Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0772
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerat... 75 4e-14
Z74475-6|CAA98961.1| 299|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL023811-2|CAA19423.1| 299|Caenorhabditis elegans Hypothetical ... 29 2.3
AF016441-7|AAB65908.1| 344|Caenorhabditis elegans Hypothetical ... 29 3.0
U58734-4|AAB52501.1| 274|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 28 7.0
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 28 7.0
AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine re... 27 9.2
AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical... 27 9.2
>U88169-9|AAB42230.1| 417|Caenorhabditis elegans Phosphoglycerate
kinase protein 1 protein.
Length = 417
Score = 75.4 bits (177), Expect = 4e-14
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1
Query: 109 ALNKLSIDALNLTGKRVLMRVDFNVPLKEGVITNNQRIVAALDSXKYALIKALNQLYL 282
+LNKL+ID LNL GKRVL+RVDFNVPLK+G ITNNQRI AA+ + ++AL + L
Sbjct: 3 SLNKLAIDQLNLAGKRVLIRVDFNVPLKDGKITNNQRIAAAVPTIQHALSNGAKSVVL 60
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = +3
Query: 261 GAKSVVLMSHLGRPDGQVNLKYTLKTVAEE 350
GAKSVVLMSHLGRPDG+ KYTLK VAEE
Sbjct: 54 GAKSVVLMSHLGRPDGRRQDKYTLKPVAEE 83
>Z74475-6|CAA98961.1| 299|Caenorhabditis elegans Hypothetical
protein C51F7.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -2
Query: 537 VKLENICMVFLYKIYSMNETRKTKLIVLTCYFFPYIKTLFL---GFQVICLNEKE 382
V L + ++F Y I+ + T L +L YF P++ T + F + LNE +
Sbjct: 108 VSLNRLTVLFKYNIFEPIWKKITWLFILVAYFVPFLNTHIIFQNKFTIDYLNESD 162
>AL023811-2|CAA19423.1| 299|Caenorhabditis elegans Hypothetical
protein C51F7.2 protein.
Length = 299
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -2
Query: 537 VKLENICMVFLYKIYSMNETRKTKLIVLTCYFFPYIKTLFL---GFQVICLNEKE 382
V L + ++F Y I+ + T L +L YF P++ T + F + LNE +
Sbjct: 108 VSLNRLTVLFKYNIFEPIWKKITWLFILVAYFVPFLNTHIIFQNKFTIDYLNESD 162
>AF016441-7|AAB65908.1| 344|Caenorhabditis elegans Hypothetical
protein M03F8.1 protein.
Length = 344
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/43 (27%), Positives = 26/43 (60%)
Frame = -2
Query: 585 LESVFMHLVISPNIPNVKLENICMVFLYKIYSMNETRKTKLIV 457
++ V+ +SP + ++L I ++FL +Y +N+T+ L+V
Sbjct: 275 VDHVYCDTFVSPKVCFLELACIGILFLNNLYDVNQTQNLHLVV 317
>U58734-4|AAB52501.1| 274|Caenorhabditis elegans Hypothetical
protein T27A10.2 protein.
Length = 274
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 612 IFRLVFQFRLESVFMHLVISPNIPNVKLENICMVFLYKIYSMN 484
I +L F R F ++ P+ N K ++C FLY+I MN
Sbjct: 200 ICQLYFSLRSFPRFTGFML-PSCKNFKFRDLCWFFLYEILPMN 241
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 489 MNETRKTKLIVLTCYFFPYIKTLFLGFQVICLNE 388
M ETRKT LI + CY +LF+G + L E
Sbjct: 301 MQETRKTTLIDILCY-LGGASSLFMGCSCVTLME 333
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2
Query: 489 MNETRKTKLIVLTCYFFPYIKTLFLGFQVICLNE 388
M ETRKT LI + CY +LF+G + L E
Sbjct: 301 MQETRKTTLIDILCY-LGGASSLFMGCSCVTLME 333
>AC024799-6|AAK72315.1| 306|Caenorhabditis elegans Serpentine
receptor, class x protein5 protein.
Length = 306
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 447 YFFPYIKTLFLGFQVICLNEKEFSSSCSAIF 355
Y F + +TLFL F +I L FS++C+ F
Sbjct: 118 YIFTFRRTLFLFFVIIALT--SFSAACTQYF 146
>AC006722-5|AAK68410.3| 703|Caenorhabditis elegans Hypothetical
protein Y19D10A.10 protein.
Length = 703
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 486 NETRKTKLIV-LTCYFFPYIKTLFLGFQVICLNE 388
N+TR +I+ L C F I TL F VIC+ +
Sbjct: 273 NKTRMFIMILTLACLTFIQINTLLFNFTVICMED 306
>AC006645-10|AAF39849.1| 746|Caenorhabditis elegans Hypothetical
protein F56A4.11 protein.
Length = 746
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 486 NETRKTKLIV-LTCYFFPYIKTLFLGFQVICLNE 388
N+TR +I+ L C F I TL F VIC+ +
Sbjct: 316 NKTRMFIMILTLACLTFIQINTLLFNFTVICMED 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,975,420
Number of Sequences: 27780
Number of extensions: 270955
Number of successful extensions: 617
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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