Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0770
         (729 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0590 + 4376785-4377009,4378153-4378407,4378514-4378641,437...    29   2.9  
05_05_0357 + 24377989-24378039,24378601-24378632,24378724-243788...    29   3.8  
12_01_0384 + 3012359-3012404,3012641-3012825,3013014-3013045,301...    29   5.0  
07_03_0393 - 17630097-17630367,17630483-17630709                       28   8.7  
01_01_1096 - 8659091-8659459,8660730-8661050,8661416-8661694,866...    28   8.7  

>02_01_0590 +
           4376785-4377009,4378153-4378407,4378514-4378641,
           4378738-4378779,4378875-4378956,4379035-4379103,
           4379180-4379350,4379430-4379495,4379777-4379845,
           4379928-4380056,4380845-4380881,4380906-4380997,
           4381541-4381602,4381855-4381918
          Length = 496

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 226 STDTMHTGNENISRFLTIYWEVIQGMKLKYHKGNT-YIILPAHCHLSCLHLLKGN 387
           S D ++  +E +    TI  + + G    + +G T +II+P     SC HL+K +
Sbjct: 71  SEDDVNHASEEVKMMSTIDHDNLLGAYCSFTEGETLWIIMPYMAGGSCFHLMKSS 125


>05_05_0357 +
           24377989-24378039,24378601-24378632,24378724-24378818,
           24379165-24379237,24379804-24379867,24380465-24380732,
           24381132-24381202,24382028-24382084,24382302-24382403,
           24382544-24382588,24383616-24383693,24384350-24384400,
           24384475-24384556,24384883-24384956,24386093-24386144,
           24386230-24386288,24386380-24386456,24386692-24386778,
           24387011-24387101
          Length = 502

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -2

Query: 410 DSVSDITMFPFKR*RQDRWQCAGKIIYVFPLWYF 309
           DSV+ I+ +PF R    R +CA  +I +F LW++
Sbjct: 149 DSVAQISFYPFIRNDIIRTKCANVLISMF-LWFY 181


>12_01_0384 +
           3012359-3012404,3012641-3012825,3013014-3013045,
           3013387-3013514,3013695-3013940,3014200-3014284,
           3014369-3014387,3014563-3014667
          Length = 281

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 449 NQDGIYSNKCIGFESQSILQEPIHIQLEKTFCCFCCASP 565
           NQD  Y +  +G   Q      +  QL+K   C+CC +P
Sbjct: 205 NQDLPYDSASMGIILQRSEDNLVQGQLKKCITCYCCWNP 243


>07_03_0393 - 17630097-17630367,17630483-17630709
          Length = 165

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +2

Query: 557 ASPPLAVDVQAPVSGYCPGQVIPLKIDI 640
           + P L  D  +P+   C G+V+P+K+++
Sbjct: 105 SDPNLGADNASPLLSDCTGEVVPVKVEL 132


>01_01_1096 -
           8659091-8659459,8660730-8661050,8661416-8661694,
           8661781-8661897,8662142-8662210,8663204-8663397,
           8663552-8663633
          Length = 476

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +3

Query: 303 EIEIPQGKHIYNFTCT--LPPVLPSSFEGEHGYVRYTVKVTLDRP 431
           E+  P+  ++ N  C    P   P ++  ++GY RY V    D P
Sbjct: 335 ELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHP 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,970,762
Number of Sequences: 37544
Number of extensions: 459585
Number of successful extensions: 1031
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)