Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0761
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.59 
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          24   1.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   1.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.3  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
 Frame = -1

Query: 608 TRNIRCSCSKTFS--CTLVLTKPCKTVARSKSSQRLGTTPSRPPAHL 474
           T+N +CS  +     C     K C  V  S+ + R G  P R  A +
Sbjct: 105 TKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAVRFGRVPKREKARI 151


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = +2

Query: 278 NEANCKTDEPLNSLCRCAIRALETLLPGEKLRPLLKEVLHEERAVSLNQAKSVLEFMLWG 457
           NEA+ K  + + S C    + L  LL      P +  ++ ++  V  N  K ++EF+  G
Sbjct: 43  NEASLKAHKVVLSACSSYFQKL--LLSNPCKHPTI--IMPQD--VCFNDLKFIIEFVYRG 96

Query: 458 PLDVVQ 475
            +DV Q
Sbjct: 97  EIDVSQ 102


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +3

Query: 24  EALSTNSQLVPTEQVHEAIFMMLQLINGLKCLQARGV 134
           E L    Q+V   +    +F+    +NGL+ L  RG+
Sbjct: 372 EGLEMKGQMVHCPESDSILFVSSPFLNGLEGLTGRGL 408


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 21/67 (31%), Positives = 26/67 (38%)
 Frame = -3

Query: 420 FNDTARSSCRTSFRSGLSFSPGRSVSSALIAHRQREFRGSSVLQFASLLSPCKIHISRNS 241
           F D AR S   S          RS S   +  R  E        F+SLLS  + H  ++ 
Sbjct: 680 FQDVARRSVANSPTKNADSREYRSNSMGAVMTRNSEM-------FSSLLSDTEQHFRQHR 732

Query: 240 WSSEPRV 220
            S  PRV
Sbjct: 733 DSLSPRV 739


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 5    PKSSLRRSSFDQLPTRAN*TGARSYLHDAATDQRPQVPSGARGR 136
            P+S   ++  DQL   +  T       D++ D+  + PS + GR
Sbjct: 1320 PESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSASGGR 1363


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 108 LKCLQARGVEEISETLSSFV 167
           ++CL+ R    I ETL++F+
Sbjct: 270 IRCLRYRPARAIVETLANFM 289


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 108 LKCLQARGVEEISETLSSFV 167
           ++CL+ R    I ETL++F+
Sbjct: 141 IRCLRYRPARAIVETLANFM 160


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 108 LKCLQARGVEEISETLSSFV 167
           ++CL+ R    I ETL++F+
Sbjct: 270 IRCLRYRPARAIVETLANFM 289


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 587 CSKTFSCTLVLTKPCKTVARSKSSQRL 507
           C   F C  ++T  CKT    ++ Q L
Sbjct: 284 CWVPFFCVNIVTSYCKTCISGRAFQVL 310


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 553 VRTRVQLNVFEQLHLM 600
           ++ ++QLNV +Q HL+
Sbjct: 149 LQEQLQLNVIQQTHLL 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,854
Number of Sequences: 438
Number of extensions: 3536
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)