Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0773
         (547 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putat...    28   3.5  
At5g48290.1 68418.m05964 heavy-metal-associated domain-containin...    28   4.7  
At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5 ...    28   4.7  
At3g66652.1 68416.m00776 fip1 motif-containing protein contains ...    27   6.2  
At1g75310.1 68414.m08748 DNAJ heat shock N-terminal domain-conta...    27   6.2  
At5g54060.1 68418.m06723 glycosyltransferase family protein cont...    27   8.2  
At5g42750.1 68418.m05206 expressed protein                             27   8.2  
At2g03020.2 68415.m00255 heat shock protein-related Prosite PS00...    27   8.2  
At1g20150.1 68414.m02520 subtilase family protein similar to sub...    27   8.2  

>At4g25970.1 68417.m03737 phosphatidylserine decarboxylase, putative
           similar to SP|P53037 Phosphatidylserine decarboxylase
           proenzyme 2 precursor (EC 4.1.1.65) {Saccharomyces
           cerevisiae}; contains Pfam profile PF02666:
           phosphatidylserine decarboxylase
          Length = 635

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
 Frame = -1

Query: 238 IGTRECDKGILRADPGGTAMPGRPVTGVERAPNIPS---FYKNQFNI 107
           IG R  D+G        +   G+ +  VE A NIPS   F+K+Q N+
Sbjct: 354 IGLRLMDQGAKEILQNLSEKQGKKMNSVESAQNIPSFLEFFKDQINM 400


>At5g48290.1 68418.m05964 heavy-metal-associated domain-containing
           protein strong similarity to farnesylated proteins ATFP4
           [GI:4097549] and ATFP5 [GI:4097551]; contains Pfam
           profile PF00403: Heavy-metal-associated domain
          Length = 181

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 283 PFGSVSRKRACFAESATGSKIRPTEKED 366
           P   + RK+  FAE  + +K+ P +KED
Sbjct: 54  PLIQILRKKVAFAELVSVTKVEPPKKED 81


>At5g18230.1 68418.m02139 transcription regulator NOT2/NOT3/NOT5
           family protein contains Pfam domain PF04153: NOT2 / NOT3
           / NOT5 family
          Length = 843

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +3

Query: 135 GMFGARSTPVTGRPGIAVPPG--SALRIPLSHSLVPIQ 242
           G+  A STP  GRP + VP G  S   + LS S +P Q
Sbjct: 306 GLHSAPSTPAGGRPSLNVPAGNVSNTSVTLSTS-IPTQ 342


>At3g66652.1 68416.m00776 fip1 motif-containing protein contains
           Pfam profile PF05182: Fip1 motif
          Length = 980

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 6/32 (18%)
 Frame = +2

Query: 119 IFVKRWDVRGSLHSRH------GSARHCSAAG 196
           I +KR +  G++HSRH       S RHC  AG
Sbjct: 395 ISIKRGEDSGTMHSRHRRSHEDSSKRHCGRAG 426


>At1g75310.1 68414.m08748 DNAJ heat shock N-terminal
           domain-containing protein low similarity to SP|Q27974
           Auxilin {Bos taurus}; contains Pfam profile PF00226:
           DnaJ domain
          Length = 1448

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 280 YPFGSVSRKRACFAESATGSKIRPTEKEDLARNSVNQVS 396
           Y FG +  K  C  E+ TGSK+   +++       + V+
Sbjct: 490 YTFGQLGSKLKCVVEAFTGSKVSQKDEKQFTEKENSTVT 528


>At5g54060.1 68418.m06723 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 468

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 391 PGSLSFSPDLPSQWVEFLIQWQILQSMLFCEKQNRKGTISLKFTMEICL 245
           PGS    P L  QW E+L ++    S++FC   ++     +    E+CL
Sbjct: 252 PGSQPNQPSLDPQWAEWLAKFN-HGSVVFCAFGSQPVVNKIDQFQELCL 299


>At5g42750.1 68418.m05206 expressed protein
          Length = 337

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = +2

Query: 104 QYIKLIFVKRWDVRGSLHSRHGSARHCSAAGIGPQ-NSFITLSGSYTRQ 247
           +YI+++F KR +     + R  S+   S++ +GP  NS   ++GSY ++
Sbjct: 210 KYIRMLFQKRGNGTQFWNRRQTSSYSFSSSLMGPNGNSKTMINGSYNKR 258


>At2g03020.2 68415.m00255 heat shock protein-related Prosite
           PS00430: TonB-dependent receptor proteins signature 1;
           contains some similar to Small heat shock protein,
           chloroplast precursor (SP:P30222) {Petunia hybrida}
          Length = 247

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 124 CKTMGCSGLAPLPSRVGPALQ 186
           C  +GCSG    P+  GP LQ
Sbjct: 129 CTVLGCSGFREDPALTGPVLQ 149


>At1g20150.1 68414.m02520 subtilase family protein similar to
           subtilisin-type protease precursor GI:14150446 from
           [Glycine max]
          Length = 780

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 199 DPGGTAMPGRPVTGVERAPNIPSF 128
           +P  T MP R  TG   AP+IPSF
Sbjct: 475 EPIATIMPTRSRTGHMLAPSIPSF 498


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,073,093
Number of Sequences: 28952
Number of extensions: 219290
Number of successful extensions: 557
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)