Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0756
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    25   2.0  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    25   2.0  
AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical prote...    25   2.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   4.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   4.6  
Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    23   6.1  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   6.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.0  

>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 321 NREHLLSTYFIRNIGTHLRDL--KTGASLHTNAPDVLSFRPRRLRVYPTE 464
           +REHL  + F+R  G+H +    K   + +T  P    + P     +PT+
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLCHARNTTQPRTRWYIPAFFAAHPTD 73


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 321 NREHLLSTYFIRNIGTHLRDL--KTGASLHTNAPDVLSFRPRRLRVYPTE 464
           +REHL  + F+R  G+H +    K   + +T  P    + P     +PT+
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLCHAKNTTRPRTRWYIPAFFAAHPTD 73


>AJ439061-1|CAD27770.1|   89|Anopheles gambiae hypothetical protein
           protein.
          Length = 89

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = +3

Query: 321 NREHLLSTYFIRNIGTHLRDL--KTGASLHTNAPDVLSFRPRRLRVYPTE 464
           +REHL  + F+R  G+H +    K   + +T  P    + P     +PT+
Sbjct: 24  HREHLHESGFVRRQGSHAKSSVHKLCHAKNTTRPRTRWYIPAFFAAHPTD 73


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 298  HRVTKKIWW*ASCEP 254
            HR+  K+WW  + +P
Sbjct: 1162 HRIQYKVWWFVTSQP 1176


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 93   YIVKFPVAIQLAKHQTNKTAELVPNCFDFQY 1
            +I+ F  A QL    T K AEL P+C  + Y
Sbjct: 1749 FILNFDNATQLL---TGKVAELNPSCEGYPY 1776


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 59  RNIKRIKPPSWYRTASTS 6
           R IKR K  +WYR  + S
Sbjct: 323 REIKRTKKATWYRLVNMS 340


>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 417 DVLSFRPRRLRVYPTEYSAR 476
           + L  RP  +R YP+ YS +
Sbjct: 160 EYLDARPEHVRKYPSSYSGK 179


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = -1

Query: 288 QKKSGGKLLVSPHGWINTPTA*FYREAEGSQQLXLRLYVSRLVPDFTTNKNKNHS 124
           Q++S G  +VSP   I  P+A        S Q    +++    P F T+    HS
Sbjct: 93  QQQSSGGAVVSPATQIVPPSAASESPGSVSSQPSGPIHIPAKRPAFDTDTRLRHS 147


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 13/58 (22%), Positives = 30/58 (51%)
 Frame = -1

Query: 201 SQQLXLRLYVSRLVPDFTTNKNKNHSINVVETING*YIVKFPVAIQLAKHQTNKTAEL 28
           +++L +   +SRLV   +  K  N S N+V  +   Y  K   ++++  ++T+   ++
Sbjct: 368 AEELSVYEQLSRLVEGSSAAKLSNDSSNIVSLVRDQY-NKISSSVEMKDNRTDNVIDV 424


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 229 SRGIYPPVWAHKKL 270
           SRG +PP W  ++L
Sbjct: 536 SRGTFPPQWKRQRL 549


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,898
Number of Sequences: 2352
Number of extensions: 11495
Number of successful extensions: 66
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)