Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0777
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical pr...    37   0.011
AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical ...    36   0.024
AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione ...    33   0.23 
Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical pr...    31   0.70 
AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical ...    31   0.70 
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z80217-3|CAB02289.1|  210|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL117195-19|CAB55031.1|  269|Caenorhabditis elegans Hypothetical...    27   8.6  

>Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical
           protein D1053.1 protein.
          Length = 214

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +2

Query: 248 KELDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL-EFYLDSDL 424
           K +D+E   VD+   E+  S   EINP  ++P   V   +I +S  I++YL E + D  L
Sbjct: 27  KNVDYEYKTVDLLS-EEAKSKLKEINPAAKVPTFVVDGQVITESLAIIEYLEETHPDVPL 85

Query: 425 VP 430
           +P
Sbjct: 86  LP 87


>AC006804-5|AAF60754.1|  213|Caenorhabditis elegans Hypothetical
           protein Y53G8B.1 protein.
          Length = 213

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +2

Query: 248 KELDFEPLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL-EFYLDSDL 424
           K++D+E   V++   +Q    F   NP  ++P+LK+    + +S  I++YL E Y D  L
Sbjct: 26  KKIDYEYQPVNLLN-KQKEQEFHGNNPAEKVPILKINGLTLTESMAIIEYLDEIYPDPPL 84

Query: 425 VP 430
           +P
Sbjct: 85  LP 86


>AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione
           s-transferase protein43 protein.
          Length = 214

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = +2

Query: 248 KELDFEPLIVDITKGE-QYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL-EFYLDSD 421
           K +D+E   +D+   E + ++ F++ NP  ++P L +    + +S  I++YL E Y D  
Sbjct: 25  KNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTLVINGLSLTESLAIIEYLDEAYPDPP 84

Query: 422 LVP 430
            +P
Sbjct: 85  FLP 87


>Z70718-6|CAA94677.1| 1029|Caenorhabditis elegans Hypothetical
           protein C04G2.6 protein.
          Length = 1029

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 327 GFISRNQEEYCSPFVMSTIKGSKSNSF 247
           G I RN  EYC   + ST+KG++ + F
Sbjct: 356 GIIKRNWREYCGMLLPSTVKGARRHLF 382


>AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical
           protein K10F12.4a protein.
          Length = 309

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 14/56 (25%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +2

Query: 266 PLIVDITKGEQYSSWFLEINPRGEIPVLKVKDALIPDSTRILDYL-EFYLDSDLVP 430
           P+ V     ++  +W+L  +P G +P L++   ++ +S  I++YL E +  + ++P
Sbjct: 123 PVEVVNVNPDRSPNWYLPKSPIGRVPALEINGKVVWESNVIVEYLDELFPTNTILP 178


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 344 VLKVKDAL-IPDSTRILDYLEFYLDSDLVPLINVSK 448
           +LK  D    P STRI DY E     +L+PL++V +
Sbjct: 303 ILKYSDFHNFPSSTRIFDYSEKSTTDELIPLLSVEQ 338


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
           protein T01H10.8 protein.
          Length = 2692

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 344 VLKVKDAL-IPDSTRILDYLEFYLDSDLVPLINVSK 448
           +LK  D    P STRI DY E     +L+PL++V +
Sbjct: 303 ILKYSDFHNFPSSTRIFDYSEKSTTDELIPLLSVEQ 338


>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 519 CYNSAGKASINSRNLFMVVTTFVSL 445
           C++   K +IN RNL +++TT V +
Sbjct: 116 CFHMVRKCTINERNLVVILTTHVDI 140


>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
           protein F29C12.3 protein.
          Length = 1631

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -2

Query: 519 CYNSAGKASINSRNLFMVVTTFVSL 445
           C++   K +IN RNL +++TT V +
Sbjct: 116 CFHMVRKCTINERNLVVILTTHVDI 140


>Z80217-8|CAB02294.1|  207|Caenorhabditis elegans Hypothetical
           protein F37B1.8 protein.
          Length = 207

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 323 NPRGEIPVLKVKDALIPDSTRILDYL 400
           +P G++P+L V    IP S  IL YL
Sbjct: 46  SPMGQLPILGVDGLEIPQSAAILRYL 71


>Z80217-3|CAB02289.1|  210|Caenorhabditis elegans Hypothetical
           protein F37B1.3 protein.
          Length = 210

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 326 PRGEIPVLKVKDALIPDSTRILDYL 400
           P G++PVL V D  IP S  I  YL
Sbjct: 49  PMGQLPVLTVDDFEIPQSAAINRYL 73


>AL117195-19|CAB55031.1|  269|Caenorhabditis elegans Hypothetical
           protein Y57A10A.26 protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 311 FLEINPRGEIPVLKVKDALIPDSTRILDYL-EFYLDSDLVPL 433
           F +++ RG+IP +++      DST I+D L E +  SDL  L
Sbjct: 55  FKKMSARGQIPFIELNGRQHADSTIIIDNLTEHFHKSDLEDL 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,872,885
Number of Sequences: 27780
Number of extensions: 248839
Number of successful extensions: 543
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)