Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0755
(582 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 55 4e-08
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 52 3e-07
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 52 3e-07
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 49 2e-06
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 40 0.002
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 40 0.002
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 39 0.002
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 39 0.003
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 39 0.003
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 38 0.004
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 38 0.005
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 37 0.009
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 37 0.009
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 37 0.011
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 36 0.015
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 36 0.026
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 36 0.026
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 33 0.031
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 35 0.034
At1g01930.1 68414.m00111 zinc finger protein-related contains Pf... 35 0.045
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 32 0.24
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 0.56
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 31 0.56
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 31 0.74
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 31 0.74
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 30 1.3
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 1.7
At4g10710.1 68417.m01751 transcriptional regulator-related simil... 29 1.7
At4g04885.1 68417.m00711 pre-mRNA cleavage complex-related conta... 29 1.7
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 29 1.7
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 2.3
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 29 2.3
At5g22355.1 68418.m02608 DC1 domain-containing protein contains ... 29 3.0
At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase f... 29 3.0
At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase f... 29 3.0
At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase f... 29 3.0
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 28 4.0
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 28 4.0
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 5.2
At4g04320.2 68417.m00617 malonyl-CoA decarboxylase family protei... 28 5.2
At4g04320.1 68417.m00616 malonyl-CoA decarboxylase family protei... 28 5.2
At3g20460.1 68416.m02590 sugar transporter, putative similar to ... 28 5.2
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 28 5.2
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 28 5.2
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 28 5.2
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 27 6.9
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 27 6.9
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 27 6.9
At1g63240.1 68414.m07148 expressed protein 27 6.9
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 27 9.1
At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein ... 27 9.1
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 27 9.1
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 27 9.1
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKK--HVRIHTGERPYVCEI- 175
C K+F+ + L H + H E P +C G S + + + H+R+HTGERPY+C++
Sbjct: 1245 CGKKFRAHKYLVLHQRV-HKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVD 1303
Query: 176 -CGKTFTTRDNRNTHR 220
CG +F + + HR
Sbjct: 1304 GCGLSFRFVSDYSRHR 1319
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 62 TGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKK 241
T P +C G + K ++ H R E CGK F H+ H D++
Sbjct: 1210 TTTHPNRCYLEGCKMTFES--KAKLQTHKRNR-CTHEGCGKKFRAHKYLVLHQRVHKDER 1266
Query: 242 PYEC 253
P+EC
Sbjct: 1267 PFEC 1270
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +2
Query: 50 KASHT-GESPLKCIT--CGASFVYPEHYKKHVRIHTGERPYVC--EICGKTFTTRDNRNT 214
K SH GE C CG F+ K+H IHTGER Y+C E CGK F+ N +
Sbjct: 98 KHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRS 157
Query: 215 HRFTHSDKKPYEC 253
H THS + + C
Sbjct: 158 HMKTHSQENYHIC 170
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCIT--CGASFVYPEHYKKHVRIHTGERPYVCEIC 178
C K+F L+ H HTGE C CG +F + + H++ H+ E ++C
Sbjct: 115 CGKKFLDSSKLKRHYLI-HTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYS 173
Query: 179 G 181
G
Sbjct: 174 G 174
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 52.0 bits (119), Expect = 3e-07
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKCIT--CGASFVYPEHYKKHVRIHTGERPYVC--E 172
C K F + L H + H+ + PLKC C +F + +H+R+HTG RPYVC
Sbjct: 1267 CGKNFFSHKYLVQHQRV-HSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEP 1325
Query: 173 ICGKT--FTTRDNRNTHRFTHSDKK 241
CG+T F + +R+ + HS KK
Sbjct: 1326 DCGQTFRFVSDFSRHKRKTGHSVKK 1350
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 164 VCEI--CGKTFTTRDNRNTHRFTHSDKKPYEC 253
+C I CGK F + H+ HSD +P +C
Sbjct: 1261 ICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKC 1292
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 83 CITCGASFVYPEHYKKHVRIHTGERPYVCEI--CGKTFTTRDNRNTHRFTHSDK 238
C CGA F P H K+H++ H+ ER + C + C ++ +D+ N H TH K
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGK 121
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKC--ITCGASFVYPEHYKKHVRIHTGERPYVC 169
C F + L+ H+KA H P C CG F Y KH ++G Y C
Sbjct: 312 CSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHE--NSGYHVYTC 366
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +2
Query: 62 TGESPLKC--ITCGASFVYP----EHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
TG+ + C I CG +F YP +H HV++ + E C K FT + +H
Sbjct: 210 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH 267
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H +I G + Y C+ CG F+ RD+ T
Sbjct: 124 IKKHFCRKH-GEKKWKCEKCSKKYAVQSDWKAHSKI-CGTKEYKCD-CGTLFSRRDSFIT 180
Query: 215 HR 220
HR
Sbjct: 181 HR 182
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
+VCEIC K F N HR H+
Sbjct: 61 FVCEICNKGFQRDQNLQLHRRGHN 84
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + CE C K + + + H K+ Y+C
Sbjct: 125 KKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTKE-YKC 166
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H +I G + Y C+ CG F+ RD+ T
Sbjct: 126 IKKHFCRKH-GEKKWKCDKCSKKYAVQSDWKAHSKI-CGTKEYKCD-CGTLFSRRDSFIT 182
Query: 215 HR 220
HR
Sbjct: 183 HR 184
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
+VCEIC K F N HR H+
Sbjct: 63 FVCEICNKGFQRDQNLQLHRRGHN 86
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H + G R Y C+ CG F+ +D+ T
Sbjct: 146 IKKHYSRKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTLFSRKDSFIT 202
Query: 215 HR 220
HR
Sbjct: 203 HR 204
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + CE C K + + + H T ++ Y+C
Sbjct: 147 KKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTRE-YKC 188
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
+VCEIC K F N HR H+
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHN 105
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H +I G R Y C+ CG F+ +D T
Sbjct: 146 IKKHFCRKH-GEKKWKCEKCSKFYAVQSDWKAHTKI-CGTRDYRCD-CGTLFSRKDTFIT 202
Query: 215 HR 220
HR
Sbjct: 203 HR 204
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
+VCEIC K F N HR H+
Sbjct: 82 FVCEICNKGFQRDQNLQLHRRGHN 105
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H +I G + Y C+ CG F+ +D+ T
Sbjct: 132 IKKHFSRKH-GEKKWKCDKCSKKYAVMSDWKAHSKI-CGTKEYRCD-CGTLFSRKDSFIT 188
Query: 215 HR 220
HR
Sbjct: 189 HR 190
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
++CE+C K F N HR H+
Sbjct: 68 FICEVCNKGFKRDQNLQLHRRGHN 91
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H + G + Y C+ CG F+ RD+ T
Sbjct: 156 IKKHFFRKH-GEKKWKCEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTLFSRRDSFIT 212
Query: 215 HR 220
HR
Sbjct: 213 HR 214
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + CE C K + + + H T K+ Y+C
Sbjct: 157 KKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAKTCGTKE-YKC 198
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H + G R Y C+ CG F+ RD+ T
Sbjct: 133 IKKHFCRKH-GEKKWKCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIFSRRDSFIT 189
Query: 215 HR 220
HR
Sbjct: 190 HR 191
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
++CEICGK F N HR H+
Sbjct: 70 FLCEICGKGFQRDQNLQLHRRGHN 93
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + CE C K + + + H T ++ Y C
Sbjct: 134 KKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTRE-YRC 175
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H + G + Y C+ CG F+ RD+ T
Sbjct: 146 IKKHYYRKH-GEKKWKCEKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYIT 202
Query: 215 HR 220
HR
Sbjct: 203 HR 204
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + CE C K + + + H T K+ Y C
Sbjct: 147 KKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKE-YRC 188
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H + G + Y C+ CG F+ RD+ T
Sbjct: 145 IKKHYYRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIFSRRDSYIT 201
Query: 215 HR 220
HR
Sbjct: 202 HR 203
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + C+ C K + + + H T K+ Y C
Sbjct: 146 KKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE-YRC 187
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
++CE+C K F N HR H+
Sbjct: 82 FLCEVCNKGFQREQNLQLHRRGHN 105
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 36.7 bits (81), Expect = 0.011
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H + G + Y C+ CG F+ RD+ T
Sbjct: 144 IKKHYYRKH-GEKKWKCDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTLFSRRDSFIT 200
Query: 215 HR 220
HR
Sbjct: 201 HR 202
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + C+ C K + + + H T K+ Y C
Sbjct: 145 KKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTKE-YRC 186
Score = 27.9 bits (59), Expect = 5.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
++CE+C K F N HR H+
Sbjct: 81 FICEVCNKGFQREQNLQLHRRGHN 104
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + +K H +I G R + C+ CG F+ +D+ +
Sbjct: 70 IKKHFSRKH-GEKKWKCDKCSKKYAVISDWKAHNKI-CGSREFRCD-CGTLFSRKDSFIS 126
Query: 215 HR 220
HR
Sbjct: 127 HR 128
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE C C + +K H + G R Y C+ CG F+ RD+ T
Sbjct: 129 IKKHFCRKH-GEKKWTCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIFSRRDSFIT 185
Query: 215 HR 220
HR
Sbjct: 186 HR 187
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
++CE+CGK F N HR H+
Sbjct: 66 FLCEVCGKGFQRDQNLQLHRRGHN 89
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + CE C K + + + H T ++ Y C
Sbjct: 130 KKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSKTCGTRE-YRC 171
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 35.5 bits (78), Expect = 0.026
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +2
Query: 35 LEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNT 214
++ H H GE KC C + K H + G + Y C+ CG F+ RD+ T
Sbjct: 163 IKKHFCRKH-GEKKWKCDKCSKKYAVQSDCKAHSKT-CGTKEYRCD-CGTLFSRRDSFIT 219
Query: 215 HR 220
HR
Sbjct: 220 HR 221
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
+VCEIC K F N HR H+
Sbjct: 99 FVCEICNKGFQRDQNLQLHRRGHN 122
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 125 KKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KKH GE+ + C+ C K + + + H T K+ Y C
Sbjct: 164 KKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKE-YRC 205
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 33.5 bits (73), Expect(2) = 0.031
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESP-----LKCITCGASFVYPEHYKKHVR-IHTGE 154
C F RR+LLE H++ H + L+CI CG+ F E HV+ +H E
Sbjct: 501 CLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPSE 556
Score = 20.6 bits (41), Expect(2) = 0.031
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = +2
Query: 146 TGERPYVCEICGKTFTTRDNRNTH 217
+G +VC+ CG F + H
Sbjct: 594 SGVHKFVCKFCGLKFNLLPDLGRH 617
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 35.1 bits (77), Expect = 0.034
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 92 CGASFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDK 238
CG F P +IH G + C IC KTF +N H + H +
Sbjct: 161 CGKRFWIPSP----AQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSE 205
>At1g01930.1 68414.m00111 zinc finger protein-related contains Pfam
PF00023: Ankyrin repeat; contains Pfam PF00096: Zinc
finger, C2H2 type domain and Prosite PS00028: Zinc
finger, C2H2 type, domain
Length = 580
Score = 34.7 bits (76), Expect = 0.045
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 271 FMRKQLLYAHMSAIGHLAESIVVNQPRVTKVHT 369
F Q +Y ++ I H+ E I VN+P VTK +T
Sbjct: 345 FKESQRIYNQLTQIAHVTEEIFVNRPEVTKANT 377
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.3 bits (70), Expect = 0.24
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 119 HYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
HYK R H G +P+ C +CGK F + + TH
Sbjct: 252 HYK---RKH-GSKPFACRMCGKAFAVKGDWRTH 280
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 119 HYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
HYK R H G +P++C CGK F R + TH
Sbjct: 291 HYK---RKH-GIKPFMCRKCGKAFAVRGDWRTH 319
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.1 bits (67), Expect = 0.56
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 119 HYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
HYK R H G RP+ C CGK F + + TH
Sbjct: 330 HYK---RKH-GVRPFACRRCGKAFAVKGDWRTH 358
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 30.7 bits (66), Expect = 0.74
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKHVRI--HTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KC C F EH +H++I H+G P C +C K + ++ H K+ EC
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHLIGPLPKQ--EC 72
Query: 254 RXXXXXXXXXXCST 295
+ C T
Sbjct: 73 KNIFSLRGCRFCMT 86
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 5 CPKRFKRRRLLEYHIKASHTGESPLKC--ITCGASFVYPEHYKKHVRIHTGERPYVC 169
C F + L+ H+KA H P C CG F Y KH ++G Y C
Sbjct: 224 CSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHE--NSGYHVYTC 278
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +2
Query: 62 TGESPLKC--ITCGASFVYP----EHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
TG+ + C I CG +F YP +H HV++ + E C K FT + +H
Sbjct: 122 TGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH 179
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 146 TGERPYVCEICGKTFTTRDNRNTHRFTHSD 235
T + +VC +CGK+F T H+ H D
Sbjct: 113 TAVKSHVCSVCGKSFATGQALGGHKRCHYD 142
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKHVRI--HTGERPYVCEICGKTFTTRDNRNTHRFTHSDKKPYEC 253
KC C F EH +H+RI H+ P C IC K + D+ H K+ EC
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREHLIGPLPKQ--EC 63
Query: 254 RXXXXXXXXXXCST 295
+ C T
Sbjct: 64 KNIFSIRGCRFCLT 77
>At4g10710.1 68417.m01751 transcriptional regulator-related similar
to chromatin-specific transcription elongation factor
FACT 140 kDa subunit (GI:5499741) [Homo sapiens]
Length = 1074
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +1
Query: 364 HTSNVA-TQILDVQTFETKKYETLFENEELSLDA--SGKQPET 483
+ SNVA T ++D + ++K YE L + E ++DA SG++ T
Sbjct: 311 YCSNVARTYLIDATSLQSKAYEVLLKAHEAAIDALRSGRKINT 353
>At4g04885.1 68417.m00711 pre-mRNA cleavage complex-related contains
weak similarity to Pre-mRNA cleavage complex II protein
Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo sapiens]
Length = 808
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 65 GESPLKCITCGASFVYPEHYKKHVRIH 145
G+ P +C TCG F E + KH+ H
Sbjct: 647 GDLPRQCTTCGLRFKCQEEHSKHMDWH 673
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 116 EHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKK 241
E Y K R T R Y CE CGK F + HR +H +
Sbjct: 159 EGYNKINRATTKGR-YKCETCGKVFKSYQALGGHRASHKKNR 199
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/47 (31%), Positives = 18/47 (38%)
Frame = +2
Query: 101 SFVYPEHYKKHVRIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDKK 241
S VYP K R + Y C++CGK F H H K
Sbjct: 78 SEVYPRKSKLQKRPESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTK 124
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 119 HYKKHVRIHTGERPYVCEICGKTFTTRDNRNTH 217
HYK R H G +P+ C +CGK + + TH
Sbjct: 219 HYK---RKH-GHKPFSCRLCGKLLAVKGDWRTH 247
>At5g22355.1 68418.m02608 DC1 domain-containing protein contains
Pfam PF03107: DC1 domain; similar to ULI3 [Arabidopsis
thaliana] GI:17225050
Length = 664
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 110 YPEHYKKHVRIHTGER-PYVCEICGKTF 190
+P H + +++H R P C +CGKTF
Sbjct: 65 HPSHPQHTLKLHNSLRNPCKCNLCGKTF 92
>At4g22410.1 68417.m03238 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 340
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
Y C +CGK F R ++ +H +THS
Sbjct: 25 YACLVCGKYFQGR-SQKSHAYTHS 47
>At4g22350.1 68417.m03231 ubiquitin carboxyl-terminal hydrolase
family protein similar to U4/U6.U5 tri-snRNP-associated
65 kDa protein [Homo sapiens] GI:13926071; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 510
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
Y C +CGK F R ++ +H +THS
Sbjct: 109 YACLVCGKYFQGR-SQKSHAYTHS 131
>At4g22290.1 68417.m03224 ubiquitin carboxyl-terminal hydrolase
family protein similar to pVHL-interacting
deubiquitinating enzyme 1 type II [Homo sapiens]
GI:18698435; contains Pfam profile PF00443: Ubiquitin
carboxyl-terminal hydrolase
Length = 974
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTHS 232
Y C +CGK F R ++ +H +THS
Sbjct: 571 YACLVCGKYFQGR-SQKSHAYTHS 593
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 20 KRRRLLEYHIKASHTGESPLKCITCGASFVYPEHYKKHVRI-HTGERPYVCEICGKTFTT 196
K R LLE +AS G +P+ T V K ++ H + P +C +CGK F +
Sbjct: 96 KPRVLLEALAEAS--GCTPIGVTTTEGEVVKKPRKKGSTQLTHLPQGPPMCNVCGKGFAS 153
Query: 197 RDNRNTHRFTHSDK 238
H H D+
Sbjct: 154 WKAVFGHLRQHKDR 167
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 229 QRQEALRVPSCGAGFMRKQLLYAHMSAIGHLAESIVVNQPRVTKVHTSNV 378
Q QE R CG GF+ + L HM+ E IV++ T+ +S +
Sbjct: 88 QLQELRRCRECGKGFVSSKALCGHMACHSE-REKIVMDSQSDTEASSSPI 136
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 155 RPYVCEICGKTFTTRDNRNTHRFTHSDKKP 244
R Y C +CGK+F++ H+ +H +KP
Sbjct: 95 RDYKCTVCGKSFSSYQALGGHKTSH--RKP 122
>At4g04320.2 68417.m00617 malonyl-CoA decarboxylase family protein
contains weak similarity to Malonyl-CoA decarboxylase,
mitochondrial precursor (EC 4.1.1.9) (MCD)
(Swiss-Prot:O95822) [Homo sapiens]; contains Pfam
profile PF05292: Malonyl-CoA decarboxylase (MCD)
Length = 517
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 105 KEAPHVMHFSGLSPVCEALMWYSSNLLRLNRLGQ 4
K+ PHV F+ LSP+ + W S L +R +
Sbjct: 329 KDMPHVSTFATLSPIPGFMQWLLSKLSSQSRFAE 362
>At4g04320.1 68417.m00616 malonyl-CoA decarboxylase family protein
contains weak similarity to Malonyl-CoA decarboxylase,
mitochondrial precursor (EC 4.1.1.9) (MCD)
(Swiss-Prot:O95822) [Homo sapiens]; contains Pfam
profile PF05292: Malonyl-CoA decarboxylase (MCD)
Length = 518
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 105 KEAPHVMHFSGLSPVCEALMWYSSNLLRLNRLGQ 4
K+ PHV F+ LSP+ + W S L +R +
Sbjct: 330 KDMPHVSTFATLSPIPGFMQWLLSKLSSQSRFAE 363
>At3g20460.1 68416.m02590 sugar transporter, putative similar to
ERD6 protein [Arabidopsis thaliana] GI:3123712,
sugar-porter family proteins 1 and 2 [Arabidopsis
thaliana] GI:14585699, GI:14585701; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 488
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -2
Query: 500 QLGPGAVSGCFPLASRLNSSFSKRVSYFLVSNVCTSSICVATLLVCTFVTLGWFTTMDSA 321
++ P V G F + L S V+Y L S + + + + + C F +G F +S
Sbjct: 170 EIAPKKVRGTFSAINSLVMCASVAVTYLLGSVISWQKLALISTVPCVFEFVGLFFIPESP 229
Query: 320 R 318
R
Sbjct: 230 R 230
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTH 229
YVCEIC + F N HR H
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRH 92
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 125 KKHVRI-HTGERPYVCEICGKTFTTRDNRNTH 217
KKH R H+ + ++CE C K + + + H
Sbjct: 135 KKHFRRKHSNHKQWICERCSKGYAVQSDYKAH 166
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTH 229
YVCEIC + F N HR H
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRH 61
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +2
Query: 137 RIHTGERPYVCEICGKTFTTRDNRNTHRFTHSDK 238
+I G + C +C KTF +N H + H +
Sbjct: 93 QILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQ 126
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +2
Query: 158 PYVCEICGKTFTTRDNRNTHRFTHSDKKP 244
PY C +C K F + H+ +H K P
Sbjct: 105 PYKCNVCEKAFPSYQALGGHKASHRIKPP 133
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 20 KRRRLLEYHIKASHTGESPLK--CITCGASFVYPEHYKKHVRIHTG 151
+R LE H S P+K C CGA F + H+R H G
Sbjct: 57 RRSAALEGHAPPSPKRVKPVKHECPICGAEFAVGQALGGHMRKHRG 102
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 161 YVCEICGKTFTTRDNRNTHRFTH 229
Y+CEIC + F N HR H
Sbjct: 67 YICEICNQGFQRDQNLQMHRRRH 89
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 125 KKHVRI-HTGERPYVCEICGKTFTTRDNRNTH 217
KKH R H+ + +VCE C K + + + H
Sbjct: 132 KKHFRRKHSNHKQWVCERCSKGYAVQSDYKAH 163
>At1g63240.1 68414.m07148 expressed protein
Length = 548
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 334 VVNQPRVTKVHTSNVATQILDVQTFETK-KYETLFENEELSLDASGKQPE 480
V N + + ++ + +Q +Q E++ K + +FE+E+LS D+ K PE
Sbjct: 170 VENVENFSNITSTPLRSQPERMQKLESRAKTQCVFEDEDLSSDSDNKLPE 219
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKH-VRIHTGERPYVCE 172
+C CG F Y +++K H +H VCE
Sbjct: 65 RCEECGKGFRYEKYFKNHRSMMHLSPNEKVCE 96
>At4g25610.1 68417.m03689 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 586
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 80 KCITCGASFVYPEHYKKHVRIHTGER 157
KC C F P ++++H R+H +R
Sbjct: 62 KCEKCSREFCSPVNFRRHNRMHRRQR 87
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 152 ERPYVCEICGKTFTTRDNRNTHRFTHSDKKP 244
++ Y C +CGK+F + H+ +H +KP
Sbjct: 91 QKDYKCSVCGKSFPSYQALGGHKTSH--RKP 119
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +2
Query: 83 CITCGASFVYPEHYKKHV-RIH 145
C TC +F YP+ +K H+ ++H
Sbjct: 206 CRTCSQTFFYPKKFKNHLEQVH 227
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,531,565
Number of Sequences: 28952
Number of extensions: 186223
Number of successful extensions: 754
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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