Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0752
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.8  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   8.4  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 255 VGGAAASNRHLSTLCRLPHVVFGDGL 178
           +G     + HLS L RL + +FG GL
Sbjct: 851 LGKICTLHHHLSKLIRLFNEIFGHGL 876


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 497 PGNVCRVCPG 468
           PG  C+ CPG
Sbjct: 101 PGRCCKTCPG 110


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +2

Query: 629 PGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMTRLERR 775
           P  +  + + + P S        SKIG+  T + +V+F +  +   E+R
Sbjct: 12  PIILLSKILGIAPISYKNSNVNYSKIGIVQTVAYFVIFIILTIVFFEKR 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,414
Number of Sequences: 336
Number of extensions: 3645
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)