Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0762
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule los... 32 0.36
U23170-4|AAC46701.1| 463|Caenorhabditis elegans Hypothetical pr... 31 0.84
AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical ... 31 0.84
Z68882-12|CAA93103.2| 204|Caenorhabditis elegans Hypothetical p... 30 1.9
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 28 5.9
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 28 5.9
AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical ... 28 5.9
AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical ... 28 5.9
AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical ... 28 5.9
AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical ... 28 5.9
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 28 5.9
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 28 7.8
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 28 7.8
>U50308-3|AAW88404.1| 1392|Caenorhabditis elegans Gut granule loss
protein 4 protein.
Length = 1392
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 267 YELALLEDITTRRKKIQLTEKKKDLEYAIAQRLNQLFKRFIYKFQNE 407
++ AL+ ++ + RK QLT K+ Y+IA+ +N + F+NE
Sbjct: 453 FQSALIPNLLSTRKNRQLTNKELSQIYSIAKAINLSMSDLLKAFENE 499
>U23170-4|AAC46701.1| 463|Caenorhabditis elegans Hypothetical
protein F58F12.3 protein.
Length = 463
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Frame = +2
Query: 512 QMWLMASKWESLEQNNLENAKAFLLKGIQRNPDAEPLYLELFNIELIDLC--------FK 667
Q+WLMA L+ +A+ +L+ ++ NPD+ LY+ +E + C +
Sbjct: 221 QLWLMA-----LDGMKTVDARESILQALRENPDSASLYVRACKLEHLPSCKMEWLLHALQ 275
Query: 668 AETDEEKEKLQKKADIIWR 724
+T ++K K+ K A+ +R
Sbjct: 276 RDTLDDKMKIIKHAETYFR 294
>AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical
protein ZK250.6 protein.
Length = 843
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 542 SLEQNNLENAKAFLLKGIQ-RNPDAEPLYLELFNIELIDLC 661
+L ++NLEN K LLKGI+ R + +Y + F I+ + LC
Sbjct: 188 ALAEDNLENYKEVLLKGIEYRTSRSSDIYQDGFLIKDLALC 228
>Z68882-12|CAA93103.2| 204|Caenorhabditis elegans Hypothetical
protein C47E12.9 protein.
Length = 204
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 512 QMWLMASKWESLEQNNLENAKAFLLKGIQRN 604
+ W++ +E EQNNLE+++ ++K I +N
Sbjct: 40 KQWIVELTYEFNEQNNLEDSRKTVMKAIDQN 70
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/32 (40%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +1
Query: 88 KMAEQVNQRIENMINELEQMRRTN--LYTDEE 177
++ ++VN++I + ++ELE +R+TN L DEE
Sbjct: 553 QVEKEVNRQIADKLSELETLRKTNEMLTNDEE 584
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +1
Query: 91 MAEQVNQRIENMINELEQMRRTN--LYTDEE 177
+ ++VN++I + ++ELE +R+TN L DEE
Sbjct: 557 LQKEVNRQIADKLSELETLRKTNEMLTNDEE 587
>AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical
protein K08D9.6 protein.
Length = 530
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -2
Query: 148 SFAPTHLSYSQYVDLLVQPFLFISLYYFYYTKTLSYKTVEL 26
SF+P L S+++ L V +S YY+ Y+K+L V L
Sbjct: 66 SFSPPALPVSEHL-LPVSHVFIVSAYYYPYSKSLGKNAVAL 105
>AF016441-3|AAB65909.2| 744|Caenorhabditis elegans Hypothetical
protein M03F8.3 protein.
Length = 744
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 GEVKILIPPFCTKVFLCNKSNIKI*IKMAEQVNQRIENMINELEQMRRTNLYTDEEIKEI 189
G I +P KV NK+ ++ I + + + E + + +T + +E+KE
Sbjct: 10 GNKPIRLPKKAAKVK--NKAPAQLQITAEQLLREAKERELELIPPAPKTKITDPDELKEY 67
Query: 190 S-QKRKEFEYHIQRRVKQKEDYV 255
+KRKEFE I++ Q +++
Sbjct: 68 QRKKRKEFEDGIRKNRMQLANWI 90
>AC025726-9|AAK73924.1| 594|Caenorhabditis elegans Hypothetical
protein Y71G12B.23a protein.
Length = 594
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 147 HLLQLIYHILNTLIYLFSHFYLYLYITFITQKHFRTKRW 31
H+L +IY I TL++ S Y + + F Q R R+
Sbjct: 411 HILMIIYGIFTTLLFTSSTVYHFCELLFRQQNKHRKLRY 449
>AC025726-8|AAT81183.1| 537|Caenorhabditis elegans Hypothetical
protein Y71G12B.23b protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 147 HLLQLIYHILNTLIYLFSHFYLYLYITFITQKHFRTKRW 31
H+L +IY I TL++ S Y + + F Q R R+
Sbjct: 411 HILMIIYGIFTTLLFTSSTVYHFCELLFRQQNKHRKLRY 449
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 97 EQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKED 249
EQ + IEN I E + R EE++++ +++K + ++ ++++E+
Sbjct: 145 EQEKREIENKIKEARKKREQEARRLEEVEKLKEQKKAEKRKMKEALEKEEE 195
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 512 QMWLMASKWESLEQNNLENAKAFLLKGIQRNPDAEPLY 625
++ L S ++L + LEN FLL+ I+ +PD E +Y
Sbjct: 485 KLLLQVSDAKALAKTPLENILPFLLRLIEIHPDDEVIY 522
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -2
Query: 223 VCDIQTLFVFGIFLLSLHLYISLFFSFAPTHLSYSQYVDL--LVQPFLFISLYYFYYTKT 50
+C T+FVFG L + Y ++ + +P + +VD+ ++ P + L+YF K
Sbjct: 48 LCVAMTIFVFGYSFLREYFYFAVLDANSPKYPD-RFHVDMYDIIVPLITSFLFYF-ARKN 105
Query: 49 LSYKTV 32
LS ++V
Sbjct: 106 LSRQSV 111
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/48 (20%), Positives = 23/48 (47%)
Frame = +1
Query: 133 ELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYVNTSLMNL 276
E+E ++R+ Y +I ++ K + HI++ + + V + L
Sbjct: 216 EIEDLKRSEAYAKSQISQLEDTVKSLKLHIEKIASENDQTVVVETLRL 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,972,104
Number of Sequences: 27780
Number of extensions: 345162
Number of successful extensions: 1353
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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