Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0776
(716 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical... 74 9e-14
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 74 9e-14
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 74 9e-14
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 74 9e-14
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 33 0.20
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 33 0.20
AC006615-7|AAK68227.1| 450|Caenorhabditis elegans Hypothetical ... 29 4.4
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 28 5.8
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 5.8
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 5.8
Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical pr... 28 7.7
U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel t... 28 7.7
DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-t... 28 7.7
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 28 7.7
AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-t... 28 7.7
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 28 7.7
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 28 7.7
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 28 7.7
>AL032626-21|CAD45606.2| 433|Caenorhabditis elegans Hypothetical
protein Y37D8A.23c protein.
Length = 433
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +3
Query: 237 C*TSLTYSVKTDKATFKNQLYGCTDPYGLAGAWIAEAFNTSQYTFEVAPVFTLIELKVLN 416
C L V+T F NQ+ D +AG W+ NT+ +T+E+APVF L+E V+
Sbjct: 12 CEDVLRLGVRTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMA 71
Query: 417 HILNLFG--IPNGDGIFSPGGSVSMLYALVAASLKLFPKSR 533
+ G DGIF+PGG+++ LYA+ AA +L+P+S+
Sbjct: 72 RMWEAVGWDPEKADGIFAPGGAIANLYAMNAARHQLWPRSK 112
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 NVICSGCS*FKAFPEVKRKGMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANE 661
N+ + + +P K GM+++P + FTSEDSHYSI+ A+ LG G + I ++
Sbjct: 96 NLYAMNAARHQLWPRSKHLGMKDIPTLCCFTSEDSHYSIKSASAVLGIGADYCFNIPTDK 155
Query: 662 HGQMIVSELE-KAIEREKK 715
+G+MI LE K IE +K+
Sbjct: 156 NGKMIPEALEAKIIECKKE 174
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +3
Query: 237 C*TSLTYSVKTDKATFKNQLYGCTDPYGLAGAWIAEAFNTSQYTFEVAPVFTLIELKVLN 416
C L V+T F NQ+ D +AG W+ NT+ +T+E+APVF L+E V+
Sbjct: 87 CEDVLRLGVRTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMA 146
Query: 417 HILNLFG--IPNGDGIFSPGGSVSMLYALVAASLKLFPKSR 533
+ G DGIF+PGG+++ LYA+ AA +L+P+S+
Sbjct: 147 RMWEAVGWDPEKADGIFAPGGAIANLYAMNAARHQLWPRSK 187
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 NVICSGCS*FKAFPEVKRKGMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANE 661
N+ + + +P K GM+++P + FTSEDSHYSI+ A+ LG G + I ++
Sbjct: 171 NLYAMNAARHQLWPRSKHLGMKDIPTLCCFTSEDSHYSIKSASAVLGIGADYCFNIPTDK 230
Query: 662 HGQMIVSELE-KAIEREKK 715
+G+MI LE K IE +K+
Sbjct: 231 NGKMIPEALEAKIIECKKE 249
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/43 (30%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = +1
Query: 94 FLDRVLQI----VKDERKKDVPLVRFKHPEELEAILDLDIGQE 210
FL+R++Q+ +KD+ +D ++ F HP++++ ++DL I ++
Sbjct: 34 FLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMDLSIPEK 76
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +3
Query: 237 C*TSLTYSVKTDKATFKNQLYGCTDPYGLAGAWIAEAFNTSQYTFEVAPVFTLIELKVLN 416
C L V+T F NQ+ D +AG W+ NT+ +T+E+APVF L+E V+
Sbjct: 87 CEDVLRLGVRTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMA 146
Query: 417 HILNLFG--IPNGDGIFSPGGSVSMLYALVAASLKLFPKSR 533
+ G DGIF+PGG+++ LYA+ AA +L+P+S+
Sbjct: 147 RMWEAVGWDPEKADGIFAPGGAIANLYAMNAARHQLWPRSK 187
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 NVICSGCS*FKAFPEVKRKGMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANE 661
N+ + + +P K GM+++P + FTSEDSHYSI+ A+ LG G + I ++
Sbjct: 171 NLYAMNAARHQLWPRSKHLGMKDIPTLCCFTSEDSHYSIKSASAVLGIGADYCFNIPTDK 230
Query: 662 HGQMIVSELE-KAIEREKK 715
+G+MI LE K IE +K+
Sbjct: 231 NGKMIPEALEAKIIECKKE 249
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/43 (30%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = +1
Query: 94 FLDRVLQI----VKDERKKDVPLVRFKHPEELEAILDLDIGQE 210
FL+R++Q+ +KD+ +D ++ F HP++++ ++DL I ++
Sbjct: 34 FLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMDLSIPEK 76
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +3
Query: 237 C*TSLTYSVKTDKATFKNQLYGCTDPYGLAGAWIAEAFNTSQYTFEVAPVFTLIELKVLN 416
C L V+T F NQ+ D +AG W+ NT+ +T+E+APVF L+E V+
Sbjct: 87 CEDVLRLGVRTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMA 146
Query: 417 HILNLFG--IPNGDGIFSPGGSVSMLYALVAASLKLFPKSR 533
+ G DGIF+PGG+++ LYA+ AA +L+P+S+
Sbjct: 147 RMWEAVGWDPEKADGIFAPGGAIANLYAMNAARHQLWPRSK 187
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 NVICSGCS*FKAFPEVKRKGMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIKANE 661
N+ + + +P K GM+++P + FTSEDSHYSI+ A+ LG G + I ++
Sbjct: 171 NLYAMNAARHQLWPRSKHLGMKDIPTLCCFTSEDSHYSIKSASAVLGIGADYCFNIPTDK 230
Query: 662 HGQMIVSELE-KAIEREKK 715
+G+MI LE K IE +K+
Sbjct: 231 NGKMIPEALEAKIIECKKE 249
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/43 (30%), Positives = 30/43 (69%), Gaps = 4/43 (9%)
Frame = +1
Query: 94 FLDRVLQI----VKDERKKDVPLVRFKHPEELEAILDLDIGQE 210
FL+R++Q+ +KD+ +D ++ F HP++++ ++DL I ++
Sbjct: 34 FLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMDLSIPEK 76
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 539 GMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIK-ANEHGQMI--VSELEKAIERE 709
G R+LPE VIFT E+SH S+ ++ + PIK N +G + EL K +R
Sbjct: 384 GNRDLPEEVIFTKEESHSSLDSYSNHCNESQDD-EPIKMGNFNGSIAGNEKELSKTEQRA 442
Query: 710 KK 715
K+
Sbjct: 443 KR 444
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 33.1 bits (72), Expect = 0.20
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 539 GMRNLPEMVIFTSEDSHYSIRKAAHWLGFGTESLRPIK-ANEHGQMI--VSELEKAIERE 709
G R+LPE VIFT E+SH S+ ++ + PIK N +G + EL K +R
Sbjct: 384 GNRDLPEEVIFTKEESHSSLDSYSNHCNESQDD-EPIKMGNFNGSIAGNEKELSKTEQRA 442
Query: 710 KK 715
K+
Sbjct: 443 KR 444
>AC006615-7|AAK68227.1| 450|Caenorhabditis elegans Hypothetical
protein C36B7.1 protein.
Length = 450
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 414 NHILNLFGIPNGDGIFSPGGSVSMLYAL 497
NH L +F +PNG F G +S Y++
Sbjct: 106 NHELGIFTLPNGSYCFKEGDHISYRYSI 133
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 632 ESLRPIKANEHGQMIVSELEKAIE 703
E P K NE+GQ ++S+++ A+E
Sbjct: 2232 EDGNPYKTNENGQFVISDVDGAVE 2255
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 632 ESLRPIKANEHGQMIVSELEKAIE 703
E P K NE+GQ ++S+++ A+E
Sbjct: 2295 EDGNPYKTNENGQFVISDVDGAVE 2318
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 632 ESLRPIKANEHGQMIVSELEKAIE 703
E P K NE+GQ ++S+++ A+E
Sbjct: 2295 EDGNPYKTNENGQFVISDVDGAVE 2318
>Z35719-4|CAA84798.1| 279|Caenorhabditis elegans Hypothetical
protein F17C8.6 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 46 KHVCRVP*RLFKMD-LSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL D +SF D +L + +K + L EELE I++ ++ +
Sbjct: 67 KHMCHEMERLHNGDDVSFHDVLNMLSYRSVDIRKSLQLEELLQREELEYIIEEEVAKHTI 126
Query: 217 DDDLERCVRQV 249
LE C++ +
Sbjct: 127 RAWLENCLKNI 137
>U40419-4|AAA81424.3| 1785|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 2 protein.
Length = 1785
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 46 KHVCRVP*RLFKMD-LSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL D +SF D +L + +K + L EELE I++ ++ +
Sbjct: 1573 KHMCHEMERLHNGDDVSFHDVLNMLSYRSVDIRKSLQLEELLQREELEYIIEEEVAKHTI 1632
Query: 217 DDDLERCVRQV 249
LE C++ +
Sbjct: 1633 RAWLENCLKNI 1643
>DQ917241-1|ABI94564.1| 1763|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1763
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 46 KHVCRVP*RLFKMD-LSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL D +SF D +L + +K + L EELE I++ ++ +
Sbjct: 1551 KHMCHEMERLHNGDDVSFHDVLNMLSYRSVDIRKSLQLEELLQREELEYIIEEEVAKHTI 1610
Query: 217 DDDLERCVRQV 249
LE C++ +
Sbjct: 1611 RAWLENCLKNI 1621
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 46 KHVCRVP*RLFK-MDLSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL ++SF D +L + +K + L EELE I++ ++ ++
Sbjct: 1519 KHMCYEMERLHNGEEVSFHDVLYMLSYRSVDIRKSLQLEELLQREELEFIIEEEVAKQTI 1578
Query: 217 DDDLERCVRQVLHTASK 267
LE C+R++ + + K
Sbjct: 1579 RTWLEGCLRKMRNPSQK 1595
>AY555272-1|AAS65872.1| 1785|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1785
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 46 KHVCRVP*RLFKMD-LSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL D +SF D +L + +K + L EELE I++ ++ +
Sbjct: 1573 KHMCHEMERLHNGDDVSFHDVLNMLSYRSVDIRKSLQLEELLQREELEYIIEEEVAKHTI 1632
Query: 217 DDDLERCVRQV 249
LE C++ +
Sbjct: 1633 RAWLENCLKNI 1643
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 46 KHVCRVP*RLFK-MDLSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL ++SF D +L + +K + L EELE I++ ++ ++
Sbjct: 1553 KHMCYEMERLHNGEEVSFHDVLYMLSYRSVDIRKSLQLEELLQREELEFIIEEEVAKQTI 1612
Query: 217 DDDLERCVRQVLHTASK 267
LE C+R++ + + K
Sbjct: 1613 RTWLEGCLRKMRNPSQK 1629
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 46 KHVCRVP*RLFK-MDLSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL ++SF D +L + +K + L EELE I++ ++ ++
Sbjct: 1664 KHMCYEMERLHNGEEVSFHDVLYMLSYRSVDIRKSLQLEELLQREELEFIIEEEVAKQTI 1723
Query: 217 DDDLERCVRQVLHTASK 267
LE C+R++ + + K
Sbjct: 1724 RTWLEGCLRKMRNPSQK 1740
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 46 KHVCRVP*RLFK-MDLSFLD--RVLQIVKDERKKDVPLVRFKHPEELEAILDLDIGQEVN 216
KH+C RL ++SF D +L + +K + L EELE I++ ++ ++
Sbjct: 1583 KHMCYEMERLHNGEEVSFHDVLYMLSYRSVDIRKSLQLEELLQREELEFIIEEEVAKQTI 1642
Query: 217 DDDLERCVRQVLHTASK 267
LE C+R++ + + K
Sbjct: 1643 RTWLEGCLRKMRNPSQK 1659
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,140,189
Number of Sequences: 27780
Number of extensions: 327421
Number of successful extensions: 861
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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