Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0762
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0031 - 187798-187887,187996-188179,188468-188640,188917-18... 50 2e-06
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 31 1.2
05_03_0328 - 12468142-12468262,12468443-12468641,12468758-124689... 29 3.8
03_05_1105 + 30438140-30438350,30438448-30438926 29 3.8
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 29 5.0
09_06_0310 - 22212348-22212695,22213561-22213766,22213796-222139... 29 5.0
05_03_0261 + 11214086-11214148,11215019-11215462,11216504-112166... 29 5.0
09_04_0268 - 16253312-16253358,16253618-16253789,16253881-162543... 28 6.6
07_01_0839 + 6823028-6823074,6823449-6823992,6827017-6828258 28 6.6
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 28 6.6
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619... 28 6.6
09_04_0362 - 16953108-16953155,16953478-16953562,16953626-169537... 28 8.7
08_02_1533 + 27677553-27678257 28 8.7
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 28 8.7
05_07_0015 + 27065104-27065428,27065539-27066257 28 8.7
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 28 8.7
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 28 8.7
>02_01_0031 -
187798-187887,187996-188179,188468-188640,188917-189399,
189557-190213,190821-190837,191501-192041
Length = 714
Score = 50.0 bits (114), Expect = 2e-06
Identities = 19/56 (33%), Positives = 38/56 (67%)
Frame = +1
Query: 91 MAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVN 258
MA+ V R+E M +EL+ + R L+T E+ E+ ++R++FE+ ++RR + D+++
Sbjct: 1 MADAVQYRLERMSDELDDLERRGLFTRAELAEVVRRRRDFEFRLRRRSPLRSDFLD 56
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Frame = +2
Query: 509 PQMWLMASKWESLEQNNLENAKAFLLKGIQRNPDAEPLYLELFNIELIDL----CFKAET 676
P +W+ A+ WE + N+ A+A + G++ P++E +++E +EL L K
Sbjct: 199 PGLWIYAAAWEFDQNLNVAAARALMQTGLRSCPESEDMWIEYLRMELTYLNKLKARKVAL 258
Query: 677 DEEKEKLQKK 706
E+ + LQKK
Sbjct: 259 GEDVKTLQKK 268
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 58 CNKSNIKI*IKMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQK 198
CN++ + + + +Q+ +IEN+ NE + + N D+E+ QK
Sbjct: 757 CNEAKLSVLSEEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQK 803
>05_03_0328 -
12468142-12468262,12468443-12468641,12468758-12468974,
12469896-12469994,12470843-12470899,12470943-12472577
Length = 775
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 512 QMWLMASKWESLEQNNLENAKAFLLKGIQRNPDAEPLYLELFNIEL 649
+MWLMA+++E + Q NL+ A+ L I +P + ++ + IEL
Sbjct: 439 KMWLMAAQFE-IRQRNLKAARQILGNAIGMSPKGK-IFKKYIEIEL 482
>03_05_1105 + 30438140-30438350,30438448-30438926
Length = 229
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 163 ISLFFSFAPTHLSYSQYVDLLVQPFLFISLYYFYYTK 53
++LFF P ++ Y+ L++ PF+ + Y+YY +
Sbjct: 47 VALFFVSTPA--GFALYIFLIILPFIVLCPLYYYYQR 81
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 97 EQVNQRIENMINELEQMRRTNLYTDEEI-KEISQKRKEFEYHIQRRVKQKEDYVNTSLMN 273
EQ ++ ++ E + R+T EE K++S +K+F+ + + +K+K D N + +
Sbjct: 295 EQAHEEEAQILAEKDVTRKTYKQALEEAEKKLSSLKKDFDPAVYKSLKEKLDETNLEISS 354
Query: 274 L 276
+
Sbjct: 355 M 355
>09_06_0310 -
22212348-22212695,22213561-22213766,22213796-22213905,
22214351-22214427,22214466-22214486,22214518-22215651
Length = 631
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 109 QRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVNT 261
QR+ ++ ELE+ RR +E + E ++KR E + + V +K D + T
Sbjct: 47 QRLHDLAAELEEERRLRRKAEESLAE-AEKRSERVKALAQNVLRKHDDLKT 96
>05_03_0261 +
11214086-11214148,11215019-11215462,11216504-11216666,
11218145-11218441,11218842-11218858
Length = 327
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +1
Query: 97 EQVNQRIENMINELE------QMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYV 255
+ V+Q+I N+ +E + R +EEI+E QK +E E I + + +++Y+
Sbjct: 141 QMVHQQIANLFSEFDIPFAAAHSRSFETMVNEEIEENIQKTREIESEIVKHSETEKEYI 199
>09_04_0268 -
16253312-16253358,16253618-16253789,16253881-16254359,
16255723-16255801,16255918-16255923
Length = 260
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 88 KMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFE 213
K E+V Q +EN + ++ ++ T +T+EE+ +I RKEFE
Sbjct: 56 KQIEEVAQ-VENSSDNVQSVQDTVKFTEEEVDKI---RKEFE 93
>07_01_0839 + 6823028-6823074,6823449-6823992,6827017-6828258
Length = 610
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 545 LEQNNLENAKAFLLKGIQRNPDAEPLYLELF 637
+ +E A +FLL + NPD +PL+ F
Sbjct: 498 VNSGEVEKADSFLLNVAEENPDRKPLFTSYF 528
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 97 EQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFE-YH--IQRRVKQKED 249
E + ++ + E EQ+ + +EE K+++ ++K E +H ++R+K +ED
Sbjct: 499 EDLRKQRQKFEEEWEQLDEKRTHLEEEAKKLNNEKKNLERWHDNEEKRLKDRED 552
>02_02_0028 +
6196453-6196512,6196936-6197320,6197843-6197925,
6198060-6198183,6198404-6198523,6198595-6198755,
6198999-6199157,6199272-6199434,6199604-6199729,
6199775-6199900,6200400-6200764,6201204-6201404,
6201685-6201794,6201919-6202003,6202553-6202681,
6202763-6202868,6202984-6203072,6203172-6203474
Length = 964
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 405 EIEIYFEYIKFCKGV-GFQQAI-SGIIGQML 491
+ EIYF+Y+ +C V G+ I SG++G+ L
Sbjct: 461 DYEIYFDYLAYCASVTGYFYIIGSGLLGEFL 491
>09_04_0362 -
16953108-16953155,16953478-16953562,16953626-16953702,
16954601-16954641,16955140-16955644,16955897-16956316
Length = 391
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 446 CGVSTGYLRYHRTNVADTW 502
CG+ Y RYH TN W
Sbjct: 340 CGIDASYSRYHLTNARCAW 358
>08_02_1533 + 27677553-27678257
Length = 234
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 620 MAQHQGFFEFPLKERPLHFLDCSVLNSPIC--SPSTTFEVITMYLQHLSD 477
MA HQ P RPL ++ + + C SPSTT EV++ L+ L D
Sbjct: 1 MAFHQRSISLP--SRPLSKVEDELHSIEACISSPSTTIEVVSDGLRRLGD 48
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 512 QMWLMASKWESLEQNNLENAKAFLLKGIQRNPDAEPLYLELFNIEL 649
+MWLMA+++E + Q NL+ A+ L I P + ++ + IEL
Sbjct: 424 KMWLMAAQFE-IRQKNLKAARRILGNAIGMAPKGK-IFKKYIEIEL 467
>05_07_0015 + 27065104-27065428,27065539-27066257
Length = 347
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 199 RKEFEYHIQRRVKQKEDYVNTSLMNL 276
RKEF Y I+ + ++ EDY+ + M++
Sbjct: 217 RKEFVYDIEAKFRELEDYLRRNCMSM 242
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 27.9 bits (59), Expect = 8.7
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 121 NMINELEQMRRTNLYT-DEEIKEISQKRKEFEYHIQRRVKQKEDYVNT 261
N NE QM L EE +I +KRK E + R +K+KE NT
Sbjct: 262 NGTNEENQMAINRLQIIKEEKSKIEEKRKLGEQDVARLMKEKEISENT 309
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +1
Query: 88 KMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKE 246
K E++ + +++ +LE ++ + T E E + K K+F +V +KE
Sbjct: 1458 KEKEELTKEKQSLSKQLEDLKSSQKTTTENSNEQAIKEKDFRIQTLEKVLEKE 1510
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,113,629
Number of Sequences: 37544
Number of extensions: 334437
Number of successful extensions: 904
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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