Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0762
(725 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28200.1 68417.m04042 expressed protein 54 1e-07
At2g29670.1 68415.m03606 expressed protein 32 0.34
At1g12150.1 68414.m01407 expressed protein contains Pfam profile... 31 1.0
At5g37120.1 68418.m04455 hypothetical protein hypothetical prote... 30 1.4
At4g08336.1 68417.m01377 hypothetical protein 30 1.8
At2g22560.1 68415.m02674 kinase interacting protein-related simi... 30 1.8
At4g18420.1 68417.m02733 hypothetical protein 29 2.4
At2g41960.1 68415.m05191 expressed protein 29 2.4
At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related... 27 3.0
At2g26770.2 68415.m03211 plectin-related contains weak similarit... 29 3.1
At2g26770.1 68415.m03210 plectin-related contains weak similarit... 29 3.1
At1g75640.1 68414.m08788 leucine-rich repeat family protein / pr... 29 3.1
At3g05110.1 68416.m00555 hypothetical protein 29 4.1
At2g28600.1 68415.m03476 expressed protein 29 4.1
At1g67230.1 68414.m07652 expressed protein 29 4.1
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 29 4.1
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 29 4.1
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca... 29 4.1
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 28 5.5
At3g22190.1 68416.m02800 calmodulin-binding family protein conta... 28 5.5
At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolas... 28 5.5
At4g14840.1 68417.m02281 expressed protein 28 7.2
At2g45730.1 68415.m05688 eukaryotic initiation factor 3 gamma su... 28 7.2
At1g11710.1 68414.m01344 pentatricopeptide (PPR) repeat-containi... 28 7.2
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 28 7.2
At2g03250.1 68415.m00278 EXS family protein / ERD1/XPR1/SYG1 fam... 27 9.6
At1g06180.1 68414.m00650 myb family transcription factor identic... 27 9.6
>At4g28200.1 68417.m04042 expressed protein
Length = 648
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = +1
Query: 91 MAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYV 255
MA+ V R+E M++EL+ + R ++T EI EI ++R++FEY ++R KED++
Sbjct: 1 MADVVQYRLERMVDELDDLERREIFTRAEIAEIVKQRRKFEYRLKRPSPLKEDFI 55
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = +3
Query: 225 KESQTKRRLCQYIAYELALLEDITTRRKKI-QLTEKKKDL---EYAIAQRLNQLFKRFIY 392
+ S K YI YE+ L E RRK + ++T+K+K ++A R+ ++++
Sbjct: 46 RPSPLKEDFIAYIDYEVKLDELRQLRRKSVARVTKKRKKKSVSDFAGVARIVEIYRLATM 105
Query: 393 KFQNEIEIYFEYIKFCK 443
+++ +I ++F Y++FCK
Sbjct: 106 RYKGDINLWFRYLEFCK 122
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +2
Query: 515 MWLMASKWESLEQNNLENAKAFLLKGIQRNPDAEPLYLELFNIEL 649
+W+ A+ WE N+ A+A +L G++ ++E L++E +EL
Sbjct: 146 VWIYAASWEFDRNLNVTAARALMLNGLRVCSNSEDLWVEYLRMEL 190
>At2g29670.1 68415.m03606 expressed protein
Length = 536
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 121 NMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKED--YVNTSLM 270
+M+ E E+M+ +N+ D+ + + + RK F H++ RV+ +ED Y T LM
Sbjct: 376 SMVEEAERMQYSNI--DDSLDQ--ETRKRFVSHVEARVEAEEDTGYFKTELM 423
>At1g12150.1 68414.m01407 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 548
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 94 AEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRK 204
AE+ +R+E +I E+E+ + EE+K ISQK++
Sbjct: 406 AEEAEKRLELVIREVEEAKSAEEKVREEMKMISQKQE 442
>At5g37120.1 68418.m04455 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 98
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +1
Query: 118 ENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVK 237
E +INE+E + + ++E+KE+ +R EFE + +V+
Sbjct: 15 EALINEIETLTARHGEIEKELKELRTERLEFEKMVSEKVE 54
>At4g08336.1 68417.m01377 hypothetical protein
Length = 157
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +1
Query: 118 ENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQK 243
E ++NE+E + ++E+K++ +R EFE + V+ K
Sbjct: 71 EALLNEIETLTAKTRDIEQELKDLRGQRSEFEKMVYENVEMK 112
>At2g22560.1 68415.m02674 kinase interacting protein-related similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]; weak similarity to Myosin II heavy chain,
non muscle (Swiss-Prot:P08799) [Dictyostelium discoideum
Length = 891
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +1
Query: 139 EQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQK-EDYVNTSL 267
+++RRT D EIKE+S+K+KE E ++ ++++ E N+SL
Sbjct: 251 DEVRRT-AELDHEIKEMSRKKKELE-SVKEKIREHFESGANSSL 292
>At4g18420.1 68417.m02733 hypothetical protein
Length = 154
Score = 29.5 bits (63), Expect = 2.4
Identities = 11/40 (27%), Positives = 26/40 (65%)
Frame = +1
Query: 124 MINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQK 243
++NE+E + N ++++KE++ ++ EFE + +V+ K
Sbjct: 73 LLNEIETLAAKNGEFEQKLKELTIEKLEFEKMVSEKVEMK 112
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 94 AEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKE 246
+E + QR+ E+ + + N +EE KE KR+E E ++R+K++E
Sbjct: 477 SELLEQRVHIACKEIVTLEKQNKLLEEEEKE---KREEEERKERKRIKERE 524
>At4g00270.1 68417.m00034 DNA-binding storekeeper protein-related
contains similarity to storekeeper protein [Solanum
tuberosum] gi|14268476|emb|CAC39398; contains PF04504:
Protein of unknown function, DUF573
Length = 302
Score = 26.6 bits (56), Expect(2) = 3.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 120 EYDK*VGANEKNKLIYR*RDKRNIPKTKRV*ISHTKESQTKRRL 251
++ VGA+ N + R RNIP +KR S +E K+++
Sbjct: 8 DFSSCVGADNSNGTLSHRRSPRNIPSSKRA-ASVAEEETMKKKM 50
Score = 21.0 bits (42), Expect(2) = 3.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +3
Query: 297 TRRKKIQLTEKKKDLEYAIAQRL 365
T +KK+++ +KKK L+ + R+
Sbjct: 45 TMKKKMKMKKKKKKLDPPLIVRI 67
>At2g26770.2 68415.m03211 plectin-related contains weak similarity
to Swiss-Prot:Q9JI55 plectin 1 (PLTN, PCN, 300-kDa
intermediate filament-associated protein,
IFAP300)[Cricetulus griseus]
Length = 496
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 85 IKMAEQVNQRIENMINELEQMRRTNLYTDEE--IKEISQKRKEFEYHIQRRVKQKE 246
I+ A QR+E + E EQM R + D E +KE+ + R+ H RV E
Sbjct: 188 IESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRVMDME 243
>At2g26770.1 68415.m03210 plectin-related contains weak similarity
to Swiss-Prot:Q9JI55 plectin 1 (PLTN, PCN, 300-kDa
intermediate filament-associated protein,
IFAP300)[Cricetulus griseus]
Length = 496
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 85 IKMAEQVNQRIENMINELEQMRRTNLYTDEE--IKEISQKRKEFEYHIQRRVKQKE 246
I+ A QR+E + E EQM R + D E +KE+ + R+ H RV E
Sbjct: 188 IESARAAVQRVEEALREHEQMSRASGKQDMEDLMKEVQEARRIKMLHQPSRVMDME 243
>At1g75640.1 68414.m08788 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 1140
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 463 LSQVSSDKCCRYMVITSNVVDGEQMGEFRTEQSRKCKGLSF 585
LS V+ K RY+ ++SN + G+ F + S + LSF
Sbjct: 156 LSDVTVSKSLRYVDLSSNAISGKIPANFSADSSLQLINLSF 196
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 88 KMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQK 243
++ E +++E NEL ++ + D + KE+ +K KE E QR+V+++
Sbjct: 60 ELIETSLKQLEARENELREVEAKRKFFDLKEKELEEKEKELELK-QRQVQER 110
>At2g28600.1 68415.m03476 expressed protein
Length = 502
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 240 KRRLCQYIAYELALLED-ITTRRKKIQLTEKKK 335
KR +CQ + + L LED R+ K +T+KKK
Sbjct: 47 KRSMCQGMCFTLPTLEDPFNERQGKADITKKKK 79
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 88 KMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHI---QRRVKQKEDYVN 258
K AE + + E+ E E++ E+K I+ ++++ E HI + R+K+++ N
Sbjct: 509 KEAEDLKAQRESFEKEWEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAAN 568
Query: 259 TSL 267
++
Sbjct: 569 ENM 571
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 46 KVFLCNKSNIKI*IKMAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKE 207
K F KS + K EQ+++R +++ EL+ RR +EE+ E++++ +E
Sbjct: 252 KEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKELEE 305
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 91 MAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQR 228
+ E++ + E ELEQ++ + D++ +E S KRK I+R
Sbjct: 183 LLEEIEREFEAATKELEQLKVNDFTGDKDDEEHSAKRKSMLEAIER 228
>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 755
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +1
Query: 91 MAEQVNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQR 228
+ E++ + E ELEQ++ + D++ +E S KRK I+R
Sbjct: 183 LLEEIEREFEAATKELEQLKVNDFTGDKDDEEHSAKRKSMLEAIER 228
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +1
Query: 109 QRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKE 246
++++ E+E + T +EE+KE ++R E E + +VK+ +
Sbjct: 316 EKVDTESKEVESVEETTQEKEEEVKEEGKERVEEEEKEKEKVKEDD 361
>At3g22190.1 68416.m02800 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 400
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 448 WGFNRLSQVSSDKCCRYMVITSNVVDGEQMGEFRTEQSRKCKGLSFKGNSKKP 606
WG+N L + + + + SN+ D ++GE EQS K SK P
Sbjct: 239 WGWNWLERWMAVRPWENRFLDSNLRDDAKLGENGMEQSENVPKTQIKSVSKMP 291
>At2g30650.1 68415.m03738 3-hydroxyisobutyryl-coenzyme A hydrolase,
putative / CoA-thioester hydrolase, putative strong
similarity to gi:8572760; contains Pfam profile PF00388
enoyl-CoA hydratase/isomerase family protein
Length = 422
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +1
Query: 322 QRRKRIWSMPLLNV*TNFSSAL---FISSKMKLKYILSI*NSVRVWGFNRLSQVSS 480
+RR+R W + L V ++F L F S+ ++ + ++ +SVR+ FNR Q+++
Sbjct: 17 KRRRRRWHLTLRFVFSSFLQILNGHFFSNLVRSQVLVEEKSSVRILTFNRPKQLNA 72
>At4g14840.1 68417.m02281 expressed protein
Length = 555
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 103 VNQRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKEDYV 255
+ ++ N+ E+++ T DE+I ++ KR E I + K+K D +
Sbjct: 452 LKDKLGNIQTEVDRNSETIRQIDEQIAQLQAKRTELTRCISNKGKEKVDLI 502
>At2g45730.1 68415.m05688 eukaryotic initiation factor 3 gamma
subunit family protein contains Pfam profile PF04189:
Eukaryotic initiation factor 3, gamma subunit
Length = 446
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +1
Query: 106 NQRIENMINE-LEQMRRTNLYTDEEIKEISQKRKEFEYHIQ-----RRVKQKEDYVNTSL 267
N +N+ E +E MRR DE I+ + K F+ Q ++K+++ Y L
Sbjct: 111 NNEAQNLTGEEIEAMRREGAKGDEIIEALIANSKTFDKKFQLSQEKYKLKKQKKYAPKLL 170
Query: 268 MNLPYLR-I*QRVEKKY 315
+ P+ R I + KKY
Sbjct: 171 LRRPFARSICEAYFKKY 187
>At1g11710.1 68414.m01344 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 657
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 539 ESLEQNNLENAKAFLLKGIQRNPDAEPLYLELFNIELIDLCFKAETDEEKEKLQ 700
ESL+ N+E A L K +Q+ + + L FNI + LC ++ KE L+
Sbjct: 541 ESLKTGNVEEADDILSK-MQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +3
Query: 183 RNIPKTKRV*ISHTKE--SQTKRRLCQYIAYELALLEDITTRRKKIQLTEKKKDLEYAIA 356
+NIPK KR + + + K R I + LL+ T ++KK T++KK EY
Sbjct: 1055 KNIPKRKRPSLEDKRAVIMEPKERKEHTIIQQFQLLQHHTMKKKK--ATDQKKRKEYEAE 1112
Query: 357 QRLNQ 371
+ N+
Sbjct: 1113 KAKNE 1117
>At2g03250.1 68415.m00278 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 756
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 109 QRIENMINELEQMRRTNLYTDEEIKEISQKRKEFEYHIQRRVKQKED 249
+R+++ N++E+ R + DE +KE + K+ + I R+K KE+
Sbjct: 90 RRLDDEFNKVEKFYREKV--DEVVKEAAVLNKQMDALIAFRLKMKEE 134
>At1g06180.1 68414.m00650 myb family transcription factor identical
to GB:CAA90748 GI:1263093 from [Arabidopsis
thaliana];contains PFAM profile:PF00249
Length = 246
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 166 TDEEIKEISQKRKEFEYHIQRRVKQKEDYVNTSLMNLP 279
TD EIK + + H + KED+V+T+ +P
Sbjct: 100 TDNEIKNVWHTHLKKRLHHSQDQNNKEDFVSTTAAEMP 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,748,952
Number of Sequences: 28952
Number of extensions: 304336
Number of successful extensions: 1049
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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