Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0776
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    91   6e-21
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.61 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.3  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   7.6  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 91.5 bits (217), Expect = 6e-21
 Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
 Frame = +3

Query: 249 LTYSVKTDKATFKNQLYGCTDPYGLAGAWIAEAFNTSQYTFEVAPVFTLIELKVLNHILN 428
           +TYSVKT    F NQL+   DPYGL   W  +A N S YT+EV+PVF L+E  VL  +  
Sbjct: 123 VTYSVKTGHPYFVNQLFSAVDPYGLVAQWATDALNPSVYTYEVSPVFVLMEEVVLREMRA 182

Query: 429 LFGIP--NGDGIFSPGGSVSMLYALVAASLKLFPKSRGK 539
           + G     GDGIF PGGS++  YA+  A  +  P  + K
Sbjct: 183 IVGFEGGKGDGIFCPGGSIANGYAISCARYRFMPDIKKK 221



 Score = 74.1 bits (174), Expect = 1e-15
 Identities = 31/69 (44%), Positives = 51/69 (73%)
 Frame = +2

Query: 500 CS*FKAFPEVKRKGMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANEHGQMIV 679
           C+ ++  P++K+KG+ +LP +V+FTSED+HYSI+K A + G GT+++  I+ +  G+M V
Sbjct: 209 CARYRFMPDIKKKGLHSLPRLVLFTSEDAHYSIKKLASFQGIGTDNVYLIRTDARGRMDV 268

Query: 680 SELEKAIER 706
           S L + IER
Sbjct: 269 SHLVEEIER 277


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 13/53 (24%), Positives = 30/53 (56%)
 Frame = +2

Query: 557 EMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANEHGQMIVSELEKAIEREKK 715
           ++V +TS  SH S+ +A      G   +R ++ +++ ++    LE AI+ +++
Sbjct: 182 KLVAYTSAQSHSSVERAGL---LGGVKMRGLQPDDNNRLRGETLEVAIKEDRE 231


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 255 YSVKTDKATFKNQLYGCTDPYGLAG 329
           Y V+TD   F N      D Y LAG
Sbjct: 407 YDVQTDSILFVNNQPYSRDSYNLAG 431


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +1

Query: 400 SSKF*TIFSICSES 441
           SSKF T F ICSES
Sbjct: 355 SSKFRTGFIICSES 368


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 624 NPNQCAAFLIE 592
           NP  CA+F+IE
Sbjct: 207 NPKNCASFVIE 217


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/56 (21%), Positives = 26/56 (46%)
 Frame = +3

Query: 357 SQYTFEVAPVFTLIELKVLNHILNLFGIPNGDGIFSPGGSVSMLYALVAASLKLFP 524
           S +   +  V   I+ KV+  + ++FG  +    F+    +  L   +  +L++FP
Sbjct: 5   SSFFLSMMGVHQDIQDKVVQELYDIFGDSDRPATFADTLEMKYLERCLMETLRMFP 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,701
Number of Sequences: 336
Number of extensions: 3556
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)