Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0752
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784           34   0.15 
01_01_0219 + 1863478-1864041,1864459-1865109                           33   0.19 
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    33   0.34 
05_06_0149 - 25991761-25993181,25993246-25993324                       31   1.4  
01_06_1411 + 37127098-37128279                                         30   1.8  
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566...    30   2.4  
02_05_0464 - 29256887-29257765,29258455-29258538                       30   2.4  
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287...    30   2.4  
11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142     29   4.2  
03_02_0816 + 11487811-11488708,11488835-11489235                       29   5.5  
01_05_0789 + 25231013-25231570,25231684-25231761,25232590-252326...    29   5.5  
06_03_0332 + 19652207-19652995                                         28   7.3  
09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757     28   9.7  
06_03_0315 + 19486006-19486250,19486346-19487281,19488823-194890...    28   9.7  
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879     28   9.7  
04_04_0864 - 28852252-28854582                                         28   9.7  
02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141     28   9.7  
01_05_0164 + 18827390-18827710                                         28   9.7  

>05_02_0151 - 7115201-7115668,7115851-7116137,7117355-7117784
          Length = 394

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 468 ARTDPADVARVESRXSYAPIGRATWSPRLAPARSPPWGTTSPPRITRRP 614
           A + PA    + +  + + +  AT SPR A   +PPW T  PP I   P
Sbjct: 82  ASSSPAPADPMPTPAASSALAPATSSPRPASPPTPPWTTAPPPGIAAPP 130


>01_01_0219 + 1863478-1864041,1864459-1865109
          Length = 404

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 23/68 (33%), Positives = 30/68 (44%)
 Frame = -3

Query: 373 HTCTCSGWHRAALRSTNARTFGVRVVSCGEGFVDPRRAVCGRRGCIQSPLEHIVPSSSRS 194
           H  T + W + +      R   V VVS    F   R +  GRRGC+    EH +P+    
Sbjct: 265 HNITAAQWRKGSQFFEMDRALAVEVVSDERYFPAFRDSCAGRRGCLID--EHYIPTLVSL 322

Query: 193 LRGWP*NA 170
           LR W  NA
Sbjct: 323 LR-WRRNA 329


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P++ P  SPP  T SPP IT  P P D
Sbjct: 616 PKITPYPSPPEVTPSPPEITPYPSPPD 642



 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P + P  SPP  T SPP IT  P P +
Sbjct: 584 PEITPYPSPPEITPSPPEITPYPSPPE 610



 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P +AP  SPP    SPP IT  P P +
Sbjct: 444 PEIAPYPSPPEIVPSPPEITPYPSPPE 470



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P + P  SPP    SPP+IT  P P +
Sbjct: 600 PEITPYPSPPEVVPSPPKITPYPSPPE 626



 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P + P  SPP  T  PP IT  P P +
Sbjct: 568 PEITPYPSPPEVTPGPPEITPYPSPPE 594



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P + P  SPP    SPP IT  P P +
Sbjct: 460 PEITPYPSPPEIVPSPPEITPYPSPPE 486



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 546 PRLAPARSPPWGTTSPPRITRRPCPTD 626
           P + P  SPP    SPP IT  P P +
Sbjct: 508 PEITPYPSPPEIVPSPPEITPYPSPPE 534


>05_06_0149 - 25991761-25993181,25993246-25993324
          Length = 499

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = +3

Query: 189 RRLREEDGTMCSSGDWMQPRRPQTALRG---STKPSPQLTTLTPKVRA 323
           +R+ E  G + +S DW+QP+  +    G     KP+P++  + P V A
Sbjct: 223 KRMTEAKGVLVNSFDWLQPKALKALAAGVCVPDKPTPRVYCIGPLVDA 270


>01_06_1411 + 37127098-37128279
          Length = 393

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 1/136 (0%)
 Frame = -3

Query: 586 VVPQGGLLAGASRGDHVALPIGAYEXRDSTRATSAGSVRANQQLSYLGSLLRVVCC-CIS 410
           VV   G+L GAS G  +      +   ++  +  A +V A   LS++ S +  +C    +
Sbjct: 170 VVGNSGILLGASHGALIDSHAAVFRLNNARISGFAANVGAKTNLSFINSNVLHLCARRPN 229

Query: 409 CSRALASVSEPSHTCTCSGWHRAALRSTNARTFGVRVVSCGEGFVDPRRAVCGRRGCIQS 230
           C         P     C   H   + S NA +  +   S      DPR  V   R     
Sbjct: 230 CFCHPYGDGVPILLYICQAAHFLDVASCNASSRSLHAASI--SVTDPRLDVLCARIVKYY 287

Query: 229 PLEHIVPSSSRSLRGW 182
            L   V  + R+   W
Sbjct: 288 SLRRFVAETGRAAEEW 303


>08_02_0980 +
           23255992-23256408,23256480-23256517,23256606-23256654,
           23256787-23256848,23256876-23256938,23256939-23257599
          Length = 429

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +3

Query: 543 SPRLAPARSPPWGTTSPPRITRRPCPTDSLVA*EVAQCT 659
           SPR + + +PP    SP RI RRP PT  LVA  V+  T
Sbjct: 302 SPRRSSSPAPP---PSPRRILRRPRPTLELVAGAVSITT 337


>02_05_0464 - 29256887-29257765,29258455-29258538
          Length = 320

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -3

Query: 622 VGHGLLVIRGGDVVPQGGLLA---GASRGDHVALPIGA 518
           +G G++ I GG V     L A    A  GDH+ALP GA
Sbjct: 220 MGAGMMGIGGGGVAEYHALSALRFAAGLGDHLALPFGA 257


>01_06_1315 +
           36226262-36226533,36227946-36228060,36228710-36228752,
           36229953-36230329,36230330-36230481,36230591-36230838,
           36230919-36231047,36231130-36231739,36231842-36232086,
           36232195-36232325
          Length = 773

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = +3

Query: 468 ARTDPADVARVESRXSYAPIGRATWSPRLA---PARSPPWGTTSPPRITRRPC 617
           A T P    R  SR ++A  G   W+  +A   PA  PP   +SPP  +  PC
Sbjct: 172 ATTKPVQKLRPGSRTAWA--GHPKWALPVAYEMPAPPPPHAASSPPLPSSSPC 222


>11_04_0383 - 17004520-17005150,17005205-17005327,17005641-17007142
          Length = 751

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 445 PNTITV-GWPGQTRQTLPGLNPXVHMLRSGERRGPLGSRRPEVRPGE 582
           P+T T  GW G++RQT P L P V   R GE    +   R + R GE
Sbjct: 616 PSTATRRGWEGRSRQTRPDL-PHVAQ-REGEGESSVAVYREKRRGGE 660


>03_02_0816 + 11487811-11488708,11488835-11489235
          Length = 432

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 474 TDPADVARVESRXSYAPIGRATWSPRLAPARSPP 575
           T PA VAR+      AP   A  +PR  P R PP
Sbjct: 125 TPPAIVARLMGLEESAPPSPAATTPRPLPTRPPP 158


>01_05_0789 +
           25231013-25231570,25231684-25231761,25232590-25232659,
           25232743-25232812,25233262-25233469,25233546-25233716
          Length = 384

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 175 FKAIPEDYVRKTAQCAQVAIGCSRAAHKLLCEGRRSLPHS*PLSLQRFAR-SWSAALLCA 351
           F+ +P      TA    +A   S +AH ++C    S P +   S  R+ R +WS A    
Sbjct: 10  FQPLPAPIPASTASTTALAARPSSSAHAIICAAAAS-PFTEATSSSRYRRDAWSYAASDG 68

Query: 352 SRSTCTCATA 381
             S+ + A A
Sbjct: 69  DSSSSSAAAA 78


>06_03_0332 + 19652207-19652995
          Length = 262

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 519 APIGRATWSPRLAPARSPPWGTTSPPRITRRPCP 620
           A I  A  SP ++P+ + PW      R++R P P
Sbjct: 215 AAIDAAARSPAMSPSPTRPWTPERVARVSRSPSP 248


>09_04_0152 - 15168285-15168733,15168813-15170712,15171653-15171757
          Length = 817

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 567 FWPARAEGTTSLSRSEHMNXGIQPGQRLPG 478
           F+P R+    +L ++ H++ G  PG RL G
Sbjct: 176 FFPERSGCRVTLYQNSHLSGGFDPGVRLAG 205


>06_03_0315 +
           19486006-19486250,19486346-19487281,19488823-19489019,
           19489044-19489246
          Length = 526

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/61 (22%), Positives = 26/61 (42%)
 Frame = +1

Query: 442 CPNTITVGWPGQTRQTLPGLNPXVHMLRSGERRGPLGSRRPEVRPGELHLPPGLREGRVR 621
           CP  + +G+         G +P + ++  G    PLG   P + PG +      ++G+  
Sbjct: 466 CPQQLCLGFSYGLATLRVGSSPLLMLILEGHASPPLGIGSPLLPPGHVESGRSCKDGKGA 525

Query: 622 Q 624
           Q
Sbjct: 526 Q 526


>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
          Length = 696

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +3

Query: 555 APARSPPWGTTSPPRITRRPCPTDS 629
           APA +PP    +P R+ RRP  T S
Sbjct: 13  APAAAPPSAVRTPRRLRRRPLKTAS 37


>04_04_0864 - 28852252-28854582
          Length = 776

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +3

Query: 159 N*HAAF*GHPRRLREEDGTMCSSGDWMQPRRPQTALRGSTKPSPQLTTLTPKV 317
           N   AF G   +L EE+  + +  D +    P+T L+  T  SP    + P+V
Sbjct: 80  NYETAFHGFAAQLDEEEAELMAEADGVLAVIPETVLQLHTTRSPDFLGIGPEV 132


>02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141
          Length = 352

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 292 CGEGFVDPRRAVCGRRGCIQSPLEHIVPSSSRSLRGWP 179
           C E FVDP    C    C    L+  + S + ++R WP
Sbjct: 268 CREPFVDPVVTKCKHYFCEHCALKVFLASGAYTIRFWP 305


>01_05_0164 + 18827390-18827710
          Length = 106

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 492 ARVESRXSYAPIGRATWSPRLAP--ARSPPWGTTSP 593
           A V +R       R TW P LAP  +R PP  TT P
Sbjct: 33  AAVGARGFQIRWSRTTWRPDLAPTTSRRPPATTTDP 68


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,809,001
Number of Sequences: 37544
Number of extensions: 486278
Number of successful extensions: 1989
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1988
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)