Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0774
         (515 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   1.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.3  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   7.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   7.5  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 99  IHTDRRVRYWSDRKIVLQ 152
           I  DRR R+ SDR + L+
Sbjct: 335 IQNDRRTRHLSDRVVALE 352


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 102 HTDRRVRYWSDRKIVLQN 155
           H D R+RYW    +V+ +
Sbjct: 275 HNDGRLRYWRTPSVVVSD 292


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 165 QPSVSLVYVPG*EVPSDRHTASTPGGSTPG-NPIV 266
           +P  ++VY PG    + +     P G+T G N IV
Sbjct: 391 RPMHNVVYRPGENPVTQKREGGPPTGATTGPNEIV 425


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 165 QPSVSLVYVPG*EVPSDRHTASTPGGSTPG-NPIV 266
           +P  ++VY PG    + +     P G+T G N IV
Sbjct: 411 RPMHNVVYRPGENPVTQKREGGPPTGATTGPNEIV 445


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 165 QPSVSLVYVPG*EVPSDRHTASTPGGSTPG-NPIV 266
           +P  ++VY PG    + +     P G+T G N IV
Sbjct: 360 RPMHNVVYRPGENPVTQKREGGPPTGATTGPNEIV 394


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/22 (31%), Positives = 8/22 (36%)
 Frame = +2

Query: 236 RWFNSWKSDCTTGQVSLQVAGC 301
           RWF  W+    T    L    C
Sbjct: 30  RWFEIWRDSLPTKMRELNATAC 51


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 313 VCLQFICLQRRCTQRRVN 366
           V L F+    RCTQ +VN
Sbjct: 10  VLLTFLLHPSRCTQGKVN 27


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 313 VCLQFICLQRRCTQRRVN 366
           V L F+    RCTQ +VN
Sbjct: 10  VLLTFLLHPSRCTQGKVN 27


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,315
Number of Sequences: 438
Number of extensions: 3509
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)