCDSATVAAVAASQFLSTIATAMAASVTAA 862
>AE014297-1736|AAF54974.1| 954|Drosophila melanogaster CG9351-PA,
isoform A protein.
Length = 954
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 476 EPIT*SEVMASCASFTEGRTKPGT--VADRCKAETSAADPTAGFLSTIACFMYLSIACS 306
E T S +S +S + + PG+ A C + T AA + FLSTIA M S+ +
Sbjct: 804 EASTSSSSASSSSSSSSSSSPPGSSAAASLCDSATVAAVAASQFLSTIATAMAASVTAA 862
>BT011104-1|AAR82770.1| 389|Drosophila melanogaster LP09056p
protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 342 NSLFHVPLNSLQHCTVCDATQSSNGGRS 259
+ L H L +Q+ DAT+SS+GG S
Sbjct: 49 SGLLHTELREVQNAIDSDATESSSGGES 76
>AE014297-2085|AAN13677.1| 1570|Drosophila melanogaster CG4699-PC,
isoform C protein.
Length = 1570
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 342 NSLFHVPLNSLQHCTVCDATQSSNGGRS 259
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
>AE014297-2084|AAF55225.1| 1570|Drosophila melanogaster CG4699-PB,
isoform B protein.
Length = 1570
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 342 NSLFHVPLNSLQHCTVCDATQSSNGGRS 259
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
>AE014297-2083|AAF55226.1| 1570|Drosophila melanogaster CG4699-PA,
isoform A protein.
Length = 1570
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 342 NSLFHVPLNSLQHCTVCDATQSSNGGRS 259
+ L H L +Q+ DAT+SS+GG S
Sbjct: 596 SGLLHTELREVQNAIDSDATESSSGGES 623
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,561,765
Number of Sequences: 53049
Number of extensions: 439864
Number of successful extensions: 1019
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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