Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0761
(617 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0504 + 18180321-18181013 31 0.55
03_01_0239 + 1859446-1860112,1861218-1861338,1861431-1861618,186... 31 0.55
07_03_1223 + 24985730-24985916,24986008-24986039,24986790-249868... 30 1.3
02_03_0246 - 16807619-16808145,16808208-16808868 30 1.3
09_04_0296 + 16461482-16461544,16462087-16463097 29 2.2
02_05_0481 + 29361542-29361669,29362091-29362341,29362820-293630... 29 3.0
11_06_0247 - 21669299-21669348,21669673-21670012,21670110-216701... 29 3.9
04_04_0370 - 24751242-24751350,24751818-24751879,24752028-247521... 29 3.9
06_03_0171 + 17498874-17499205,17499344-17499392 28 5.2
09_04_0668 + 19325747-19325785,19325825-19325881,19326361-193264... 28 6.8
01_06_1440 + 37378121-37378958,37379344-37379494,37379567-373799... 28 6.8
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 28 6.8
12_01_0235 + 1765117-1766770,1766881-1766984 27 9.0
11_01_0540 + 4269373-4269563,4269636-4269717,4269736-4269889,426... 27 9.0
08_02_0650 - 19708479-19710507,19711033-19711889 27 9.0
07_01_0254 - 1893079-1893181,1893455-1893492,1893586-1893706,189... 27 9.0
05_05_0062 + 22039410-22039985,22041467-22041555,22041638-220417... 27 9.0
>09_04_0504 + 18180321-18181013
Length = 230
Score = 31.5 bits (68), Expect = 0.55
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = -1
Query: 554 TKPCKTVARSKSSQRLGTTPSRP-PAHLGPRP-TAPIT*IPKLTLPDSTIQHAPHVGPLL 381
+ P K+ RSK+S+R +P P P P P TA + T P++T + AP L
Sbjct: 113 SSPAKSPKRSKNSKRRRVSPPPPQPVPAPPPPTTADAADVAAPTAPEATTKKAPED---L 169
Query: 380 GVA*ASPPAGAFRVLLLRIGRGSLE 306
A A+ PA A + + G G E
Sbjct: 170 TAAAATQPAVALGLGVADGGGGGKE 194
>03_01_0239 +
1859446-1860112,1861218-1861338,1861431-1861618,
1861710-1861804
Length = 356
Score = 31.5 bits (68), Expect = 0.55
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 599 IRCSCSKT---FSCTLVLTKPCKTVARSKSSQRLGTT 498
IRCSCS T +CT V K C +V + +LG T
Sbjct: 253 IRCSCSSTTYQLNCTAVQNKGCPSVPLCNGTLKLGET 289
>07_03_1223 +
24985730-24985916,24986008-24986039,24986790-24986879,
24987441-24987535,24987635-24987839,24988011-24988080,
24988564-24988642,24988859-24988926,24989114-24989202,
24989284-24989354,24989493-24989578,24989674-24989750
Length = 382
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 78 IFMMLQL-INGLKCLQ-ARGVEEISETLSSFVALREAQANNNVPDDRLTSLSAPKTNCYG 251
IF+++QL I G + L+ +RGV ++E + +R + + L LS T+CY
Sbjct: 259 IFLLIQLCILGAERLRRSRGVPVLNEDGNIISDIRHGKTADLATSSELLRLSVSSTSCYA 318
Query: 252 RCVFCKD*ATRRTAKLTN 305
+ K AT+ N
Sbjct: 319 TEFYLKKKATKHPVVRAN 336
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/53 (28%), Positives = 20/53 (37%)
Frame = -1
Query: 593 CSCSKTFSCTLVLTKPCKTVARSKSSQRLGTTPSRPPAHLGPRPTAPIT*IPK 435
C C + PC T + + R +TP P A P P T IP+
Sbjct: 118 CCCGRRRRAASPSASPCTTPPATARAPRTSSTPGPPSAQAPPPPVIDRTSIPE 170
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -1
Query: 554 TKPCKTVARSKSSQRLGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPHVGPLLGV 375
++PC AR + GT P PP+ GP P A + K S + P + +
Sbjct: 195 SRPCFPGARLRPR---GTVPPPPPSSSGPSP-ATFACVVKALFSSSRLPRKPKAPTAVPL 250
Query: 374 A*ASPP 357
ASPP
Sbjct: 251 PPASPP 256
>02_05_0481 + 29361542-29361669,29362091-29362341,29362820-29363002,
29363099-29363206,29363583-29363697,29363781-29364819,
29364904-29365014,29365268-29365326,29366601-29366763,
29367162-29367435,29367530-29367680,29367766-29367877,
29367978-29368143,29368261-29368331,29368474-29368565,
29368721-29368883,29369134-29369205,29369236-29369263,
29369519-29369910,29369991-29370106,29370201-29370498,
29370820-29371139,29371332-29371590,29371985-29372302,
29372423-29372527,29372648-29372776,29374001-29374381,
29374467-29374604,29374949-29375185,29375264-29375569
Length = 2094
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 409 CIVESGKVSFGIHVMGAVGRGPRCAGGRE 495
C+ ES KVSF I VM GP C G E
Sbjct: 1391 CLCESKKVSFSIAVMVQPVSGPVCLFGTE 1419
>11_06_0247 -
21669299-21669348,21669673-21670012,21670110-21670199,
21670280-21670339,21670564-21670856,21671176-21671245,
21671623-21671970,21673188-21673318,21673418-21673901,
21674839-21675558
Length = 861
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 488 PPAHLGPRPTAPIT*IPKLTLPDSTIQHAPHVGPLLGVA*ASPPAGAFRVLLLRI 324
PP GPR + +LTLP++ ++ H G L AG R ++ RI
Sbjct: 156 PPPEAGPRAARSKAWMAELTLPEAELRRLRHAGMRLKSRIKVGGAGVTREIVERI 210
>04_04_0370 -
24751242-24751350,24751818-24751879,24752028-24752110,
24752359-24752473,24753703-24753768,24753875-24753974,
24754477-24754682
Length = 246
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -1
Query: 515 QRLGTTPSRPPAHLGPRPTAPIT*IPKLTLPDSTIQHAPHVGP 387
+++ + +PP H+ RP P +P L + D I GP
Sbjct: 125 EKVSDSSLKPPVHIAGRPNVPPYPLPALPIDDDEISSKAIGGP 167
>06_03_0171 + 17498874-17499205,17499344-17499392
Length = 126
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/63 (34%), Positives = 28/63 (44%)
Frame = +1
Query: 355 AGGEAQATPKRGPT*GACCIVESGKVSFGIHVMGAVGRGPRCAGGREGVVPKRWLDXERA 534
AGGEA R P+ GA SG G G GP AGG G +RW++ A
Sbjct: 7 AGGEAAVV--RRPSDGALPSARSGGRK------GGGGAGPAAAGGAAGDGWRRWVEAAAA 58
Query: 535 TVL 543
+ +
Sbjct: 59 SAV 61
>09_04_0668 +
19325747-19325785,19325825-19325881,19326361-19326490,
19328303-19328352,19328645-19328741,19328834-19328902,
19328986-19329078,19329194-19329317,19329904-19329973,
19330046-19330087,19330245-19330373,19330468-19330575,
19330729-19330771,19330840-19330878,19331076-19331200,
19331397-19331409,19331504-19331574,19331849-19331936,
19332515-19332600,19332708-19332762,19332859-19333028,
19333157-19333273,19333392-19333453,19333734-19333793,
19333855-19333921
Length = 667
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +1
Query: 301 RTSKLPLPMRNKSTRNAPAGGEAQATPKRGPT----*GACCIVESGKVSFGIHVMGAVGR 468
RT +LP P +N S ++ P R PT + C +ESG + + A
Sbjct: 531 RTRELPEPQQNVSMQSGQEASTVDKDPSRTPTSVREQASVCSLESGVLGQKVRKSLAGAG 590
Query: 469 GPRCA 483
G +C+
Sbjct: 591 GTQCS 595
>01_06_1440 +
37378121-37378958,37379344-37379494,37379567-37379936,
37380021-37380431,37380522-37380820,37380897-37381155,
37381248-37381497,37381744-37381875,37381936-37382208,
37383023-37383267
Length = 1075
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 497 PSRPPAHLGPRPTAPIT*IPKL 432
P P GPRPTAPI+ P+L
Sbjct: 842 PRAPTVGAGPRPTAPISHGPRL 863
>01_05_0343 + 21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 27.9 bits (59), Expect = 6.8
Identities = 27/105 (25%), Positives = 41/105 (39%)
Frame = -3
Query: 615 GPNEEHQVQLLEDVQLYPRSDQTV*DRGSLXVQPALRDNSLSSTGTPWTTSNGPHNMNSK 436
GP+EE + +LE Q + + D G L V+ AL S+ +
Sbjct: 888 GPSEEDVLTILEIEQRAHENGLQIQDEGRLKVREALTPQSMQ------MALQRVVPFPCR 941
Query: 435 TDFA*FNDTARSSCRTSFRSGLSFSPGRSVSSALIAHRQREFRGS 301
F +SSC SF++ L++SPG A + GS
Sbjct: 942 KQFTVVILMPKSSCWNSFKALLTWSPGGFSRDAKVVALNESVAGS 986
>12_01_0235 + 1765117-1766770,1766881-1766984
Length = 585
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 139 SSTPRA*RHLRPLISCSIMKIASCTCSVGTSWELVERASTERR 11
++TP HLR ++ +++ A+ G E VER T RR
Sbjct: 445 ATTPEEGSHLRAVLERDVLRRAAVGVIAGEGAERVERPETYRR 487
>11_01_0540 +
4269373-4269563,4269636-4269717,4269736-4269889,
4269948-4269972,4270838-4270976,4271076-4271261,
4271379-4271442,4271544-4271659
Length = 318
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 306 GSSVLQFASLLSPCKIHISRNSWSSEPRVTSIYRP 202
G+ VL ASL S C I IS S +EP + + Y P
Sbjct: 122 GNLVLLHASLGSLCPIAISTPSSYNEPMLMNYYSP 156
>08_02_0650 - 19708479-19710507,19711033-19711889
Length = 961
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -3
Query: 270 PCKIHISRNSWSSEPRVTSIYRPER-CY*PGLPS 172
PC + I SWS PR ++ + CY LP+
Sbjct: 751 PCSLDILAESWSPPPRHLQTFQTDMGCYFSSLPT 784
>07_01_0254 -
1893079-1893181,1893455-1893492,1893586-1893706,
1893800-1893869,1894231-1894401,1894485-1894659,
1894746-1894933,1895023-1895166,1895316-1895379,
1895464-1895556,1895649-1895734,1896434-1896574,
1896658-1896804,1896970-1897057,1898080-1898235,
1898428-1898577
Length = 644
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +2
Query: 326 CAIRALETLLPGEKLRPLLK 385
CA R ET PGEK +PL K
Sbjct: 467 CANRVAETAKPGEKQKPLQK 486
>05_05_0062 +
22039410-22039985,22041467-22041555,22041638-22041770,
22041864-22042093,22042199-22042675,22042748-22042934,
22043536-22043574,22043624-22044052
Length = 719
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 173 QRHERGQSLRDFLDPSRLKALEAVDQL 93
Q H R + R ++P RLK +E +D+L
Sbjct: 486 QGHRRFEGFRKTINPDRLKFVELIDKL 512
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,818,036
Number of Sequences: 37544
Number of extensions: 400964
Number of successful extensions: 1477
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1490248872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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