Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0777
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.53 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 189 FLYCNYYSFYSQKVLMALY 245
           FL C YY +Y+  +L+ +Y
Sbjct: 96  FLLCTYYFYYAFIILLCVY 114



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 186 IFLYCNYYSFYSQKVLMALY 245
           +FL C YY + +  +L+ +Y
Sbjct: 280 LFLLCIYYFYCALIILLCIY 299


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 434 INVSKDTKVVTTINKFR 484
           ++V+KD  V +++N+FR
Sbjct: 46  VSVTKDQDVSSSVNRFR 62


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 284 TKGEQYSSWFLEINP 328
           T+  QY SWFL   P
Sbjct: 227 TQYSQYGSWFLPHQP 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,013
Number of Sequences: 336
Number of extensions: 2821
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)