Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0778
(718 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI000051A52B Cluster: PREDICTED: similar to Mediator c... 103 3e-21
UniRef50_O43513 Cluster: Mediator of RNA polymerase II transcrip... 86 7e-16
UniRef50_UPI0000E46F5B Cluster: PREDICTED: hypothetical protein;... 50 4e-05
UniRef50_Q9LZD7 Cluster: Transcriptional co-activator-like prote... 48 3e-04
UniRef50_Q55DQ5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A4RIW8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.020
UniRef50_Q6CE96 Cluster: Mediator of RNA polymerase II transcrip... 41 0.035
UniRef50_UPI000023F560 Cluster: hypothetical protein FG05360.1; ... 39 0.14
UniRef50_A6RX85 Cluster: Putative uncharacterized protein; n=2; ... 38 0.19
UniRef50_A2QWI7 Cluster: Mediator of RNA polymerase II transcrip... 38 0.25
UniRef50_Q0U6Z7 Cluster: Mediator of RNA polymerase II transcrip... 38 0.33
UniRef50_Q95Q17 Cluster: Mediator of RNA polymerase II transcrip... 37 0.43
UniRef50_Q7S2D4 Cluster: Mediator of RNA polymerase II transcrip... 36 0.76
UniRef50_Q1K2X2 Cluster: Pilus assembly protein, PilO precursor;... 35 2.3
UniRef50_A5DHA8 Cluster: Putative uncharacterized protein; n=1; ... 35 2.3
UniRef50_Q6CP69 Cluster: Mediator of RNA polymerase II transcrip... 35 2.3
UniRef50_Q2GRJ3 Cluster: Mediator of RNA polymerase II transcrip... 35 2.3
UniRef50_Q0SJE8 Cluster: Transposase; n=2; Rhodococcus sp. RHA1|... 34 4.0
UniRef50_A0DE19 Cluster: Chromosome undetermined scaffold_47, wh... 34 4.0
UniRef50_Q08278 Cluster: Mediator of RNA polymerase II transcrip... 34 4.0
UniRef50_Q5BRH8 Cluster: SJCHGC08229 protein; n=1; Schistosoma j... 33 9.3
UniRef50_O74388 Cluster: Uncharacterized protein C3H7.13; n=1; S... 33 9.3
UniRef50_Q4P2Y1 Cluster: Mediator of RNA polymerase II transcrip... 33 9.3
>UniRef50_UPI000051A52B Cluster: PREDICTED: similar to Mediator
complex subunit 7 CG31390-PA isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Mediator complex
subunit 7 CG31390-PA isoform 1 - Apis mellifera
Length = 227
Score = 103 bits (248), Expect = 3e-21
Identities = 48/75 (64%), Positives = 53/75 (70%)
Frame = +2
Query: 257 HDSYSMFGNSFNADDAIIRSLESQGFRRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVH 436
HD+YSMFGN FNADD IIR LE+QG +RLYP HF+RRRELKK V
Sbjct: 41 HDTYSMFGNVFNADDTIIRPLEAQGIKRLYPQHFDRRRELKKLNHSLLVNFLDLIDLLVQ 100
Query: 437 CPDSPKRAEKVEDLS 481
CPDSP+RAEKVEDLS
Sbjct: 101 CPDSPRRAEKVEDLS 115
Score = 102 bits (244), Expect = 1e-20
Identities = 46/70 (65%), Positives = 59/70 (84%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQNELESNFK 687
LNEFRPHQARETLRVMMELQ+RQR+ETA RF+KHL+KVQ ILQ+ALQ LPD +EL+S
Sbjct: 125 LNEFRPHQARETLRVMMELQRRQRIETALRFQKHLEKVQEILQHALQMLPDTSELDSKLA 184
Query: 688 VPNELLDQME 717
+ + ++ ++
Sbjct: 185 INTDAMESVD 194
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/35 (80%), Positives = 29/35 (82%)
Frame = +3
Query: 150 ETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRP 254
E QVSSLPLPP+QYIN YTDENVRR RAP PP P
Sbjct: 5 EAIQVSSLPLPPVQYINLYTDENVRRGRAPRPPLP 39
>UniRef50_O43513 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=34; Eumetazoa|Rep: Mediator
of RNA polymerase II transcription subunit 7 - Homo
sapiens (Human)
Length = 233
Score = 86.2 bits (204), Expect = 7e-16
Identities = 41/68 (60%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQ-NELESNF 684
+NE+RPHQARETLRVMME+QKRQR+ETA RF+KHL++V ++QN L SLPD E+
Sbjct: 123 INEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEAGM 182
Query: 685 KVPNELLD 708
+V E +D
Sbjct: 183 RVKTEPMD 190
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/73 (47%), Positives = 42/73 (57%)
Frame = +2
Query: 260 DSYSMFGNSFNADDAIIRSLESQGFRRLYPMHFERRRELKKXXXXXXXXXXXXXXXXVHC 439
DSY MFGN F DD IIR LESQG RL+PM F+ ++EL+K +
Sbjct: 40 DSYMMFGNQFQCDDLIIRPLESQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRS 99
Query: 440 PDSPKRAEKVEDL 478
P S KR EK+EDL
Sbjct: 100 PGSIKREEKLEDL 112
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +3
Query: 144 MSETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRP 254
M E QVS+LP PPMQYI YTDEN++ AP PP P
Sbjct: 1 MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPP 37
>UniRef50_UPI0000E46F5B Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 96
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 556 MELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQNE 669
ME+QKRQR++TA RF+KHL+KV ILQ SLP+ E
Sbjct: 1 MEVQKRQRLDTAERFQKHLEKVTEILQGCFTSLPENVE 38
>UniRef50_Q9LZD7 Cluster: Transcriptional co-activator-like protein;
n=13; Magnoliophyta|Rep: Transcriptional
co-activator-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 168
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQ 663
LN RPHQAR TL +MELQ +QR + K+ ++ QG+L++A +L Q
Sbjct: 117 LNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQGLLKDAFVTLDGQ 168
>UniRef50_Q55DQ5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 345
Score = 44.0 bits (99), Expect = 0.004
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLP-DQNELESNF 684
LN +RPHQARETL +M Q +Q+ ++ KK LD + L N+ ++L + +++S
Sbjct: 233 LNSYRPHQARETLLSIMNEQIKQKNQSNESIKKALDICKESLMNSFKNLNIEDKQIDSAT 292
Query: 685 KVPNEL 702
+P +
Sbjct: 293 PLPTNI 298
>UniRef50_A4RIW8 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 249
Score = 41.5 bits (93), Expect = 0.020
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 505 SLNEFRPHQARETL-RVMMELQKRQRVETAARFKKHLDKVQGILQN-ALQSLPDQNELES 678
++NE+RPHQ RE L + M E R R ETAA + DK + +L+ +P + EL
Sbjct: 158 AINEYRPHQTREQLIQTMQERLDRTRAETAA-LRAAADKARRVLEGLGSIKVPTREELLG 216
Query: 679 NFKVPNELLDQME 717
++ V +E L + E
Sbjct: 217 DWAVTSEDLAREE 229
>UniRef50_Q6CE96 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=1; Yarrowia lipolytica|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Yarrowia lipolytica (Candida lipolytica)
Length = 235
Score = 40.7 bits (91), Expect = 0.035
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQNELESNFK 687
LNE+RPHQARE+L +M+ Q + + ++ DKV+ ++ + +E E
Sbjct: 150 LNEYRPHQARESLVTLMQQQINDKKQHVENIRQSCDKVRDTIRVLSKQFDQVDEFEETGG 209
Query: 688 VPNE 699
V E
Sbjct: 210 VTTE 213
>UniRef50_UPI000023F560 Cluster: hypothetical protein FG05360.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05360.1 - Gibberella zeae PH-1
Length = 246
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 508 LNEFRPHQARET-LRVMMELQKRQRVETAARFKKHLDKVQGILQN-ALQSLPD 660
LNE+RPHQARE+ + +M E R R ET A + +DK + +L S+PD
Sbjct: 161 LNEYRPHQARESVIALMQEHLDRTRTETMA-IRTQVDKARRVLDGLGSLSVPD 212
>UniRef50_A6RX85 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 246
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQ-KRQRVETAARFKKHLDKVQGILQ 636
LNE+RP+QARE+L MM+ Q + R ET K +KV+G+L+
Sbjct: 166 LNEYRPYQARESLIAMMQDQLDKSRAETEG-IMKMKEKVEGMLE 208
>UniRef50_A2QWI7 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=9; Eurotiomycetidae|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Aspergillus niger
Length = 263
Score = 37.9 bits (84), Expect = 0.25
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQN------ALQSLPDQNE 669
LN +RPHQARE+L +MME Q + E + K ++ G+L+ A QS P Q +
Sbjct: 174 LNLYRPHQARESLIMMMEEQLSRTKEEIQQMDKLKAEITGVLERLEADGIAAQSHPQQTD 233
>UniRef50_Q0U6Z7 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=1; Phaeosphaeria nodorum|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 276
Score = 37.5 bits (83), Expect = 0.33
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQ 663
+NE+RPHQARETL ME Q ++ +K ++V +L+ + +P +
Sbjct: 190 INEYRPHQARETLISEMERQVEKKKMEIQGVRKMKERVGEVLEGFGREIPSE 241
>UniRef50_Q95Q17 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=3; Caenorhabditis|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Caenorhabditis elegans
Length = 251
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSL 654
+NEFRP QAR+++R++ E Q + + FKK+L + ++ + Q +
Sbjct: 124 INEFRPVQARDSVRILQERQIEELSDICKDFKKYLRDGREVVDDQFQMI 172
>UniRef50_Q7S2D4 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=1; Neurospora crassa|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Neurospora crassa
Length = 347
Score = 36.3 bits (80), Expect = 0.76
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 LNEFRPHQARETL-RVMMELQKRQRVETAARFKKHLDKVQGILQ 636
LNE+RPHQARE L ++M E + R ETAA + +K + +L+
Sbjct: 222 LNEYRPHQAREQLIQLMQERLDQTRAETAAN-RAVAEKARRVLE 264
>UniRef50_Q1K2X2 Cluster: Pilus assembly protein, PilO precursor;
n=1; Desulfuromonas acetoxidans DSM 684|Rep: Pilus
assembly protein, PilO precursor - Desulfuromonas
acetoxidans DSM 684
Length = 200
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 481 FVIYSYTSSLNEFRPHQARETLRVMMELQKRQRV-ETAARFKKHLDKVQGILQNALQSLP 657
+ + Y + E Q + +V++ELQ+++R+ RFK +K++ L AL LP
Sbjct: 31 YAYFLYVPAQKELAKQQ-KNNKKVLVELQEKRRIANNLPRFKAEYEKMKKQLDLALNELP 89
Query: 658 DQNEL 672
+++E+
Sbjct: 90 NESEI 94
>UniRef50_A5DHA8 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 229
Score = 34.7 bits (76), Expect = 2.3
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +1
Query: 484 VIYSYTSSLNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQ 663
++ + LN +RPHQ+RE+L +++ RQ +E +DK ++ ++++ DQ
Sbjct: 141 ILININHILNTYRPHQSRESLIMLL----RQNIEQKRSEITEIDKTCDSIRQRIEAIMDQ 196
Query: 664 NELESNFKVPN 696
+ +S P+
Sbjct: 197 DTGQSEVVEPS 207
>UniRef50_Q6CP69 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=1; Kluyveromyces lactis|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 213
Score = 34.7 bits (76), Expect = 2.3
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGIL 633
LNE+RPHQ+RE+L ++ E Q + + K D+V+ L
Sbjct: 169 LNEYRPHQSRESLIMLFEEQLEHKRKEMEHINKVCDEVESKL 210
>UniRef50_Q2GRJ3 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=1; Chaetomium globosum|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Chaetomium globosum (Soil fungus)
Length = 263
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 484 VIYSYTSSLNEFRPHQARETL-RVMMELQKRQRVETAARFKKHLDKVQGILQN-ALQSLP 657
++ ++ +LNE+RPH ARE L ++M + R ETA + +DK + +++ A +P
Sbjct: 157 LLLNFHHTLNEYRPHHAREQLIQIMHAHGDQMRAETAG-IRSVVDKAKRMIEGLASIQVP 215
Query: 658 DQNELESN 681
+ ES+
Sbjct: 216 QLDNTESD 223
>UniRef50_Q0SJE8 Cluster: Transposase; n=2; Rhodococcus sp.
RHA1|Rep: Transposase - Rhodococcus sp. (strain RHA1)
Length = 137
Score = 33.9 bits (74), Expect = 4.0
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -2
Query: 489 NNKLRSSTFSALFGESGQ*TSKSNKSR-KFASSEWLSFFNSLLRSKCIGYNLRNPWLSNE 313
+N L S F L E S ++KS+ + EWLS+FN R +GY P +
Sbjct: 68 DNALAESFFQGLKREWLHGRSWTSKSQARLELFEWLSYFNRRRRHSALGY--LTPVEFEQ 125
Query: 312 RIIASSAL 289
R+IASS L
Sbjct: 126 RLIASSTL 133
>UniRef50_A0DE19 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_47,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 113
Score = 33.9 bits (74), Expect = 4.0
Identities = 21/78 (26%), Positives = 39/78 (50%)
Frame = +1
Query: 484 VIYSYTSSLNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQ 663
VI Y SS+ + +Q + +QK V T ++K+LDK+ I ++ Q
Sbjct: 9 VIDQYASSIVNYVDNQQKIIQLKTSTIQKLNEV-TIVHYQKNLDKINQIRSEFEETKSIQ 67
Query: 664 NELESNFKVPNELLDQME 717
N+L+ N + N++ + +E
Sbjct: 68 NKLDENIQKINQIQNSIE 85
>UniRef50_Q08278 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=4; Saccharomycetales|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 222
Score = 33.9 bits (74), Expect = 4.0
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Frame = +1
Query: 508 LNEFRPHQARETLRVMMELQ---KRQRVETAARFKKH----LDKVQGILQNALQSLPDQN 666
LNE+RPHQ+RE+L +++E Q KR + + K L +Q L+ QS P +
Sbjct: 162 LNEYRPHQSRESLIMLLEEQLEYKRGEIREIEQVCKQVHDKLTSIQDTLRTGSQSPPSSS 221
Query: 667 E 669
+
Sbjct: 222 Q 222
>UniRef50_Q5BRH8 Cluster: SJCHGC08229 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08229 protein - Schistosoma
japonicum (Blood fluke)
Length = 87
Score = 32.7 bits (71), Expect = 9.3
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 257 HDSYSMFGNSFNADDAIIRSLESQGFRRLYPMHFE 361
H S+ F N FN DDAII+ L ++ L+P+ F+
Sbjct: 2 HASHGDFSN-FNIDDAIIKRLHARNIFELFPVQFK 35
>UniRef50_O74388 Cluster: Uncharacterized protein C3H7.13; n=1;
Schizosaccharomyces pombe|Rep: Uncharacterized protein
C3H7.13 - Schizosaccharomyces pombe (Fission yeast)
Length = 301
Score = 32.7 bits (71), Expect = 9.3
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 123 RTDSRFTMSETAQVSSLPLPPMQYINFYTDENVRRNRAPLPPRPFM 260
R + ++ + +SSL +P ++++ D N++R+ +PL PF+
Sbjct: 194 RNNHHYSRKSSPHISSLAVPSTKHLDGERDRNLKRSTSPLSSSPFV 239
>UniRef50_Q4P2Y1 Cluster: Mediator of RNA polymerase II
transcription subunit 7; n=1; Ustilago maydis|Rep:
Mediator of RNA polymerase II transcription subunit 7 -
Ustilago maydis (Smut fungus)
Length = 210
Score = 32.7 bits (71), Expect = 9.3
Identities = 15/62 (24%), Positives = 35/62 (56%)
Frame = +1
Query: 484 VIYSYTSSLNEFRPHQARETLRVMMELQKRQRVETAARFKKHLDKVQGILQNALQSLPDQ 663
V+ + +NE RP QA+ETL+++M++Q +R + ++ ++ ++ + L Q
Sbjct: 144 VVVNMQFLINELRPVQAKETLKLIMQMQLERRKQEMQLIQERCATMRARVEELKKMLGKQ 203
Query: 664 NE 669
++
Sbjct: 204 SD 205
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,832,493
Number of Sequences: 1657284
Number of extensions: 11083994
Number of successful extensions: 27384
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27380
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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