Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0773
(547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0653 + 5521635-5522387 31 0.60
07_01_0838 - 6811525-6812364,6813085-6813211,6813321-6813670 31 0.60
02_01_0412 - 3005600-3007759 30 1.0
10_05_0048 + 8529413-8530168,8546996-8547220 30 1.4
06_02_0198 - 12932526-12933032 29 2.4
03_05_1015 - 29722912-29723562 29 2.4
01_01_0012 + 71903-72935,73468-73981,74619-76008 29 2.4
08_02_0160 - 13423033-13423050,13426060-13426721,13428417-13428663 29 3.2
04_03_0068 - 10631827-10631947,10632037-10632112,10632152-106330... 29 3.2
10_01_0044 - 583349-584044 28 4.2
05_03_0167 - 9111581-9111694,9111864-9112358 28 4.2
03_05_0401 - 23819230-23819829,23822612-23823194,23823303-23824027 28 4.2
08_02_0073 + 11919938-11920060,11922325-11922939 28 5.6
06_01_0947 - 7303828-7304172,7304806-7304898,7304984-7305196,730... 28 5.6
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 5.6
12_02_0622 - 21299239-21299481,21299899-21299937 27 7.4
05_06_0206 + 26369089-26369143,26369627-26369733,26369814-263706... 27 7.4
06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258 27 9.8
>12_01_0653 + 5521635-5522387
Length = 250
Score = 31.1 bits (67), Expect = 0.60
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 361 PSQWVEF-LIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKGILRADPGGT 185
P Q EF Q+ L Q RKGT+ K+ +++ GT G ++ P G+
Sbjct: 42 PEQRQEFEATMQQVRDQYLSSFMQTRKGTLVQKYKIKVVADSPGTGSSKDGEVKQAPDGS 101
Query: 184 AMP 176
A P
Sbjct: 102 AQP 104
>07_01_0838 - 6811525-6812364,6813085-6813211,6813321-6813670
Length = 438
Score = 31.1 bits (67), Expect = 0.60
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 129 NDGMFGARST-PVTGRPGIAVPPGSALRIPLSHSLVP 236
N G+ GA T PV PG + PPG + + L + +P
Sbjct: 260 NSGVIGASPTLPVVQEPGTSTPPGLVMFLDLLNQAIP 296
>02_01_0412 - 3005600-3007759
Length = 719
Score = 30.3 bits (65), Expect = 1.0
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 197 IGPQNSFITLSGSYTRQTDFHSKL---EGNRTLSVLFLAKEHALQNLPLDQKFD 349
IG S I LS SY T+ + L + R LSVLF+ + +P D+K D
Sbjct: 394 IGNLKSIIFLSISYNNFTNITNTLHILKSLRNLSVLFMGSNFKNEAMPQDEKID 447
>10_05_0048 + 8529413-8530168,8546996-8547220
Length = 326
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -1
Query: 382 LSFSPD--LPSQWVEF-LIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKG 212
++ +PD P Q +F + Q L Q RKGT+ K+ +++ GT G
Sbjct: 35 VTITPDKLTPDQKKDFEAMMQQAGNQFLSSFMQTRKGTVVQKYKVKVVADVPGTGSSKDG 94
Query: 211 ILRADPGGTAMP 176
++ P G+A P
Sbjct: 95 EVKQAPDGSAQP 106
>06_02_0198 - 12932526-12933032
Length = 168
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -1
Query: 376 FSPDLPSQWVEFLIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKGILRAD 197
F+P+ ++ E +Q Q L Q RKGT+ K+ +++ GT ++
Sbjct: 40 FTPEKKEEF-EATLQ-QARDQFLNSFMQTRKGTLIQKYKIKVVADSPGTGSSKDREVKQA 97
Query: 196 PGGTAMP 176
PGG+A P
Sbjct: 98 PGGSAQP 104
>03_05_1015 - 29722912-29723562
Length = 216
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = -1
Query: 376 FSPDLPSQWVEFLIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKGILRAD 197
F+P+ +++ E +Q Q L Q +GT+ K+ +++ GT G ++
Sbjct: 8 FTPEQKAEF-EATLQ-QARDQFLNSFMQTHEGTLVQKYKIKVVTDSPGTGSSKDGEVKQA 65
Query: 196 PGGTAMP 176
PGG+A P
Sbjct: 66 PGGSAQP 72
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 289 GSVSRKRACFAESATGSKIRPTEKEDLARNSVNQVSDSS 405
GS SRK C + S R + ED R NQ++ SS
Sbjct: 860 GSKSRKDDCLLDDTLSSDRRKVQSEDSPRRKHNQLAASS 898
>08_02_0160 - 13423033-13423050,13426060-13426721,13428417-13428663
Length = 308
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -1
Query: 382 LSFSPD--LPSQWVEF-LIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKG 212
++ +PD P Q +F + Q L Q RKGT+ K+ +++ GT G
Sbjct: 86 VTITPDKLTPDQQKDFDAMMQQARNQFLNSFMQTRKGTVVQKYIVKVVADVPGTGSSKDG 145
Query: 211 ILRADPGGTAMP 176
+ P G+A P
Sbjct: 146 EGKQAPDGSAQP 157
>04_03_0068 -
10631827-10631947,10632037-10632112,10632152-10633021,
10650975-10651599
Length = 563
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -1
Query: 376 FSPDLPSQWVEFLIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKGILRAD 197
F+P+ ++ L Q Q L Q RKGT+ K+ +++ GT G +
Sbjct: 40 FTPEQKKEFEAMLQQAQ--DQFLNSFMQTRKGTLVQKYKIKVVADDPGTSSSKDGDGKQA 97
Query: 196 PGGTAMP 176
P G+A P
Sbjct: 98 PNGSAQP 104
>10_01_0044 - 583349-584044
Length = 231
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 295 QNRKGTISLKFTMEICLPCIGTRECDKGILRADPGGTAMP 176
Q RKGT+ K+ + + GT G ++ GG+A P
Sbjct: 66 QTRKGTVVQKYQVRVVADVPGTGSSKDGEMKQALGGSAQP 105
>05_03_0167 - 9111581-9111694,9111864-9112358
Length = 202
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 361 PSQWVEF-LIQWQILQSMLFCEKQNRKGTISLKFTMEICLPCIGTRECDKGILRADPGGT 185
P Q EF I Q L Q RKGT+ K+ +++ GT G + P G+
Sbjct: 42 PEQKKEFEAILQQARDQFLKSFMQTRKGTLVQKYKIKVVADDPGTSSSKDGDGKQAPDGS 101
Query: 184 AMP 176
A P
Sbjct: 102 AQP 104
>03_05_0401 - 23819230-23819829,23822612-23823194,23823303-23824027
Length = 635
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = -1
Query: 250 CLP-CIGTRECDKG---ILRADPGGTAMPGRPVTGVERAP 143
C P C G+ D G +L + GG+A P +P TG+ +P
Sbjct: 583 CSPGCGGSSWTDDGGAPLLSSRDGGSAQPAQPATGLSSSP 622
>08_02_0073 + 11919938-11920060,11922325-11922939
Length = 245
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 295 QNRKGTISLKFTMEICLPCIGTRECDKGILRADPGGTAMP 176
+ RKGT+ K+ +++ GT G ++ P G A P
Sbjct: 106 ETRKGTLVQKYKVKVIADVSGTGSSKDGEVKQAPDGVAQP 145
>06_01_0947 -
7303828-7304172,7304806-7304898,7304984-7305196,
7305318-7305409,7305726-7305818,7305871-7305955
Length = 306
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 355 QWVEFLIQWQILQSMLFCEKQNRKGTISLKF 263
QW + L W+ LQ M C+K N++ ++K+
Sbjct: 147 QWTQLLESWKSLQKMEMCQK-NKENRGNVKY 176
>05_04_0122 +
18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 27.9 bits (59), Expect = 5.6
Identities = 8/33 (24%), Positives = 17/33 (51%)
Frame = +3
Query: 234 PIQGKQISIVNLREIVPFRFCFSQKSMLCRICH 332
P+Q K+ ++ N + + C+ ++ C CH
Sbjct: 702 PLQAKEANLENKKNLQQLALCWDSRNFTCSHCH 734
>12_02_0622 - 21299239-21299481,21299899-21299937
Length = 93
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 159 PVTGRPGIAVPPGSALRIPLSHSLVP 236
PV RP + PP AL++P +H +P
Sbjct: 43 PVPARPRVDAPPLVALQLPPAHPSLP 68
>05_06_0206 +
26369089-26369143,26369627-26369733,26369814-26370647,
26370781-26370939,26371070-26371410,26373894-26373991,
26374244-26374350,26374715-26375266,26375366-26375524,
26375631-26376005
Length = 928
Score = 27.5 bits (58), Expect = 7.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 261 VNLREIVPFRFCFSQKSMLCRICHWIKNST 350
VNL+ + FC S KSM+ CH I+N+T
Sbjct: 412 VNLKNVKIIGFC-SAKSMVELTCHIIENAT 440
>06_03_1178 + 28203466-28204590,28204745-28205652,28206189-28206258
Length = 700
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 204 GPIPAALQCRADP*REWSEPRTSHRFTKISLIYWSLNE 91
G +PA + CR R ++P T F KI L+ NE
Sbjct: 64 GRVPALVLCRVAGVRFMADPDTDEVFAKIRLVPVRANE 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,826,499
Number of Sequences: 37544
Number of extensions: 274673
Number of successful extensions: 837
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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