SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0767
         (775 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc...   163   3e-41
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc...   160   2e-40
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas...   159   3e-40
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa...   158   7e-40
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ...   145   7e-36
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas...   124   1e-29
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21...   119   5e-28
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch...   115   9e-27
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc...   111   1e-25
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch...    97   2e-21
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces...    25   9.1  

>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
           Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score =  163 bits (396), Expect = 3e-41
 Identities = 69/85 (81%), Positives = 81/85 (95%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           VCGDIHGQF+DL ELFK+GGDVP+ NYLFMGD+VDRG++SVET  LL+A+K+RYP+RIT+
Sbjct: 67  VCGDIHGQFHDLMELFKIGGDVPDMNYLFMGDYVDRGYHSVETVSLLVAMKLRYPNRITI 126

Query: 434 IRGNHESRQITQVYGFYDECLRKYG 508
           +RGNHESRQITQVYGFYDECLRKYG
Sbjct: 127 LRGNHESRQITQVYGFYDECLRKYG 151



 Score =  144 bits (349), Expect = 1e-35
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = +1

Query: 508 SITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDL 687
           S  VW++ T +FDY  L+A+I+ RIFC+HGGLSPSI +LD +RT+DR QEVPH+GPMCDL
Sbjct: 152 SANVWKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDL 211

Query: 688 LWSDPEDTQGWGVSPRGAGYLFGSD 762
           LWSDP+D  GWG+SPRGAGY FG D
Sbjct: 212 LWSDPDDRCGWGISPRGAGYTFGQD 236



 Score = 62.9 bits (146), Expect = 5e-11
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +3

Query: 102 NMSDTSDLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVT 254
           N +   D+DR IEQLK+CE + EA+V+ LC KARE+L +E+NVQ V +PVT
Sbjct: 16  NDATLGDVDRWIEQLKKCEPLSEADVEMLCDKAREVLCQENNVQPVRNPVT 66


>SPBC26H8.05c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 348

 Score =  160 bits (389), Expect = 2e-40
 Identities = 65/85 (76%), Positives = 76/85 (89%)
 Frame = +1

Query: 508 SITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDL 687
           S  VWRYC EIFDYLSL A++DG++FCVHGGLSPSI ++DQIR +DRKQEVPH+G MCDL
Sbjct: 135 SANVWRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDL 194

Query: 688 LWSDPEDTQGWGVSPRGAGYLFGSD 762
           LWSDPED  GWG+SPRGAG+LFG+D
Sbjct: 195 LWSDPEDISGWGLSPRGAGFLFGAD 219



 Score =  156 bits (378), Expect = 4e-39
 Identities = 67/85 (78%), Positives = 75/85 (88%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           +CGDIHGQ +DL ELF++GG  P T YLF+GDFVDRGFYSVETFLLLL LK +YP  +TL
Sbjct: 50  ICGDIHGQLHDLLELFRIGGSCPGTKYLFLGDFVDRGFYSVETFLLLLTLKCKYPKEMTL 109

Query: 434 IRGNHESRQITQVYGFYDECLRKYG 508
           IRGNHESRQITQVYGFYDEC+RKYG
Sbjct: 110 IRGNHESRQITQVYGFYDECVRKYG 134



 Score = 52.4 bits (120), Expect = 7e-08
 Identities = 23/45 (51%), Positives = 33/45 (73%)
 Frame = +3

Query: 120 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVT 254
           DLD Q+E+L+   +I E+ V  LC + R+IL+EESN+Q + SPVT
Sbjct: 5   DLDWQLEELENGRLIPESNVVELCQRVRDILIEESNIQWISSPVT 49


>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
           Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 305

 Score =  159 bits (387), Expect = 3e-40
 Identities = 67/85 (78%), Positives = 77/85 (90%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           VCGDIHGQFYDL ELF+VGG++P TNY+FMGDFVDRG++S+ETF L + LK RYPD+ITL
Sbjct: 48  VCGDIHGQFYDLLELFRVGGELPSTNYIFMGDFVDRGYFSLETFTLFMLLKARYPDKITL 107

Query: 434 IRGNHESRQITQVYGFYDECLRKYG 508
           +RGNHESRQITQVYGFYDEC  KYG
Sbjct: 108 LRGNHESRQITQVYGFYDECQTKYG 132



 Score =  137 bits (331), Expect = 2e-33
 Identities = 53/81 (65%), Positives = 68/81 (83%)
 Frame = +1

Query: 517 VWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDLLWS 696
           VW+YC ++FD+L+L+A+ID +I CVHGGLSP + TLDQIR + R QE+PH+G  CDL+WS
Sbjct: 136 VWKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWS 195

Query: 697 DPEDTQGWGVSPRGAGYLFGS 759
           DPED + W VSPRGAG+LFGS
Sbjct: 196 DPEDIESWTVSPRGAGWLFGS 216



 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 20/45 (44%), Positives = 31/45 (68%)
 Frame = +3

Query: 120 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVT 254
           DLD  I  +++C+ + E ++K LC   + IL+EESN+Q V +PVT
Sbjct: 3   DLDEWIATVRKCKYLPEHQLKRLCEMVKVILMEESNIQPVRTPVT 47


>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
           Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score =  158 bits (384), Expect = 7e-40
 Identities = 67/85 (78%), Positives = 77/85 (90%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           VCGDIHGQF+DL ELF +GG  P+TNYLFMGD+VDRG++SVET  LL+A K+RYP RIT+
Sbjct: 54  VCGDIHGQFHDLMELFNIGGPSPDTNYLFMGDYVDRGYHSVETVSLLIAFKIRYPQRITI 113

Query: 434 IRGNHESRQITQVYGFYDECLRKYG 508
           +RGNHESRQITQVYGFYDECLRKYG
Sbjct: 114 LRGNHESRQITQVYGFYDECLRKYG 138



 Score =  145 bits (351), Expect = 7e-36
 Identities = 58/82 (70%), Positives = 71/82 (86%)
 Frame = +1

Query: 517 VWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDLLWS 696
           VW+Y T++FDYL L+A+I+ RIFC+HGGLSPSI TLD +R +DR QEVPH+GP+CDLLWS
Sbjct: 142 VWQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWS 201

Query: 697 DPEDTQGWGVSPRGAGYLFGSD 762
           DP+D  GWG+SPRGAGY FG D
Sbjct: 202 DPDDRPGWGISPRGAGYTFGPD 223



 Score = 50.0 bits (114), Expect = 4e-07
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +3

Query: 120 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVT 254
           ++DR IEQL RCE + E +V  +C  A+E+L  ESNVQ V  PVT
Sbjct: 9   EVDRWIEQLSRCEPLSEEDVIQMCDLAKEVLSVESNVQSVRCPVT 53


>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 307

 Score =  145 bits (351), Expect = 7e-36
 Identities = 66/98 (67%), Positives = 77/98 (78%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           V GDIHGQF DL E+F++GG  P TNYLF+GD+VDRG+YS+ET  LL+ LK+RYP RITL
Sbjct: 48  VVGDIHGQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITL 107

Query: 434 IRGNHESRQITQVYGFYDECLRKYGPSLCGDTVQKYLT 547
           +RGNHESR ITQ YGFY ECLRKYG +     V KY T
Sbjct: 108 LRGNHESRGITQTYGFYSECLRKYGNA----NVWKYFT 141



 Score =  117 bits (281), Expect = 2e-27
 Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
 Frame = +1

Query: 517 VWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDLLWS 696
           VW+Y T+IFD+L+LSA ID  IFCVHGGLSPSI  +DQI  +DR +E PH+GPM DL+WS
Sbjct: 136 VWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQILVLDRFREFPHEGPMADLVWS 195

Query: 697 DPE-DTQGWGVSPRGAGYLFG 756
           DP+   Q + +SPRGAG+ FG
Sbjct: 196 DPDPSVQEFSLSPRGAGFSFG 216



 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 21/47 (44%), Positives = 34/47 (72%)
 Frame = +3

Query: 120 DLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVTFV 260
           DLD  IE+L   ++I E+ +  LC+ A+E+L++ESNV R+ +P+T V
Sbjct: 3   DLDNIIERLYEKQLIAESVIAYLCSLAKEVLMQESNVVRLSTPITVV 49


>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
           PP1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score =  124 bits (300), Expect = 1e-29
 Identities = 53/106 (50%), Positives = 73/106 (68%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           +CGDIHGQ+YDL  LF+ GG  PE NYLF+GD+VDRG  S+E   LLLA K++YP+   +
Sbjct: 60  ICGDIHGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFI 119

Query: 434 IRGNHESRQITQVYGFYDECLRKYGPSLCGDTVQKYLTIYHCQPLS 571
           +RGNHE   I ++YGFYDEC R+Y   L     + +   ++C P++
Sbjct: 120 LRGNHECASINRIYGFYDECKRRYNIKLW----KTFTDCFNCLPIA 161



 Score = 97.9 bits (233), Expect = 1e-21
 Identities = 42/87 (48%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
 Frame = +1

Query: 505 WSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCD 684
           ++I +W+  T+ F+ L ++AIID +IF +HGGLSP ++++DQI+ I R  +VP  G +CD
Sbjct: 143 YNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQIQRIMRPTDVPDTGLLCD 202

Query: 685 LLWSDPE-DTQGWGVSPRGAGYLFGSD 762
           LLWSDP+ D  GWG + RG  + FG D
Sbjct: 203 LLWSDPDKDLTGWGDNDRGVSFTFGPD 229



 Score = 27.5 bits (58), Expect = 2.3
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 162 IMEAEVKALCAKAREILVEESNVQRVDSPV 251
           + E E++ LC KAREI + +  +  +++P+
Sbjct: 29  LSEDEIRFLCNKAREIFISQPILLELEAPL 58


>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
           Sds21|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 322

 Score =  119 bits (286), Expect = 5e-28
 Identities = 51/106 (48%), Positives = 71/106 (66%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           +CGDIHGQ+ DL  LF+ GG  P+ NYLF+GD+VDRG  S+E   LL A K++YP+   L
Sbjct: 57  ICGDIHGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFL 116

Query: 434 IRGNHESRQITQVYGFYDECLRKYGPSLCGDTVQKYLTIYHCQPLS 571
           +RGNHE   I ++YGFYDEC R+Y   L     + +   ++C P++
Sbjct: 117 LRGNHEFASINRIYGFYDECKRRYSIKLW----KTFTDCFNCMPVA 158



 Score =  104 bits (250), Expect = 1e-23
 Identities = 43/87 (49%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
 Frame = +1

Query: 505 WSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCD 684
           +SI +W+  T+ F+ + ++A+ID +IFC+HGGLSP +++LDQI+ I R  ++P  G +CD
Sbjct: 140 YSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQIQRIIRPTDIPDTGLLCD 199

Query: 685 LLWSDPE-DTQGWGVSPRGAGYLFGSD 762
           L+WSDPE D  GWG + RG  Y FG+D
Sbjct: 200 LVWSDPEKDLTGWGENDRGVSYTFGAD 226


>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
           Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 515

 Score =  115 bits (276), Expect = 9e-27
 Identities = 52/107 (48%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           + GD+HGQ+ DL  LF++ G  P +NYLF+GD+VDRG  S+ET LLL   K+RYP+   L
Sbjct: 245 IVGDVHGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFL 304

Query: 434 IRGNHESRQITQVYGFYDECLRKYGPSLCGDTVQK-YLTIYHCQPLS 571
           +RGNHE   IT+VYGFYDEC R+     C   + K ++  ++C P++
Sbjct: 305 LRGNHECANITRVYGFYDECKRR-----CNIKIWKTFINTFNCLPIA 346



 Score = 85.8 bits (203), Expect = 6e-18
 Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
 Frame = +1

Query: 508 SITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCDL 687
           +I +W+     F+ L +++++ G+IFCVHGGLSPS+  +D IR I R  +VP  G + DL
Sbjct: 329 NIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDDIREIPRPTDVPDYGLLNDL 388

Query: 688 LWSDPEDTQG-WGVSPRGAGYLFGSD 762
           LWSDP DT+  W  + RG  ++F  +
Sbjct: 389 LWSDPADTENDWEDNERGVSFVFNKN 414


>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
           Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 554

 Score =  111 bits (266), Expect = 1e-25
 Identities = 47/84 (55%), Positives = 61/84 (72%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITL 433
           VCGDIHGQ+YDL +LF+VGG+   T YLF+GD+VDRG++S+E  L L ALK+ YP  + L
Sbjct: 116 VCGDIHGQYYDLMKLFEVGGNPANTQYLFLGDYVDRGYFSIECLLYLWALKIWYPKTLWL 175

Query: 434 IRGNHESRQITQVYGFYDECLRKY 505
           +RGNHE   +T  + F  EC  KY
Sbjct: 176 LRGNHECAHLTDYFTFKLECTHKY 199



 Score = 79.4 bits (187), Expect = 5e-16
 Identities = 36/71 (50%), Positives = 49/71 (69%)
 Frame = +1

Query: 505 WSITVWRYCTEIFDYLSLSAIIDGRIFCVHGGLSPSIHTLDQIRTIDRKQEVPHDGPMCD 684
           ++I V+  C + F+ L L+AI++ +  CVHGGLSP +HTL+ IR I+R  E P  G MCD
Sbjct: 199 YNIKVYEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCD 258

Query: 685 LLWSDPEDTQG 717
           LLWSDP +  G
Sbjct: 259 LLWSDPLEDFG 269



 Score = 27.9 bits (59), Expect = 1.7
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +3

Query: 102 NMSDTSDLDRQIEQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDSPVT 254
           N  D  DL        R   + E +   +  KA EIL  E N+  VD+PVT
Sbjct: 65  NEPDKPDLHFLRNHFIREGRLSEEQTLYIIKKATEILKSEDNLIEVDAPVT 115


>SPBC3F6.01c |||serine/threonine protein phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 473

 Score = 97.5 bits (232), Expect = 2e-21
 Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
 Frame = +2

Query: 254 VCGDIHGQFYDLKELFKVGGDVPETN-YLFMGDFVDRGFYSVETFLLLLALKVRYPDRIT 430
           +CGD HGQ++DL  +FK+ G    TN YLF GDFVDRG +S E    L A K+ YPD + 
Sbjct: 214 ICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRGSWSTEVAFTLYAYKLLYPDAVF 273

Query: 431 LIRGNHESRQITQVYGFYDECLRKY 505
           + RGNHE+  + +VYGF  EC  KY
Sbjct: 274 INRGNHETDDMNKVYGFEGECRSKY 298



 Score = 63.7 bits (148), Expect = 3e-11
 Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = +1

Query: 532 TEIFDYLSLSAIIDGRIFCVHGGL-SPSIHTLDQIRTIDR--KQEVPHDGPMCDLLWSDP 702
           +E F  L L ++I      VHGGL S    TLDQ+R IDR  K++    G M ++LW+DP
Sbjct: 307 SETFSLLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP 366

Query: 703 EDTQGWGVSPRGAGYLFGSD 762
           +   G G S RG G  FG D
Sbjct: 367 QPAPGRGPSKRGVGLQFGPD 386


>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 815

 Score = 25.4 bits (53), Expect = 9.1
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 769 ATNLSQRDSQLLLVKHPNLVYLQDHS 692
           A  L ++D + L   +P LVYL DH+
Sbjct: 247 AKKLYEKDRERLAKVNPKLVYLVDHA 272


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,261,282
Number of Sequences: 5004
Number of extensions: 69914
Number of successful extensions: 234
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -