Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0755
(582 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 71 2e-14
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 33 0.005
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 33 0.009
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 26 0.77
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 25 2.4
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 24 4.1
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 24 4.1
AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding pr... 24 4.1
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 4.1
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 71.3 bits (167), Expect = 2e-14
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGK 184
CP R+ L H++ HT + P+KC C ++F YK H + H GE+ Y CE C
Sbjct: 303 CPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPY 362
Query: 185 TFTTRDNRNTHRFTHSDKKPYEC 253
+ + +H H+D+KPY+C
Sbjct: 363 ASISMRHLESHLLLHTDQKPYKC 385
Score = 65.3 bits (152), Expect = 1e-12
Identities = 30/84 (35%), Positives = 39/84 (46%)
Frame = +2
Query: 2 HCPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICG 181
HC F L HI+ HT E P KC C + V K+H+R HTGE+P+ C C
Sbjct: 187 HCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCT 246
Query: 182 KTFTTRDNRNTHRFTHSDKKPYEC 253
+ H H+ +KPY C
Sbjct: 247 YASPDKFKLTRHMRIHTGEKPYSC 270
Score = 65.3 bits (152), Expect = 1e-12
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYK--KHVRIHTGERPYVCEICGKTFTTRDNR 208
L+ HI+ +HTGE P +C C ++ P+ +K +H+RIHTGE+PY C++C FT ++
Sbjct: 227 LKRHIR-THTGEKPFQCPHC--TYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSL 283
Query: 209 NTHRFTH--SDKKPYECR 256
H+ H +K ++C+
Sbjct: 284 KAHKMIHQVGNKPVFQCK 301
Score = 59.3 bits (137), Expect = 9e-11
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 HCPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICG 181
+C + LL H+K +H+ + P KC+ C F + HV HTG +P+ C+ C
Sbjct: 131 YCNYTSNKLFLLSRHLK-THSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCD 189
Query: 182 KTFTTRDNRNTH-RFTHSDKKPYEC 253
FTT H R+ H+ ++P++C
Sbjct: 190 NCFTTSGELIRHIRYRHTHERPHKC 214
Score = 48.8 bits (111), Expect = 1e-07
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGK 184
C F R + H K +H GE +C C + + H + H+ +HT ++PY C+ C +
Sbjct: 332 CDSTFPDRYSYKMHAK-THEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQ 390
Query: 185 TFTTRDNRNTH 217
TF + H
Sbjct: 391 TFRQKQLLKRH 401
Score = 41.9 bits (94), Expect = 1e-05
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 128 KHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYECR 256
+H++ H+ +RP+ C +C + F T + H TH+ KP+ C+
Sbjct: 144 RHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186
Score = 34.3 bits (75), Expect = 0.003
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Frame = +2
Query: 2 HCPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTG---------E 154
+CP R LE H+ HT + P KC C +F + K+H+ +
Sbjct: 359 YCPYASISMRHLESHLLL-HTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKA 417
Query: 155 RPYVCEICGKTFTTRDNRNTHRFTH 229
+ ++C C + F + N H H
Sbjct: 418 KTHICPTCKRPFRHKGNLIRHMAMH 442
Score = 27.5 bits (58), Expect = 0.34
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 128 KHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
K + TG Y+C C T + H THS+ +P++C
Sbjct: 117 KRTQQSTGST-YMCNYCNYTSNKLFLLSRHLKTHSEDRPHKC 157
Score = 24.2 bits (50), Expect = 3.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 211 HAPLHAQRQEALRVPSCGAGFMRKQLLYAHMS 306
H LH Q+ + C F +KQLL HM+
Sbjct: 373 HLLLHTD-QKPYKCDQCAQTFRQKQLLKRHMN 403
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 33.5 bits (73), Expect = 0.005
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH-RFTH 229
+C CG H + H +H R + C +C T+T DN TH +F H
Sbjct: 501 RCKLCGKVVT---HIRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCKFKH 547
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 32.7 bits (71), Expect = 0.009
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +2
Query: 62 TGESPL--KCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
TG P C++C + H H IH + + C +CG+ FT RDN H
Sbjct: 892 TGTFPTLYSCVSCHKTVSNRWH---HANIHRPQS-HECPVCGQKFTRRDNMKAH 941
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 26.2 bits (55), Expect = 0.77
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 318 PGRVHSREPAEGHEGAH*QRGDADTGRT 401
PGR H EPA G G R DA GR+
Sbjct: 67 PGRSHPAEPAPGGNGPF-VRPDAPQGRS 93
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 24.6 bits (51), Expect = 2.4
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 4/50 (8%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKHV----RIHTGERPYVCEICGKTFTTRDNRNTH 217
+C C S+ Y+KH RI C IC K F+ R + H
Sbjct: 350 QCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLH 399
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 4.1
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +2
Query: 68 ESPLKCITCGASFVYP-----EHY-KKHVRIHTGERPYVCEICG 181
E P KC C SFV P +HY + + ++ C ICG
Sbjct: 242 ELPFKCYVCRESFVDPIVTKCKHYFCERCALAQYKKSSRCAICG 285
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 23.8 bits (49), Expect = 4.1
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Frame = +2
Query: 68 ESPLKCITCGASFVYP-----EHY-KKHVRIHTGERPYVCEICG 181
E P KC C SFV P +HY + + ++ C ICG
Sbjct: 242 ELPFKCYVCRESFVDPIVTKCKHYFCERCALAQYKKSSRCAICG 285
>AY146717-1|AAO12077.1| 188|Anopheles gambiae odorant-binding
protein AgamOBP14 protein.
Length = 188
Score = 23.8 bits (49), Expect = 4.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 333 YGLGQVTNCAHVRVEQLL 280
YGLGQ NC + EQ L
Sbjct: 113 YGLGQDYNCFRQKAEQCL 130
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect = 4.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 445 ELSLDASGKQPETAPG 492
EL + ASG QP APG
Sbjct: 421 ELQIIASGMQPRKAPG 436
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,372
Number of Sequences: 2352
Number of extensions: 9539
Number of successful extensions: 37
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -