Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0756
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1312 + 32565447-32565585,32566008-32566060,32566139-325667...    27   8.8  
04_04_1311 - 32559549-32559674,32559761-32560078,32560158-325602...    27   8.8  

>04_04_1312 + 32565447-32565585,32566008-32566060,32566139-32566771,
            32566844-32566972,32567052-32567144,32567220-32567336,
            32567412-32567512,32567603-32567870,32568236-32568265,
            32568361-32568572,32568650-32568731,32568804-32569555,
            32569640-32569811,32570412-32570498,32570578-32570895,
            32570982-32571107
          Length = 1103

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 270  YHQIFFVTRCYSFT---VEVNREHLLSTYFIRNIGT 368
            Y+Q+ F  R  ++T   ++VN     S YFI N GT
Sbjct: 1012 YNQVKFPDRKVAYTGTNIKVNDSAFASMYFIENFGT 1047


>04_04_1311 - 32559549-32559674,32559761-32560078,32560158-32560244,
            32560845-32561016,32561101-32561852,32561925-32562006,
            32562084-32562295,32562391-32562420,32562786-32563074,
            32563143-32563243,32563319-32563435,32563511-32563603,
            32563683-32563811,32563884-32564516,32564765-32564844,
            32565152-32565164
          Length = 1077

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
 Frame = +3

Query: 270  YHQIFFVTRCYSFT---VEVNREHLLSTYFIRNIGT 368
            Y+Q+ F  R  ++T   ++VN     S YFI N GT
Sbjct: 986  YNQVKFPDRKVAYTGTNIKVNDSAFASMYFIENFGT 1021


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,403,028
Number of Sequences: 37544
Number of extensions: 287202
Number of successful extensions: 541
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)