Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0772
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   3.0  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   4.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.0  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 438 EKSNKLKLLILSFLSHSLNRFYTEKPCKY 524
           EK  ++   ++ FLSH+  + + E   KY
Sbjct: 75  EKQKEMTKKVIHFLSHNKQQMWKELTAKY 103


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 429 KTLFLGFQVICLNEKEFSSSC 367
           KT+ LG ++   NE+E +S C
Sbjct: 308 KTVLLGVKIDICNEEERNSHC 328


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -1

Query: 79  DSSKLSVLGNFREIFKFLCREIDKI 5
           DS KLS + N   +   + RE DKI
Sbjct: 51  DSVKLSKIPNNVNLMDVVAREFDKI 75


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/33 (30%), Positives = 13/33 (39%)
 Frame = -1

Query: 316 FTWPSGLPKCDISTTDLAPLSKHIXRNLRQLQC 218
           F  P+G   C + T D   L     R   + QC
Sbjct: 765 FLIPTGFDSCTVCTCDAKYLEIKCKRIYNEKQC 797


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,403
Number of Sequences: 336
Number of extensions: 3018
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)