Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0753
         (802 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g56660.1 68414.m06516 expressed protein                             33   0.29 
At4g09290.1 68417.m01537 hypothetical protein                          29   2.7  
At3g14360.1 68416.m01817 lipase class 3 family protein low simil...    29   2.7  
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ...    29   4.7  
At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit (...    29   4.7  
At5g64070.1 68418.m08046 phosphatidylinositol 4-kinase (PI4K) ne...    28   6.3  
At5g14440.1 68418.m01690 surfeit locus 2 protein-related / SURF2...    28   6.3  
At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative...    28   6.3  
At4g31590.1 68417.m04487 glycosyl transferase family 2 protein s...    28   6.3  
At2g30370.1 68415.m03696 allergen-related weak similarity to pol...    28   8.3  

>At1g56660.1 68414.m06516 expressed protein
          Length = 522

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 18/75 (24%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
 Frame = +3

Query: 516 TKRESRQKNNDHRSNKEKTSKQASEEH*K*VNEICHRRPR---EDDGCIEKQKN--LTYR 680
           T++E   +  DH+  K+K +K  +++    ++E+C +  +   +D+G  +++KN     +
Sbjct: 310 TEQEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETKDKDDDEGETKQKKNKKKEKK 369

Query: 681 YYKSQWDFKQNLKRE 725
             K + D K++ K+E
Sbjct: 370 SEKGEKDVKEDKKKE 384


>At4g09290.1 68417.m01537 hypothetical protein
          Length = 376

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +1

Query: 520 KEKVDRKIMTTGPTKRKLPNRQAKNIENRLTKYAIGDPEKTMVVSRSKKILR 675
           KEK D    +   TK +    +A   +NRL   +  D EKTM + R K + R
Sbjct: 300 KEKADGDTSSVPKTKPEEAKEKADAEDNRLLPESDEDEEKTMRLERVKAVRR 351


>At3g14360.1 68416.m01817 lipase class 3 family protein low
           similarity to Chain A, Lipase Ii From Rhizopus Niveus
           GI:1942798; contains Pfam profile PF01764: Lipase
          Length = 518

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -3

Query: 683 VSIRKIFLLLDTTIVFSGSPMAYFVNLFS 597
           + +RKI  LL T + F+G  + +F+NLFS
Sbjct: 76  ILVRKIIRLLRTPMEFTGFVVDFFLNLFS 104


>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
           Pfam PF00400: WD domain, G-beta repeats;
          Length = 1327

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 603 IFNVLRLPVWKFSLCWTGGHYFSVYFLFWF 514
           +  VL +  WK +  +TGGH  S+Y L  F
Sbjct: 112 VIRVLSMITWKLARRYTGGHKGSIYCLMNF 141


>At4g39350.1 68417.m05570 cellulose synthase, catalytic subunit
           (Ath-A) identical to gi:2827141
          Length = 1084

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 474 CMKKWNS*MFLLCQTKRESRQKNNDHRSNKEKTSKQ 581
           C  KW     L C  +++S+ K  D ++N ++TSKQ
Sbjct: 661 CWPKW---CCLCCGLRKKSKTKAKDKKTNTKETSKQ 693


>At5g64070.1 68418.m08046 phosphatidylinositol 4-kinase (PI4K) nearly
            identical to gi:4467359
          Length = 1121

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 667  FFCFSIQPSS--SLGLLWHISLTYFQCSSLACLEVFSLLDRW 548
            F CF   P +  +L   +H+SLT  QC SL    + S LD W
Sbjct: 1064 FPCFKGGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAW 1105


>At5g14440.1 68418.m01690 surfeit locus 2 protein-related / SURF2
           protein-related contains weak hit to Pfam profile
           PF05477: Surfeit locus protein 2 (SURF2)
          Length = 291

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 18/70 (25%), Positives = 33/70 (47%)
 Frame = +3

Query: 513 QTKRESRQKNNDHRSNKEKTSKQASEEH*K*VNEICHRRPREDDGCIEKQKNLTYRYYKS 692
           + K++ ++KNN  + NK+   K+ + E     +EI H    E+D  +E++          
Sbjct: 141 EDKKKKKKKNNKKKKNKKSVEKKKNGEDV--ADEIEH----ENDEAVEEELEFWMPPDGE 194

Query: 693 QWDFKQNLKR 722
           +WDF     R
Sbjct: 195 RWDFDDGRDR 204


>At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative
            strong similarity to gi:4467359
          Length = 1116

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 667  FFCFSIQPSS--SLGLLWHISLTYFQCSSLACLEVFSLLDRW 548
            F CF   P +  +L   +H+SLT  QC SL    + S LD W
Sbjct: 1059 FPCFKGGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAW 1100


>At4g31590.1 68417.m04487 glycosyl transferase family 2 protein
           similar to cellulose synthase from Agrobacterium
           tumeficiens [gi:710492] and Agrobacterium radiobacter
           [gi:710493]; contains Pfam glycosyl transferase, group 2
           family protein domain PF00535
          Length = 692

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 635 RRRWLYREAKKSYV*ILQITMGFQTKS*TRNWMKFQINRLWCQIEFLEVES 787
           R RWL+  A K ++ +  + +GF+  +  R W  FQ   L      LE++S
Sbjct: 102 RDRWLFT-AIKLFLAVSLVILGFEIVAYFRGWHYFQSPSLHIPTSTLEIQS 151


>At2g30370.1 68415.m03696 allergen-related weak similarity to pollen
           major allergen 2 protein [Juniperus ashei]
           gi|9955725|emb|CAC05582
          Length = 230

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/37 (32%), Positives = 26/37 (70%)
 Frame = -2

Query: 195 TINILNNHIPNSICISRSTFSLQFPFFYIIKLQFALC 85
           ++++L++ +P+S+  S +T + +F  FY++ L F LC
Sbjct: 9   SLSLLSSSLPSSLQPSENTRA-KFSLFYLLLLFFVLC 44


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,536,303
Number of Sequences: 28952
Number of extensions: 376287
Number of successful extensions: 1055
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1054
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)