Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0774
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.6  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   2.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.6  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 68  CRILKWSQGLHPYRSS 115
           C+++K+ Q L PY SS
Sbjct: 113 CKVVKYGQTLGPYLSS 128


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 301 TSSDLQRNLSSCTIG 257
           TS+ L+RNLSS  IG
Sbjct: 119 TSTGLRRNLSSLQIG 133


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 236 GSASCMPVARDFSPRDIDQRNR 171
           GS + + + +DF+  D+D+ +R
Sbjct: 172 GSRTPIEIPQDFTASDLDEEHR 193


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -3

Query: 444 SRWPHSSANPRQLCLAASRNPHVGARIDAS 355
           + W  S A+P++L +  +   H    +DAS
Sbjct: 238 THWILSGADPQKLAIGIAFYGHAFTLVDAS 267


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 204 LLTQGHRPTKQRVGLPYFEVQFFCHSNTGHD 112
           L+++G    K  VG+P++   F       HD
Sbjct: 853 LVSRGAPRGKLLVGVPFYGQSFTLTKGNNHD 883


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,252
Number of Sequences: 336
Number of extensions: 3104
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)