Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0779
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 98 3e-21
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 98 3e-21
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 29 1.4
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 29 2.4
U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin prote... 29 2.4
U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin prote... 29 2.4
U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin prote... 29 2.4
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 29 2.4
AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin pro... 29 2.4
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 7.4
U28944-3|AAN63455.1| 205|Caenorhabditis elegans Hypothetical pr... 27 7.4
U28944-2|AAL08028.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.4
U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical pr... 27 7.4
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 7.4
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 7.4
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 7.4
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 7.4
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 7.4
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TP++ RKC IL+K++Y++ QGE + EAT+ FF TKL+QSKDV LRR+VYL +KE
Sbjct: 44 NETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKE 103
Query: 182 LSPMAQDVIIVTSSL 226
L+ ++ DVIIVTSSL
Sbjct: 104 LAEVSDDVIIVTSSL 118
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/79 (50%), Positives = 46/79 (58%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALC ITD+ MLQ IERYMKQAIVD+N +VR N
Sbjct: 129 YRAAAIRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWAN 188
Query: 436 EAHEAMTSDHVMGSYQALA 492
E EA++SD+ M Y ALA
Sbjct: 189 EVQEAVSSDNHMVQYHALA 207
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 98.3 bits (234), Expect = 3e-21
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = +2
Query: 2 NSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKE 181
N TP++ RKC IL+K++Y++ QGE + EAT+ FF TKL+QSKDV LRR+VYL +KE
Sbjct: 31 NETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKE 90
Query: 182 LSPMAQDVIIVTSSL 226
L+ ++ DVIIVTSSL
Sbjct: 91 LAEVSDDVIIVTSSL 105
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/79 (50%), Positives = 46/79 (58%)
Frame = +1
Query: 256 YRPAAIRALCSITDSTMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPGLVRPSVN 435
YR AAIRALC ITD+ MLQ IERYMKQAIVD+N +VR N
Sbjct: 116 YRAAAIRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWAN 175
Query: 436 EAHEAMTSDHVMGSYQALA 492
E EA++SD+ M Y ALA
Sbjct: 176 EVQEAVSSDNHMVQYHALA 194
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 129 NSFVVAKNISVASCVVNSSPWFSK*SIFVKIWMHFLGCT 13
NS+V+ KN++ VVN+ PW +F +++ + T
Sbjct: 486 NSYVLKKNLNTVLIVVNNYPWKYGMGLFQRLYEPYFAST 524
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 357 GILINNSLFHVPLNSLQHCTVCDATQSSNGGRSVPS 250
G+L+ + + +N L CD + SNGG +PS
Sbjct: 56 GLLVKMTRQIIGINKLIAINACDPNKCSNGGTCIPS 91
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 357 GILINNSLFHVPLNSLQHCTVCDATQSSNGGRSVPS 250
G+L+ + + +N L CD + SNGG +PS
Sbjct: 56 GLLVKMTRQIIGINKLIAINACDPNKCSNGGTCIPS 91
>U00032-4|AAL32216.1| 953|Caenorhabditis elegans Rabphilin protein
1, isoform a protein.
Length = 953
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 324 PLNSLQHCTVCDATQSSNGGRSVPSSLPVMS 232
PLN ++H + +T SS G R V S+ PV++
Sbjct: 515 PLNVMEHKSSSASTASSGGNRRVGSAEPVLN 545
>U00032-3|AAL32217.1| 1028|Caenorhabditis elegans Rabphilin protein
1, isoform b protein.
Length = 1028
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 324 PLNSLQHCTVCDATQSSNGGRSVPSSLPVMS 232
PLN ++H + +T SS G R V S+ PV++
Sbjct: 590 PLNVMEHKSSSASTASSGGNRRVGSAEPVLN 620
>U00032-2|AAL32218.1| 962|Caenorhabditis elegans Rabphilin protein
1, isoform c protein.
Length = 962
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 324 PLNSLQHCTVCDATQSSNGGRSVPSSLPVMS 232
PLN ++H + +T SS G R V S+ PV++
Sbjct: 524 PLNVMEHKSSSASTASSGGNRRVGSAEPVLN 554
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 324 PLNSLQHCTVCDATQSSNGGRSVPSSLPVMS 232
PLN ++H + +T SS G R V S+ PV++
Sbjct: 668 PLNVMEHKSSSASTASSGGNRRVGSAEPVLN 698
>AF399852-1|AAK84870.1| 953|Caenorhabditis elegans rabphilin
protein.
Length = 953
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -2
Query: 324 PLNSLQHCTVCDATQSSNGGRSVPSSLPVMS 232
PLN ++H + +T SS G R V S+ PV++
Sbjct: 515 PLNVMEHKSSSASTASSGGNRRVGSAEPVLN 545
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 493 QPRLGKNPSHDLKSWPRVLHLPRDALNPVRWLT 395
+PRL K D PRVL + + P+RW T
Sbjct: 1341 RPRLKKTCEKDTCDGPRVLQKLQADVPPIRWAT 1373
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 493 QPRLGKNPSHDLKSWPRVLHLPRDALNPVRWLT 395
+PRL K D PRVL + + P+RW T
Sbjct: 1341 RPRLKKTCEKDTCDGPRVLQKLQADVPPIRWAT 1373
>U28944-3|AAN63455.1| 205|Caenorhabditis elegans Hypothetical
protein C18A3.4c protein.
Length = 205
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 365 PTAGFLSTIACFMYLSIACSIVLSVMLH 282
P FLS + F+Y S A +++ ++LH
Sbjct: 101 PRVWFLSHLLSFLYFSFALWVIICLLLH 128
>U28944-2|AAL08028.1| 339|Caenorhabditis elegans Hypothetical
protein C18A3.4b protein.
Length = 339
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 365 PTAGFLSTIACFMYLSIACSIVLSVMLH 282
P FLS + F+Y S A +++ ++LH
Sbjct: 101 PRVWFLSHLLSFLYFSFALWVIICLLLH 128
>U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical
protein C18A3.4a protein.
Length = 342
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 365 PTAGFLSTIACFMYLSIACSIVLSVMLH 282
P FLS + F+Y S A +++ ++LH
Sbjct: 101 PRVWFLSHLLSFLYFSFALWVIICLLLH 128
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 141
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1056 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1101
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 141
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1090 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1135
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 141
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1148 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1193
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 141
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1201 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1246
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 27.1 bits (57), Expect = 7.4
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 QLYTRASEKMHPYFDENTLFTKPRR-RINHAGGYGYIFCHYETVSVKG 141
++Y + +E MHP ++T PR +H G + +ET+S KG
Sbjct: 1120 EVYGKDTEAMHPKIMVPRVWTNPRNFNFDHVG--NAMLALFETLSFKG 1165
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,512,954
Number of Sequences: 27780
Number of extensions: 226295
Number of successful extensions: 551
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 551
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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