Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0773
         (547 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0TXM8 Cluster: Putative uncharacterized protein; n=1; ...    37   0.35 
UniRef50_Q4WG31 Cluster: Putative uncharacterized protein; n=3; ...    33   3.3  
UniRef50_UPI000155C2AE Cluster: PREDICTED: similar to NRXNI; n=1...    32   7.5  
UniRef50_A4IAW2 Cluster: Putative uncharacterized protein; n=1; ...    32   7.5  
UniRef50_A6R5I4 Cluster: Predicted protein; n=2; cellular organi...    32   7.5  
UniRef50_Q9UHV7 Cluster: Mediator of RNA polymerase II transcrip...    32   7.5  
UniRef50_Q8A9Y9 Cluster: N-acetylglucosamine-6-phosphate deacety...    32   9.9  
UniRef50_A6FFD1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.9  
UniRef50_A5P3X2 Cluster: Regulatory protein, LacI; n=1; Methylob...    32   9.9  

>UniRef50_Q0TXM8 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 446

 Score = 36.7 bits (81), Expect = 0.35
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +3

Query: 147 ARSTPVTGRPGIAVPPGSALRIPLSHSLVPIQGKQISIVNLREIVPFRFC 296
           A +T +   PG  +PP  A  +P+S S +PI    +S V + E+ P R C
Sbjct: 71  ATTTTICSTPGAVIPPVGASTVPISSSALPIASTPVSTVAVSEL-PGRPC 119


>UniRef50_Q4WG31 Cluster: Putative uncharacterized protein; n=3;
           Pezizomycotina|Rep: Putative uncharacterized protein -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 1274

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 204 LRIPLSHSLVPIQGKQISIVNLREIVP--FRFCFSQKSMLCRICHWIKNST 350
           ++ P S   VPI   QI+I+ + E  P  + FCF+ +S  C  C W+  +T
Sbjct: 94  MQAPSSTFKVPIVSDQITILAVSERTPTYYDFCFADES--CNTCCWLARNT 142


>UniRef50_UPI000155C2AE Cluster: PREDICTED: similar to NRXNI; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           NRXNI - Ornithorhynchus anatinus
          Length = 417

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +3

Query: 168 GRPGIAVPPGSALRIP----LSHSLVPIQGKQISIVNLREIVPFR 290
           GRP +AV PGS   +P     S ++VPI+G  +++V    + P R
Sbjct: 307 GRPRLAVTPGSRFVVPSQTVSSETVVPIRGDVVALVPDGTVAPIR 351


>UniRef50_A4IAW2 Cluster: Putative uncharacterized protein; n=1;
           Leishmania infantum|Rep: Putative uncharacterized
           protein - Leishmania infantum
          Length = 105

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 209 NSFITLSGSYTRQTDFHSKLEGNRTLSVLFLAKEHALQNL 328
           N+ + L  S T  TD H++ E   TL  LF A  HAL  L
Sbjct: 23  NALVRLGTSSTHHTDVHAEDETKTTLPSLFSASAHALSLL 62


>UniRef50_A6R5I4 Cluster: Predicted protein; n=2; cellular
            organisms|Rep: Predicted protein - Ajellomyces capsulatus
            NAm1
          Length = 1564

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 203  PQNSFITLSGSYTRQTDFHSKLEGNRTLSVLF-LAKEHALQNLPLDQKFDPLR 358
            P  S +TLS  + + T   S+L+GNR+    + LA+  AL   PL    D LR
Sbjct: 1336 PNASTVTLSTPHPQGTQTRSRLDGNRSQPRFYPLAQATALPGTPLPPANDELR 1388


>UniRef50_Q9UHV7 Cluster: Mediator of RNA polymerase II transcription
            subunit 13; n=27; Eukaryota|Rep: Mediator of RNA
            polymerase II transcription subunit 13 - Homo sapiens
            (Human)
          Length = 2174

 Score = 32.3 bits (70), Expect = 7.5
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = +3

Query: 129  NDGMFGARSTPVTGRPGIAVPPGSALRIPLSHSLVPIQGKQISIVNLREIVPFRFCFSQK 308
            N  ++   STP T RP  +V P +   IP +HSL        S++NL     F+ C S  
Sbjct: 1038 NSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNL-----FKDCNSDS 1092

Query: 309  SMLCRICH 332
              +C +C+
Sbjct: 1093 CCIC-VCN 1099


>UniRef50_Q8A9Y9 Cluster: N-acetylglucosamine-6-phosphate
           deacetylase; n=17; Bacteroidales|Rep:
           N-acetylglucosamine-6-phosphate deacetylase -
           Bacteroides thetaiotaomicron
          Length = 390

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +2

Query: 77  YLKVPSLRDQYIKLI----FVKRWDVRGSLHSRHGSARHCSAAGI 199
           +LK P   ++Y+ L+     +KRWD+   LH  H  A++  + GI
Sbjct: 144 FLKTPD-ENEYVPLLEHTSCIKRWDISPELHGAHDFAKYTRSKGI 187


>UniRef50_A6FFD1 Cluster: Putative uncharacterized protein; n=1;
           Moritella sp. PE36|Rep: Putative uncharacterized protein
           - Moritella sp. PE36
          Length = 937

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = -2

Query: 159 EWSEPRTSHRFTKISL----IYWSLNEGTFRY*AEKNRYYTLILAKRPRSDTSDW 7
           EW   R S   T I L    ++WS+NEGT     +       I+ + P  D +DW
Sbjct: 365 EWKTLRQSFTGTMIELYMGQLHWSMNEGTNTLIEDHQNTGLSIVLQAPNYDVNDW 419


>UniRef50_A5P3X2 Cluster: Regulatory protein, LacI; n=1;
           Methylobacterium sp. 4-46|Rep: Regulatory protein, LacI
           - Methylobacterium sp. 4-46
          Length = 356

 Score = 31.9 bits (69), Expect = 9.9
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 110 IKLIFVKRWDVRGSLHSRHGSARHCSAAGIGPQNSFITLSG 232
           I LI V  WD++     + G     +AAGI P  S+I L G
Sbjct: 196 IGLIGVAEWDIQVGCERKGGYVEALAAAGIAPPPSWIALGG 236


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 516,646,749
Number of Sequences: 1657284
Number of extensions: 10066487
Number of successful extensions: 27711
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27704
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)