BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0756
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein pr... 30 5.5
BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open readi... 30 5.5
AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open readi... 30 5.5
AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens ... 30 5.5
AF005070-1|AAB61615.1| 348|Homo sapiens neural cell adhesion mo... 30 5.5
BC117129-1|AAI17130.1| 1030|Homo sapiens MMS19 nucleotide excisi... 29 7.2
BC080532-1|AAH80532.1| 871|Homo sapiens MMS19 protein protein. 29 7.2
BC009396-1|AAH09396.2| 460|Homo sapiens MMS19L protein protein. 29 7.2
BC007298-1|AAH07298.1| 293|Homo sapiens MMS19L protein protein. 29 7.2
BC006575-1|AAH06575.2| 803|Homo sapiens MMS19L protein protein. 29 7.2
BC002692-1|AAH02692.1| 692|Homo sapiens Unknown (protein for IM... 29 7.2
AY974244-1|AAX59033.1| 1030|Homo sapiens MMS19-like (MET18 homol... 29 7.2
AL359388-1|CAI14189.1| 1030|Homo sapiens MMS19-like (MET18 homol... 29 7.2
AL355490-23|CAI40792.1| 885|Homo sapiens MMS19-like (MET18 homo... 29 7.2
AL355490-1|CAI40770.1| 1030|Homo sapiens MMS19-like (MET18 homol... 29 7.2
AK027710-1|BAB55315.1| 774|Homo sapiens protein ( Homo sapiens ... 29 7.2
AJ306408-1|CAC29239.1| 1030|Homo sapiens MMS19 protein protein. 29 7.2
AF357881-1|AAK70402.1| 1030|Homo sapiens transcriptional coactiv... 29 7.2
AF319947-1|AAK52668.1| 1030|Homo sapiens MMS19 protein. 29 7.2
DQ007053-1|AAY16982.1| 501|Homo sapiens beta-site APP-cleaving ... 29 9.5
BC065492-1|AAH65492.1| 501|Homo sapiens beta-site APP-cleaving ... 29 9.5
AF338817-1|AAK38375.1| 457|Homo sapiens beta-site APP cleaving ... 29 9.5
AF338816-1|AAK38374.1| 476|Homo sapiens beta-site APP cleaving ... 29 9.5
AF204943-1|AAF26367.1| 501|Homo sapiens transmembrane aspartic ... 29 9.5
AF201468-1|AAF18982.1| 501|Homo sapiens APP beta-secretase prot... 29 9.5
AF200343-1|AAF17079.1| 501|Homo sapiens aspartyl protease 2 pro... 29 9.5
AF200193-1|AAF13715.1| 488|Homo sapiens memapsin 2 protein. 29 9.5
AF190725-1|AAF04142.1| 501|Homo sapiens beta-site APP cleaving ... 29 9.5
AB050438-1|BAB40933.1| 432|Homo sapiens beta-site APP cleaving ... 29 9.5
AB050437-1|BAB40932.1| 457|Homo sapiens beta-site APP cleaving ... 29 9.5
AB050436-1|BAB40931.1| 476|Homo sapiens beta-site APP cleaving ... 29 9.5
AB032975-1|BAA86463.2| 532|Homo sapiens KIAA1149 protein protein. 29 9.5
>BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 240 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 362
L+ + + +Y I V Y F VEV +E +LSTY + ++
Sbjct: 253 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 293
>BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 240 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 362
L+ + + +Y I V Y F VEV +E +LSTY + ++
Sbjct: 351 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 391
>AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 240 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 362
L+ + + +Y I V Y F VEV +E +LSTY + ++
Sbjct: 351 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 391
>AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ25795 fis, clone TST07031. ).
Length = 277
Score = 29.9 bits (64), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 240 LSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNI 362
L+ + + +Y I V Y F VEV +E +LSTY + ++
Sbjct: 219 LANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDL 259
>AF005070-1|AAB61615.1| 348|Homo sapiens neural cell adhesion
molecule protein.
Length = 348
Score = 29.9 bits (64), Expect = 5.5
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 251 CGLTRSLPPDFFCYTMLFLHRGSQS*TS--VKYVFH*KYWYPSAGFKNRCITTYECTGRL 424
C + SLPP T+++ H+G V+++F + P G K TY C GR+
Sbjct: 139 CDVVSSLPP-----TIIWKHKGRDVILKKDVRFIFLSNNYLPIPGIKKTDEGTYRCEGRI 193
Query: 425 I 427
+
Sbjct: 194 L 194
>BC117129-1|AAI17130.1| 1030|Homo sapiens MMS19 nucleotide excision
repair homolog (S. cerevisiae) protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>BC080532-1|AAH80532.1| 871|Homo sapiens MMS19 protein protein.
Length = 871
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 651 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 690
>BC009396-1|AAH09396.2| 460|Homo sapiens MMS19L protein protein.
Length = 460
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 240 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 279
>BC007298-1|AAH07298.1| 293|Homo sapiens MMS19L protein protein.
Length = 293
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 73 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 112
>BC006575-1|AAH06575.2| 803|Homo sapiens MMS19L protein protein.
Length = 803
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 583 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 622
>BC002692-1|AAH02692.1| 692|Homo sapiens Unknown (protein for
IMAGE:3605877) protein.
Length = 692
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 472 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 511
>AY974244-1|AAX59033.1| 1030|Homo sapiens MMS19-like (MET18 homolog,
S. cerevisiae) protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>AL359388-1|CAI14189.1| 1030|Homo sapiens MMS19-like (MET18 homolog,
S. cerevisiae) protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>AL355490-23|CAI40792.1| 885|Homo sapiens MMS19-like (MET18
homolog, S. cerevisiae) protein.
Length = 885
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 665 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 704
>AL355490-1|CAI40770.1| 1030|Homo sapiens MMS19-like (MET18 homolog,
S. cerevisiae) protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>AK027710-1|BAB55315.1| 774|Homo sapiens protein ( Homo sapiens
cDNA FLJ14804 fis, clone NT2RP4001638, weakly similar to
DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19. ).
Length = 774
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 554 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 593
>AJ306408-1|CAC29239.1| 1030|Homo sapiens MMS19 protein protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>AF357881-1|AAK70402.1| 1030|Homo sapiens transcriptional
coactivator MMS19 protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>AF319947-1|AAK52668.1| 1030|Homo sapiens MMS19 protein.
Length = 1030
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 509 VLEYHPAKKCLTRRVLGRVYTKSSWPKG*DVRCIRM**CT 390
VL YHP CLT R++G + P D + M CT
Sbjct: 810 VLRYHPLSSCLTARLMGLLSDPELGPAAADGFSLLMSDCT 849
>DQ007053-1|AAY16982.1| 501|Homo sapiens beta-site APP-cleaving
enzyme 1 protein.
Length = 501
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>BC065492-1|AAH65492.1| 501|Homo sapiens beta-site APP-cleaving
enzyme 1 protein.
Length = 501
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AF338817-1|AAK38375.1| 457|Homo sapiens beta-site APP cleaving
enzyme type C protein.
Length = 457
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AF338816-1|AAK38374.1| 476|Homo sapiens beta-site APP cleaving
enzyme type B protein.
Length = 476
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AF204943-1|AAF26367.1| 501|Homo sapiens transmembrane aspartic
proteinase Asp 2 protein.
Length = 501
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AF201468-1|AAF18982.1| 501|Homo sapiens APP beta-secretase
protein.
Length = 501
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AF200343-1|AAF17079.1| 501|Homo sapiens aspartyl protease 2
protein.
Length = 501
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AF200193-1|AAF13715.1| 488|Homo sapiens memapsin 2 protein.
Length = 488
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 54 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 113
Query: 390 G 392
G
Sbjct: 114 G 114
>AF190725-1|AAF04142.1| 501|Homo sapiens beta-site APP cleaving
enzyme protein.
Length = 501
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AB050438-1|BAB40933.1| 432|Homo sapiens beta-site APP cleaving
enzyme I-432 protein.
Length = 432
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AB050437-1|BAB40932.1| 457|Homo sapiens beta-site APP cleaving
enzyme I-457 protein.
Length = 457
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AB050436-1|BAB40931.1| 476|Homo sapiens beta-site APP cleaving
enzyme I-476 protein.
Length = 476
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 67 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 126
Query: 390 G 392
G
Sbjct: 127 G 127
>AB032975-1|BAA86463.2| 532|Homo sapiens KIAA1149 protein protein.
Length = 532
Score = 29.1 bits (62), Expect = 9.5
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 210 LRGRIRQ*GYLSTRVGSQEAYHQIFFVTRCYSFTVEVNREHLLSTYFIRNIGTHLRDLKT 389
LRG+ Q Y+ VGS I T +F V L Y+ R + + RDL+
Sbjct: 98 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRK 157
Query: 390 G 392
G
Sbjct: 158 G 158
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,318,936
Number of Sequences: 237096
Number of extensions: 1544717
Number of successful extensions: 2526
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2526
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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