Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0755
(582 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 63 3e-11
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 60 3e-10
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 58 1e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 2e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 52 5e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 52 6e-08
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 47 2e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 45 9e-06
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 44 2e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 39 6e-04
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 36 0.006
SPCC645.11c |mug117||meiotically upregulated gene Mug117|Schizos... 33 0.040
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.12
SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|c... 28 0.87
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 26 4.6
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 25 6.1
SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit Alp4|... 25 6.1
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 25 8.1
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 25 8.1
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 25 8.1
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 62.9 bits (146), Expect = 3e-11
Identities = 31/72 (43%), Positives = 40/72 (55%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGK 184
C KR R+ +E HI+ +H + P +C C A FV K+H+RIH RPYVCE C K
Sbjct: 450 CNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLK 507
Query: 185 TFTTRDNRNTHR 220
F D N H+
Sbjct: 508 RFNRLDALNRHK 519
Score = 40.3 bits (90), Expect = 2e-04
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 92 CGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
C + + H++ H +RPY C++C F + H H + +PY C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC 503
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 59.7 bits (138), Expect = 3e-10
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKC--ITCGASFVYPEHYKKHVRIHTGERPYVCEI- 175
C K++ R LLE H++ +H+ E P C C +F H K H R HT +P+ C
Sbjct: 30 CGKKYSRPSLLEQHLR-THSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYD 88
Query: 176 -CGKTFTTRDNRNTHRFTHSDKKPYEC 253
C F T+ + H H KPY C
Sbjct: 89 GCDAQFYTQQHLERHIEVHRKPKPYAC 115
Score = 52.8 bits (121), Expect = 4e-08
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCIT--CGASFVYPEHYKKHVRIHTGERPYVC--E 172
C K F R+ L+ H K HT P C C A F +H ++H+ +H +PY C E
Sbjct: 60 CSKAFYRKSHLKIH-KRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWE 118
Query: 173 ICGKTFTTRDNRNTH-RFTHSDKKPYEC 253
C + F+ +H H+ PY C
Sbjct: 119 GCDECFSKHQQLRSHISACHTHLLPYPC 146
Score = 41.1 bits (92), Expect = 1e-04
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHT---GERPYVCEI 175
C K F R L+ HI H G C +CG F Y ++H+ T +PY+ E
Sbjct: 243 CKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINE- 301
Query: 176 CG 181
CG
Sbjct: 302 CG 303
Score = 32.7 bits (71), Expect = 0.040
Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGA-----SFVYPEHYKKHVR-IHTGERPYV 166
C ++FK L +H+ T K C SF KKH+ IH G +
Sbjct: 209 CGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFH 268
Query: 167 CEICGKTFTTRDNRNTHRFTHSDKKPYE 250
C+ CG F + H + KK ++
Sbjct: 269 CDSCGTKFGYKHMLQRHLERGTCKKAHK 296
Score = 30.3 bits (65), Expect = 0.21
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERP-YV--CEI 175
C RF ++ L+ H+ +H C S V E ++K ++ R +V C I
Sbjct: 151 CELRFATKQKLQNHVNRAHEKIISYSCPH--ESCVGHEGFEKWSQLQNHIREAHVPSCSI 208
Query: 176 CGKTFTT----RDNRNTHRFTHSDKKPYEC 253
CG+ F T R + H+ T ++K Y C
Sbjct: 209 CGRQFKTAAHLRHHVVLHQTTLEERKTYHC 238
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 158 PYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
PY E CGK ++ H THS+++P+ C
Sbjct: 26 PY--EECGKKYSRPSLLEQHLRTHSNERPFVC 55
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 57.6 bits (133), Expect = 1e-09
Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +2
Query: 11 KRFKRRRLLEYHIKASHT-GESPLKCITCGASFVYPEHYKKHVR-IHTGERPYVCEICGK 184
KR KRR+ + G C C F EH ++H+R +HT E+P+VC ICGK
Sbjct: 400 KRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGK 458
Query: 185 TFTTRDNRNTHRFTHSDKKP 244
F+ RDN H H + P
Sbjct: 459 RFSRRDNLRQHERLHVNASP 478
Score = 48.8 bits (111), Expect = 6e-07
Identities = 21/52 (40%), Positives = 29/52 (55%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERP 160
C K+FKR L HI++ HT E P CI CG F ++ ++H R+H P
Sbjct: 428 CSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASP 478
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/71 (33%), Positives = 35/71 (49%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGK 184
C KRF R L+ H+ +HT P +C C SF ++H ++HTG + + C C +
Sbjct: 577 CNKRFTRAYNLKSHMN-THTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQ 635
Query: 185 TFTTRDNRNTH 217
F D N H
Sbjct: 636 RFARMDALNRH 646
Score = 45.2 bits (102), Expect = 7e-06
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 92 CGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
C F + K H+ HT RP+ C IC K+F + ++ H H+ K + C
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFAC 630
Score = 30.7 bits (66), Expect = 0.16
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGE 154
C K F R+ H + HTG C+TC F + +H + G+
Sbjct: 605 CKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQ 653
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 52.4 bits (120), Expect = 5e-08
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Frame = +2
Query: 26 RRLLEYHIKASHTGESP---LKCITCGASFVYPEHYKKHVRIHTGERPYVCEI--CGKTF 190
R++ + H +S T + +C C F P K H HTGERP+VC+ CGK F
Sbjct: 448 RKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAF 507
Query: 191 TTRDNRNTHRFTH 229
R N H+ H
Sbjct: 508 NVRSNMRRHQRIH 520
Score = 25.8 bits (54), Expect = 4.6
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
Y C C + F+ + H ++H+ ++P+ C
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVC 498
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 52.0 bits (119), Expect = 6e-08
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +2
Query: 74 PLKCITCGASFVYPEHYKKHVRIHTGERPYVCEI--CGKTFTTRDNRNTHRFTHSD 235
P KC C +F EH +H+R HTGE+P+VC C K F+ D H H++
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
Score = 36.3 bits (80), Expect = 0.003
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 155 RPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
RPY C +C K F +++ H TH+ +KP+ C
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVC 56
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 46.8 bits (106), Expect = 2e-06
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKHVRIHTGERPYVCEI--CGKTFTTRDNRNTHRFTHSDK 238
+C C F EH +H+R HTGE+P+ C C K FT RD H TH K
Sbjct: 5 ECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
Score = 33.9 bits (74), Expect = 0.017
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCI--TCGASFVYPEHYKKHVRIH 145
C + F R+ HI+ SHTGE P +C +C F + +HVR H
Sbjct: 9 CKRVFHRQEHQVRHIR-SHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.5 bits (68), Expect = 0.093
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 155 RPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
+ Y C C + F ++++ H +H+ +KP+EC
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFEC 34
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 44.8 bits (101), Expect = 9e-06
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 7/47 (14%)
Frame = +2
Query: 83 CITCGASFVYPEHYKKHVRIHTGERPYVC-EI------CGKTFTTRD 202
C TC +F EH K+H+R HT E+P+ C EI CG+ F+ RD
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRD 118
Score = 33.9 bits (74), Expect = 0.017
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 155 RPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
+ YVCE C + F ++ H +H+++KP+ C
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTC 100
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 43.6 bits (98), Expect = 2e-05
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +2
Query: 50 KASHTGESPLKCIT--CGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
+A G+ KC C SF EH ++H R HT + ++C C +FT D N H
Sbjct: 8 RAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH 65
Score = 29.5 bits (63), Expect = 0.37
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHV 136
C K F R+ H + SHT C C +SF + +HV
Sbjct: 24 CTKSFTRKEHARRHFR-SHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 28.7 bits (61), Expect = 0.65
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEI--CGKTFTTRDNRNTHRFTHSDKKPYEC 253
KK G+ Y C+ C K+FT +++ H +H++ K + C
Sbjct: 5 KKSRAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFIC 49
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 38.7 bits (86), Expect = 6e-04
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCI--TCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNR 208
L+ +A G+ C C SF EH ++H R H + + C C + F D
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVL 71
Query: 209 NTH 217
N H
Sbjct: 72 NRH 74
Score = 30.7 bits (66), Expect = 0.16
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 125 KKHVRIHT-GERPYVCEI--CGKTFTTRDNRNTHRFTHSDKKPYEC 253
KK R H G+ + C C K+FT +++ H TH + K + C
Sbjct: 13 KKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSC 58
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 35.5 bits (78), Expect = 0.006
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 131 HVRIHTGERPYVCEI--CGKTFTTRDNRNTHRFT 226
H+R HTGE+P++C + C ++FT D H T
Sbjct: 96 HLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
Score = 28.3 bits (60), Expect = 0.87
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 26 RRLLEYHIKASHTGESPLKCIT--CGASFVYPEHYKKHVR-IHTGE 154
R L H++ SHTGE P C C SF + KH+R +H +
Sbjct: 90 RFALVAHLR-SHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEAD 134
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 250 VPSCGAGFMRKQLLYAHMSAIGHLAESIVVNQ--PRVTKVHTSNVATQIL 393
VP C F R L HM + H A+++ + P+ +H NVA ++
Sbjct: 110 VPECDRSFTRSDALAKHMRTV-HEADTLRPSDPIPKAHPMHPQNVANAMV 158
>SPCC645.11c |mug117||meiotically upregulated gene
Mug117|Schizosaccharomyces pombe|chr 3|||Manual
Length = 186
Score = 32.7 bits (71), Expect = 0.040
Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +2
Query: 5 CPKRF-KRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICG 181
CP + K R L YH +S+T S C YP + + C CG
Sbjct: 86 CPNAYMKYNRSLIYHGYSSYTASSCTAIYECEGD--YPARTGNEIIDEFDQLNLQCSACG 143
Query: 182 KTFTTRDNRNT 214
F DN NT
Sbjct: 144 TRFFNNDNENT 154
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 31.1 bits (67), Expect = 0.12
Identities = 24/77 (31%), Positives = 32/77 (41%)
Frame = +2
Query: 2 HCPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICG 181
+C K +K + L+YH H SP IT P H +PY CE+C
Sbjct: 356 NCDKAYKNQNGLKYHKLHGHC--SP---ITTPTPAPIP-----HQGFVVENKPYRCEVCS 405
Query: 182 KTFTTRDNRNTHRFTHS 232
K + + HR THS
Sbjct: 406 KRYKNLNGLKYHR-THS 421
>SPCC1281.06c |||acyl-coA desaturase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 479
Score = 28.3 bits (60), Expect = 0.87
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 194 TRDNRNTHRFTHSDKKPYECR 256
+RD+R HR+T +DK PY +
Sbjct: 144 SRDHRAHHRYTDTDKDPYNVK 164
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 25.8 bits (54), Expect = 4.6
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 274 MRKQLLYAHMSAIGHLAESIVVN-QPRVTK-VHTSNVATQILDVQTFETKKYETLFENEE 447
+RK +YA +IGH++ ++ + + R T + T++V QT++ +K LF ++
Sbjct: 18 LRKSRIYAPFRSIGHVSNAVPFDIEARGTHFLVTTSVGNTF---QTYDCEKLNLLFVGKQ 74
Query: 448 L 450
L
Sbjct: 75 L 75
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +2
Query: 71 SPLKCITCGASFVYPEHYKKHVR----IHTGERPYVCE 172
SP C+ C ASF + KKH++ ++ ER Y+ +
Sbjct: 206 SPRDCLFCAASFSSFDTCKKHMKASHSLYIPEREYLVD 243
>SPBC365.15 |alp4||gamma tubulin complex Spc97/GCP2 subunit
Alp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 25.4 bits (53), Expect = 6.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 240 FLSLCVKRCVLRLSRVVNVLPQISHT 163
FL C+K C+L SR++ V ++ +T
Sbjct: 684 FLDTCLKECMLTNSRLLKVQSKLLNT 709
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 25.0 bits (52), Expect = 8.1
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 444 LVFEKSFILFGFECLYVQYLRRHVASVHLRDPRL-VHDYGL 325
L F + + L CLY + + VHL RL + DYGL
Sbjct: 90 LFFSQMYNLLRSTCLYCHHFKLSKVKVHLFFCRLKLLDYGL 130
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 349 RVTKVHTSNVATQILDVQTFETKKYETLFENEELSLDASGKQPETAP 489
R+ + + ++ Q + +ET+ + NEE +DAS K P P
Sbjct: 2045 RIATILSGSLRRQKQGLMAYETESFRDYSPNEE--IDASAKLPMDMP 2089
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 93 HVMHFSGLSPVCEALMWYSSN 31
++ H S LSP C ++M +S+N
Sbjct: 63 NMFHLSCLSPPCTSMMGFSTN 83
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,970,165
Number of Sequences: 5004
Number of extensions: 34422
Number of successful extensions: 148
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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