Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0769
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0057 + 22410167-22411330 33 0.17
07_03_1448 - 26593041-26593266,26593417-26593442,26593906-265939... 31 0.39
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 31 0.68
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 31 0.68
06_02_0203 + 12986685-12988691 30 0.90
03_02_1016 + 13228113-13228964 30 0.90
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.2
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 29 2.1
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 2.1
08_02_1296 - 25951758-25951983,25952134-25952159,25952626-259527... 29 2.1
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 29 2.1
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 29 2.7
03_05_0875 - 28434894-28435082,28435173-28435247,28435399-284354... 29 2.7
01_06_0241 - 27813076-27813622,27813695-27814125 29 2.7
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 28 3.6
07_01_1139 - 10684647-10685837,10685877-10686251,10686351-106865... 28 4.8
05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836... 28 4.8
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 4.8
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 4.8
11_06_0610 - 25449085-25453284 27 6.3
10_08_0190 + 15607241-15607409,15607932-15607990,15608883-156089... 27 6.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 27 6.3
07_03_0860 + 22057309-22058453,22059833-22059964,22060328-220604... 27 6.3
03_06_0078 + 31505126-31507933 27 6.3
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 27 8.4
11_08_0047 - 27991007-27991308,27991522-27991555 27 8.4
07_01_0665 + 5001599-5003149 27 8.4
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 27 8.4
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 27 8.4
01_05_0160 + 18751512-18751960,18752082-18752553 27 8.4
01_03_0276 - 14489847-14489921,14490144-14490240,14491480-144915... 27 8.4
>04_04_0057 + 22410167-22411330
Length = 387
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/70 (25%), Positives = 26/70 (37%)
Frame = +3
Query: 261 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 440
P A + P RC S PP P + + D++ +D RKE RS
Sbjct: 187 PPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSE 246
Query: 441 EGKEQIPERH 470
++P H
Sbjct: 247 RRAARLPRSH 256
>07_03_1448 -
26593041-26593266,26593417-26593442,26593906-26593990,
26594098-26594229,26594307-26594450,26594524-26594582,
26594651-26594957,26595482-26595563,26595640-26595773,
26595858-26595951,26596022-26596145,26596407-26596466
Length = 490
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/87 (20%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 208 H*EDPEVFIRRYREVCSSQLKHTE----TQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKT 375
H + P I +V ++QL H++ ++EK P + K H+ +++ + ++
Sbjct: 330 HIDQPSPAIANTIQVATNQLYHSQQVDLSKEKQPSTEFSPGQNSKRHKKVMEASTNGEEN 389
Query: 376 QMKHTTTEEKNPLPPIEVIEAEKEKNK 456
Q++ ++ P E ++ + EKN+
Sbjct: 390 QLQQPKIADQQPSGHKEQMDQQPEKNR 416
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 30.7 bits (66), Expect = 0.68
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Frame = +3
Query: 258 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGR----S*TLRQDSDEAHDDGRKESTAPDR 425
E R G G+R ESPP P + S +DS E D +E+ P
Sbjct: 60 EEESRSRRHGHHRDGGRRSLSPSESPPPPAAKRERSSSRAPRDSVERRDSADREAPPPSS 119
Query: 426 SYRSGE---GKEQIPERHRELRS 485
R G G E PE + R+
Sbjct: 120 RKRKGHEGGGNESDPEGGKRARA 142
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 30.7 bits (66), Expect = 0.68
Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Frame = +3
Query: 75 TLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSL 254
TLPP + SP SP T SSK TP+ S S+ L S L RS +
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS--GSLSVSRAPASALASRRSHSGEIPLPS 88
Query: 255 FEPAE----AHRDSGEEPASGQRCCRSGESP 335
P HR +G P C S SP
Sbjct: 89 DGPPRGSRPGHRRTGSGPLIFTSCSSSATSP 119
>06_02_0203 + 12986685-12988691
Length = 668
Score = 30.3 bits (65), Expect = 0.90
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 295 PLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 396
P+P+ + +AA++AH N G EH K + TTT
Sbjct: 505 PVPNSNAIAADEAHGNATAG-EHDKKETAEQTTT 537
>03_02_1016 + 13228113-13228964
Length = 283
Score = 30.3 bits (65), Expect = 0.90
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 258 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHD 392
E A AH +G + A+ +R C SG P P RS T HD
Sbjct: 214 EAARAHASNGGKHAAARR-CSSGNHQPVPRARSTTGMDSLGHGHD 257
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 113 DLKSQLEGFNTSCLRDVDTNEKIVL 187
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 352 RPRGSGGLSPLRQHLCPEAGSSPESRCASAG 260
R RG+ G+ LR L P A +SP ++ A+ G
Sbjct: 54 RRRGAHGVRALRPLLLPRASASPSAKTAAGG 84
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 120 RVSSKASTPAVSVTSTPMKRLCFR 191
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>08_02_1296 -
25951758-25951983,25952134-25952159,25952626-25952710,
25952828-25952959,25953037-25953180,25953254-25953312,
25953381-25953687,25954211-25954292,25954369-25954502,
25954587-25954680,25954751-25954874,25955136-25955195
Length = 490
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/87 (20%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +1
Query: 208 H*EDPEVFIRRYREVCSSQLKHTE----TQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKT 375
H + P I +V ++QL H + ++EK P + K H+ + + + ++
Sbjct: 330 HIDQPSPAIANTIQVATNQLYHPQQVDLSKEKQPSTEFSPGQNSKCHKKVTETSTNGEEN 389
Query: 376 QMKHTTTEEKNPLPPIEVIEAEKEKNK 456
Q++ ++ P E ++ + EKN+
Sbjct: 390 QLQQPKIADQQPSGHKEQMDQQPEKNR 416
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 99 PRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSLFEPAEAHR 278
P P ++ A+TP + T +P KR+C L++ +P R R + + + + P
Sbjct: 120 PPPPPPVVTAAAATTPTAAPTPSPAKRVC--LVRLTPTLR-RGAAAAIHKGRWVPVRLPL 176
Query: 279 DSGEEPASGQRCC 317
S + A+ R C
Sbjct: 177 PSLQPRAAAYRFC 189
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = +3
Query: 201 TSPLRRPRSLYSTVSRSLFEPA----EAHRDSGEEPASGQ--RCCRSGESPPEPLGRS*T 362
T P +RP + + +S E E+ +SG+EP + SG + P P
Sbjct: 302 TIPAKRPLTKDTKKGQSKDESEDSSDESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKE 361
Query: 363 LRQDSDEAHDDGRKESTAPDRSYRSGEGKE 452
+ D + DD ES+ D + + K+
Sbjct: 362 ISSDDESDEDDSSDESSDEDVKQKQTQAKK 391
>03_05_0875 -
28434894-28435082,28435173-28435247,28435399-28435490,
28435721-28435835,28436019-28436188,28436237-28436310,
28436397-28436553,28436658-28436730,28436898-28436960,
28437067-28437341,28437710-28437816,28437884-28438788,
28439742-28440032
Length = 861
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 232 IRRYREVCSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKH 387
I R+ ++C+S+ KH + ++ L +K V A+ G FD+ H
Sbjct: 225 IGRHTDICNSEEKHLDERKHGSLVEKKVDLHGLAYHERRSGDGRFDQKASAH 276
>01_06_0241 - 27813076-27813622,27813695-27814125
Length = 325
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 366 RQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH 488
R + + H+ ++S +RS+R+ ++ + HR RSH
Sbjct: 21 RVEPEANHESANQQSHHSNRSHRTASRNAEVEQPHRSNRSH 61
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 333 PPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 467
PP P GR RQ + DG+ + D S RS +G P++
Sbjct: 89 PPPPRGRRRVTRQFWNAGDYDGKPDLLGGDPSLRSDDGGGMDPDK 133
>07_01_1139 -
10684647-10685837,10685877-10686251,10686351-10686534,
10686699-10686895
Length = 648
Score = 27.9 bits (59), Expect = 4.8
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Frame = +1
Query: 244 REVCSSQLKHTETQEKNPLPDKD----VVAAEKAHQN--LLDGVEHFDKTQMKHTTTEEK 405
+E C +QL + + P D+ V +K H N LLD ++ K
Sbjct: 336 QEYCDTQLLSFPQRGRKPSVDEQFARFVEVIQKIHINVPLLDAMQVRTYVHYLKYILNNK 395
Query: 406 NPLPPIEVIEAEKEKNKFL 462
PLP EV++ K+ +K +
Sbjct: 396 RPLPTTEVVKLTKQCSKVI 414
>05_07_0128 +
27879969-27880143,27880232-27881323,27883562-27883698,
27884179-27884409,27884707-27884730
Length = 552
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 331 LSPLRQHLCPEAGSSPESRCASAGSNKLLDTVE*RLLGLLSGDVFS 194
L+P R+HL SS S S+GS+K + LL + D+FS
Sbjct: 169 LTPPRRHLLAATSSSSSSSDRSSGSSKSVKPAAAALLTSAAIDLFS 214
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 89 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 181
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 89 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 181
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.5 bits (58), Expect = 6.3
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Frame = +3
Query: 60 PAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYST 239
P+P + PP SP +P+ SKAS P TP K++P +S +
Sbjct: 574 PSPPKSGPPAGESPPTPE-----SKASPPPTPEEYTPSPP------KSTPPAE-KSPPTP 621
Query: 240 VSRSLFEPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAP 419
S++ P A G P+ + S +SPP P ++ + + E H +ST P
Sbjct: 622 ESKASSPPPPA--PEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPP 679
Query: 420 -DRSYRSGEGKEQIP 461
++S + E + P
Sbjct: 680 TEKSPPTPESESSSP 694
>10_08_0190 +
15607241-15607409,15607932-15607990,15608883-15608991,
15609394-15609551,15609976-15610044,15610158-15610847,
15611112-15611629,15611725-15611789,15613010-15613089,
15613894-15613998,15614768-15614881,15615029-15615168,
15615257-15615385,15615903-15616055,15616186-15616327
Length = 899
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -2
Query: 243 IPSNKDFWVFSVATSSADGSTIFSLVSTSRRQLVL 139
+PSN+ + ++ TSS++GS FSL +++ + L
Sbjct: 500 LPSNESWDYYASRTSSSNGSVYFSLQNSTNSDMDL 534
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 24 PLPHQKYIDSQWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKR 179
P P I +++PAP PP ++S R+P SSK P P R
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANR 702
>07_03_0860 + 22057309-22058453,22059833-22059964,22060328-22060412,
22061666-22061867,22062273-22062344,22062509-22062573,
22062682-22062741,22063033-22064379,22064463-22064607,
22064688-22067442,22068540-22068630,22068655-22068873
Length = 2105
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 301 PDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLP---PIEVIEAEKEKNKFLNGI 471
P +DVV+ + + GV + + K + EK+P P P++ + A E + +
Sbjct: 937 PAEDVVSHRQKDNEAVSGVRKSGENESKASPITEKHPTPVSQPLQALAANPETTAAASFV 996
Query: 472 ENFDP 486
N P
Sbjct: 997 VNSVP 1001
>03_06_0078 + 31505126-31507933
Length = 935
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 289 KNPLPDKDVVAAEKAHQNLLDGVEH-FDKTQMKHTTTEEKNPLPPIEVIEAEKEKN 453
++P+PD VV+ + A +++ +EH D T+ + KN + PI+V E E++++
Sbjct: 557 RSPIPDNHVVSFDAAVRSVSQELEHGKDFTEEDCSQNGIKN-VVPIKVSEIEEDQD 611
>12_01_0433 -
3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 276 RDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 455
R G+ A G+ + E+P R+ D+D A DG KE A D + + ++Q
Sbjct: 136 RVGGDAAAEGEP---AAEAPRRRSRRNAVNSSDADGAEGDGAKEGEAVDNKRKQRQKQKQ 192
Query: 456 I 458
+
Sbjct: 193 V 193
>11_08_0047 - 27991007-27991308,27991522-27991555
Length = 111
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 352 GVEHFDKTQMKHTTTEEKNPLPPIEVIEAEKE 447
GV + D M E P PP+++ EA+ E
Sbjct: 45 GVSYMDTRNMARNEHEGSTPSPPVQMYEADWE 76
>07_01_0665 + 5001599-5003149
Length = 516
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 367 DKTQMKHTTTEEKNPLPPIEVIEAEKEKNKF-LNGIENF 480
D K+ T +K PP E E +KE +K L+G+ NF
Sbjct: 342 DAAAAKNDTDGDKKESPPSEEEEKDKEGSKVTLSGVLNF 380
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 27.1 bits (57), Expect = 8.4
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 261 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 440
P E ++DS + S + ESP S + S +HDD R+ T PD S R+G
Sbjct: 1312 PGEPYQDSNKTDPSTP--VPTSESPIRDKAGSGLFKTIS--SHDDCREPLT-PDSSCRAG 1366
Query: 441 EGKEQIPERHRELR 482
E P + +R
Sbjct: 1367 SPLESPPRASKRIR 1380
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 62 CSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVL--PSAEDVATEK 217
C + DT +K PK+ +D+K Q+E + + + + + +V+ + +DV +E+
Sbjct: 355 CDIEDT-LIKSNPKLTSDVKVQVEAEDMAMMLQLKPEDFVVVLDENGKDVTSEQ 407
>01_05_0160 + 18751512-18751960,18752082-18752553
Length = 306
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -2
Query: 462 QEFVLFLLRFDNFDRGQWILFFRRRVLHLSLVEVFNSVQEVLV 334
+E LFLL D F +G W R V+ + +V + Q+ +
Sbjct: 147 EEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 189
>01_03_0276 -
14489847-14489921,14490144-14490240,14491480-14491546,
14491748-14491877,14491995-14492152,14493004-14493235,
14493760-14493895,14493982-14494085,14495709-14495987
Length = 425
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 244 REVCSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPL 414
R C + K + + P P K+ VA A + G+E F K ++K + +N L
Sbjct: 49 RRRCVLRSKASSSPSPPPSPGKEAVAVPTAESCVNLGLELFSKGRVKDALEQFENAL 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,235,419
Number of Sequences: 37544
Number of extensions: 323787
Number of successful extensions: 1334
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1328
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -