Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0770
(729 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) 66 4e-11
SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_14465| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_46489| Best HMM Match : Lig_chan (HMM E-Value=0.072) 30 1.7
SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 30 2.2
SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 29 3.9
SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33) 29 3.9
SB_32825| Best HMM Match : A_deaminase (HMM E-Value=0.68) 28 6.7
>SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +3
Query: 315 PQGKHIYNFTCTLPPV-LPSSFEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINALDLN 491
P G++ Y F+ +P LP+SFEG G+VRY +K +DRPW+FD TK AF++I +D+N
Sbjct: 96 PPGEYSYPFSFIIPQQNLPTSFEGNFGHVRYWLKAIIDRPWRFDVTTKAAFSMIEFVDIN 155
Score = 35.1 bits (77), Expect = 0.059
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +1
Query: 49 IYLDNQWNTYYAGQTVNGRIEYVFDSPKKVRGIHVKIKGEAHTELYESKQEENAQGKTES 228
I L + +Y G+ +NG + + K RGI ++ GEA+ ES + G
Sbjct: 9 ITLTGEKRVFYPGEVLNGSVYLKLNKELKTRGIRLEFHGEANVRWSES----SGSGNNRR 64
Query: 229 TDTMHTGNENISRFLTIY 282
T T I+ T+Y
Sbjct: 65 TRTYRNQEVYINTVATLY 82
>SB_14467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 352
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 321 GKHIYNFTCTLPPV-LPSSFEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINALDLN 491
G+H F+ +PP LPSSFE HG+VRY ++ + RPW+FD+ TK+ VI+ +D+N
Sbjct: 126 GRHALEFSFKIPPFSLPSSFESTHGHVRYYLRARISRPWRFDEVTKLQVHVIDLIDVN 183
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 512 PIHIQLEKTFCCFCCASP-PLAVDVQAPVSGYCPGQVIPLKIDIENKSHVQLHLVKIFLR 688
P+ + +K C C + PL V S YCPG+ + L +I N + + ++L
Sbjct: 190 PVFGEAQKALNCLCNGTAAPLHALVYTDRSAYCPGERLTLTTEIRNFPLREPYETCVYLV 249
Query: 689 KVVTYRAT 712
+ +TY+++
Sbjct: 250 QSITYKSS 257
>SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30)
Length = 173
Score = 65.7 bits (153), Expect = 4e-11
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +3
Query: 321 GKHIYNFTCTLPPV-LPSSFEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINALDLN 491
G+H F+ +PP LPSSFE HG+VRY ++ + RPW+FD+ TK+ VI+ +D+N
Sbjct: 111 GRHALEFSFKIPPFSLPSSFESTHGHVRYYLRARISRPWRFDEVTKLQVHVIDLIDVN 168
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +1
Query: 49 IYLDNQWNTYYAGQTVNGRIEYVFDSPKKVRGIHVKIKGEAHTELYESKQEENAQGKTE- 225
I L+ + Y+ G+ V+G K R +HV+ GEA T E + E
Sbjct: 9 IVLNRKNRIYHPGEVVSGECVVYSKESLKFRSVHVEFHGEARTNWDEMENYTTTHKNEEV 68
Query: 226 --STDTMHTGNENISRFLTIY 282
+ T N ++ R + IY
Sbjct: 69 YFNKKTSLLANVHLYRAVLIY 89
>SB_1624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Frame = +3
Query: 321 GKHIYNFTCTLP--PVLPSSFEGEHGYVRYTVKVTLDRPWKFDQETKMAFTVINALDLN- 491
G++ Y F+ LP LP ++E +HGY++Y+++ +DRP +T TVI+ ++++
Sbjct: 88 GEYKYPFSFELPFDGDLPGTYEAKHGYIKYSLEALIDRPLMTPAKTGTLITVIDYVEIDK 147
Query: 492 --LNPSYKNQS 518
L P K ++
Sbjct: 148 TLLEPRQKQEN 158
>SB_14465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 34.7 bits (76), Expect = 0.078
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 512 PIHIQLEKTFCCFCCASP-PLAVDVQAPVSGYCPGQVIPLKIDIENKSHVQLHLVKIFLR 688
P+ + +K C C + PL V S YCPG+ + L +I N + + ++L
Sbjct: 2 PVFGEAQKALNCLCNGTAAPLHALVYTDRSAYCPGERLTLTTEIRNLPLREPYETCVYLV 61
Query: 689 KVVTYRAT 712
+ +TY+++
Sbjct: 62 QSITYKSS 69
>SB_46489| Best HMM Match : Lig_chan (HMM E-Value=0.072)
Length = 327
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 550 LLRITTFSSGCAGSCIWVLSRSSNTFE 630
++ +T +G AG CIW+L R+SN +
Sbjct: 55 VIGLTLILTGIAGICIWLLDRNSNPID 81
>SB_13852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 846
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = +2
Query: 416 NIRQTMEI*SGNQDGIYSNKCIGFESQSILQEPIHIQLEKTFCCFCCASP 565
N QT + N + N FE S LQE +Q F C C++P
Sbjct: 176 NFVQTQKSPHNNDPSVIKNISKSFEGSSTLQEKHPMQPPSDFVCSMCSAP 225
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 617 LDLDSTQIQEPAHPLLKVVMRSKNSRTSFLIECGLVLVRWIEIQIQCIYYCK 462
L LD+ +I +L V++ T + E + + +EI IQCIY C+
Sbjct: 1360 LVLDTAKIMPGRSYVLTVIVEKGKRSTRYEQEVDIARGKKLEILIQCIYNCR 1411
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 313 YHKGNTYIILPAHCHLSCLH-LLKGNMVMSDT 405
YHK ++PA+ ++SC H L +G +V DT
Sbjct: 1921 YHKAELARLVPAYAYISCKHSLQEGGIVEHDT 1952
>SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -2
Query: 338 IIYVFP--LWYFNFIPCITSQ*IVRNLEIFSFPVCIVSVDSVLP*AFSSCLLSY 183
IIYV ++YF + P ++R L + FP+ + V +L F S + Y
Sbjct: 131 IIYVVAALVFYFKYFPSTWKDRVIRTLPLLVFPLVVYGVKRLLHYMFVSRMAKY 184
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = -2
Query: 683 KIFLQDEVGHGSYFQCLFSKVLLDLDSTQIQEPAHPLLKVVMRSKNSR 540
++ +++ +G + C F +V + ++QE H LLK + R++ +
Sbjct: 177 RVDIEEGLGFSNELDCTFYEVSISEGYNEVQELLHELLKRITRNRGEK 224
>SB_9795| Best HMM Match : FF (HMM E-Value=2.3e-33)
Length = 693
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 109 EYVFDSPKKVRGIHVKIKGEAHTELYESKQEENAQGKTESTDTMHTGNENIS 264
E ++ PK++ + KIK EA E E +E + + E T + ++ S
Sbjct: 231 ESIWTEPKELTELKEKIKAEAEAENQEEGEESEEEEEEEKPATQNEAKQDTS 282
>SB_32825| Best HMM Match : A_deaminase (HMM E-Value=0.68)
Length = 123
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -2
Query: 683 KIFLQ-DEVGHGSYFQCLFSKVLLDLDSTQIQEPAHPLLKVVMRSKN 546
+IFL+ D G YF L +V++DL+ ++ Q A P + + RS N
Sbjct: 7 EIFLKTDNYIDGRYFAQLMKEVMVDLEESKYQN-AEPRISIYGRSIN 52
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,334,767
Number of Sequences: 59808
Number of extensions: 542590
Number of successful extensions: 1288
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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