Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0774
         (515 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0768 + 5742938-5743196,5743291-5744729                           30   1.3  
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    30   1.3  
02_05_0690 - 30943184-30943305,30944048-30944459,30944549-309446...    29   2.2  
06_03_0940 + 26145746-26145879,26146740-26146821,26147349-261474...    29   2.9  
07_03_1316 + 25736931-25737206,25737276-25737329,25738036-257381...    28   3.9  
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557...    27   8.9  

>06_01_0768 + 5742938-5743196,5743291-5744729
          Length = 565

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 201 LTQGHRPTKQRVGLPYFEVQFFCHSNTGHDDRYGCNP*DHFKIRHGWLI 55
           L Q  RP      LPY  V    H  T HD  + C+   HF  R  WL+
Sbjct: 249 LVQSDRPATSVSELPYVFVDLD-HGCTYHDKLFYCDDERHFLHRAPWLL 296


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 201 EVPSDRHTASTPGGSTP-GNPIVQLDKFLCKSL-DVVEKSMPSIYMPPEEMYSETR 362
           E P   HT  TPG   P  NP     KF+   +  +V+K    I +PPE + S+TR
Sbjct: 588 ETPPASHTFPTPGVKIPDANPA----KFIPDVVRPMVDKPSRGIVIPPEAVESQTR 639


>02_05_0690 -
           30943184-30943305,30944048-30944459,30944549-30944610,
           30944724-30944787,30944880-30944947,30945039-30945168,
           30945276-30945341,30945794-30946369
          Length = 499

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +1

Query: 85  VSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALP 237
           V R+  I  V+S +   +K+  +     P FRW  S G+     G+ +A+P
Sbjct: 304 VRRLYDIANVLSSLNFIDKIQ-QADSRKPAFRWLGSAGKPKAENGVTIAVP 353


>06_03_0940 +
           26145746-26145879,26146740-26146821,26147349-26147427,
           26147527-26147624,26148392-26148479,26148589-26148686,
           26148881-26148982,26149237-26149281,26150535-26150574,
           26150988-26151074,26151254-26151330,26151746-26151808,
           26152650-26152766,26152905-26153116,26153690-26153785,
           26153869-26153935,26154028-26154081
          Length = 512

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 17/55 (30%), Positives = 30/55 (54%)
 Frame = +3

Query: 330 MPPEEMYSETRQYVLRRADSVTRLGTAVLDSRMNAATATVLDRALTTADKYVDKY 494
           M  EEM  + +QY+ R+   +T L  A+ + R   +T++V D AL  ++    +Y
Sbjct: 1   MEDEEMEKKVQQYLQRKGFRLTEL--ALQEERNRISTSSVSDVALARSENDPARY 53


>07_03_1316 +
           25736931-25737206,25737276-25737329,25738036-25738189,
           25740235-25740313,25740413-25740492,25740588-25740654,
           25741548-25741619,25742071-25742223,25742309-25742392,
           25742811-25742877
          Length = 361

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 399 LGTAVLDSRMNAATATVLDRALTTADKYVDKYLPPDNKT 515
           LGT   +SR+   TA  L        + VD Y+P D +T
Sbjct: 151 LGTCGFESRLQGTTADDLSPLFEKYGEVVDIYIPRDRRT 189


>11_08_0102 -
           28354880-28355056,28355159-28355376,28355634-28355712,
           28356451-28356519,28356602-28356681,28356818-28356925,
           28357103-28357169,28357894-28357959,28358042-28358119,
           28358198-28358250,28359542-28359575,28359851-28359865,
           28360082-28360109,28360628-28360716,28361688-28361810,
           28362192-28362296,28362381-28362485,28362924-28363139,
           28364656-28364845,28365193-28365418,28366096-28366162
          Length = 730

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/53 (26%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +3

Query: 267 QLDKFLCKSLDVVEKSMPSIYMPPEEMYSETRQYV--LRRADSVTRLGTAVLD 419
           +++KF+ K+LD  E  +  +Y+ PE++ S++++++  L +     RL    +D
Sbjct: 182 EVEKFVYKALDKGEGELKILYVTPEKI-SKSKRFMSKLEKCHHAGRLSLIAID 233


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,388,383
Number of Sequences: 37544
Number of extensions: 367637
Number of successful extensions: 1169
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)