Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0752
         (786 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83122-8|CAF31484.1|  582|Caenorhabditis elegans Hypothetical pr...   102   3e-22
Z83122-7|CAF31483.1|  618|Caenorhabditis elegans Hypothetical pr...   102   3e-22
Z83122-6|CAF31482.1|  587|Caenorhabditis elegans Hypothetical pr...   102   3e-22
Z83122-5|CAB05600.1|  654|Caenorhabditis elegans Hypothetical pr...   102   3e-22
AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical ...    92   4e-19
AF040660-6|AAN65286.1|  541|Caenorhabditis elegans Hypothetical ...    92   4e-19
AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical ...    92   4e-19
AF125442-11|AAD12791.1|  624|Caenorhabditis elegans Hypothetical...    57   2e-08
AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical ...    29   5.0  
AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical...    29   5.0  
U41532-5|AAF99906.2|  111|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z83122-8|CAF31484.1|  582|Caenorhabditis elegans Hypothetical
           protein R11A5.4b protein.
          Length = 582

 Score =  102 bits (245), Expect = 3e-22
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = +2

Query: 536 DVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVE 715
           D V   + G +  +G++++P D    +  RFPGCM GR MYVIPFSMGPVG PLSKIG++
Sbjct: 131 DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 190

Query: 716 ITDSPYVVFSMRVMTRL 766
           +TDS YVV SMR+MTR+
Sbjct: 191 LTDSNYVVLSMRIMTRV 207



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +3

Query: 303 LTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDP 482
           L  KV+ F+   A L +P  + +CDGS+ EA              +L  Y+N ++ RTDP
Sbjct: 53  LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 112

Query: 483 ADVARVESR 509
            DVARVES+
Sbjct: 113 KDVARVESK 121


>Z83122-7|CAF31483.1|  618|Caenorhabditis elegans Hypothetical
           protein R11A5.4d protein.
          Length = 618

 Score =  102 bits (245), Expect = 3e-22
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = +2

Query: 536 DVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVE 715
           D V   + G +  +G++++P D    +  RFPGCM GR MYVIPFSMGPVG PLSKIG++
Sbjct: 95  DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 154

Query: 716 ITDSPYVVFSMRVMTRL 766
           +TDS YVV SMR+MTR+
Sbjct: 155 LTDSNYVVLSMRIMTRV 171



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +3

Query: 303 LTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDP 482
           L  KV+ F+   A L +P  + +CDGS+ EA              +L  Y+N ++ RTDP
Sbjct: 17  LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 76

Query: 483 ADVARVESR 509
            DVARVES+
Sbjct: 77  KDVARVESK 85


>Z83122-6|CAF31482.1|  587|Caenorhabditis elegans Hypothetical
           protein R11A5.4c protein.
          Length = 587

 Score =  102 bits (245), Expect = 3e-22
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = +2

Query: 536 DVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVE 715
           D V   + G +  +G++++P D    +  RFPGCM GR MYVIPFSMGPVG PLSKIG++
Sbjct: 64  DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 123

Query: 716 ITDSPYVVFSMRVMTRL 766
           +TDS YVV SMR+MTR+
Sbjct: 124 LTDSNYVVLSMRIMTRV 140



 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 21/53 (39%), Positives = 30/53 (56%)
 Frame = +3

Query: 351 QPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDPADVARVESR 509
           +P  + +CDGS+ EA              +L  Y+N ++ RTDP DVARVES+
Sbjct: 2   RPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDPKDVARVESK 54


>Z83122-5|CAB05600.1|  654|Caenorhabditis elegans Hypothetical
           protein R11A5.4a protein.
          Length = 654

 Score =  102 bits (245), Expect = 3e-22
 Identities = 44/77 (57%), Positives = 57/77 (74%)
 Frame = +2

Query: 536 DVVPSARAGQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVE 715
           D V   + G +  +G++++P D    +  RFPGCM GR MYVIPFSMGPVG PLSKIG++
Sbjct: 131 DTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKIGIQ 190

Query: 716 ITDSPYVVFSMRVMTRL 766
           +TDS YVV SMR+MTR+
Sbjct: 191 LTDSNYVVLSMRIMTRV 207



 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/69 (39%), Positives = 38/69 (55%)
 Frame = +3

Query: 303 LTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTDP 482
           L  KV+ F+   A L +P  + +CDGS+ EA              +L  Y+N ++ RTDP
Sbjct: 53  LPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYICRTDP 112

Query: 483 ADVARVESR 509
            DVARVES+
Sbjct: 113 KDVARVESK 121


>AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical
           protein W05G11.6d protein.
          Length = 594

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +2

Query: 560 GQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVV 739
           G +  +G ++S   +   +  RFPGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV
Sbjct: 126 GVRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVV 185

Query: 740 FSMRVMTRL 766
             MR MTR+
Sbjct: 186 LCMRTMTRM 194



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/70 (41%), Positives = 39/70 (55%)
 Frame = +3

Query: 300 TLTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTD 479
           +L+PKV+ FV   A L  P  +++CDGS+ E                L  Y+N +L RTD
Sbjct: 39  SLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRTD 98

Query: 480 PADVARVESR 509
           P DVARVES+
Sbjct: 99  PRDVARVESK 108


>AF040660-6|AAN65286.1|  541|Caenorhabditis elegans Hypothetical
           protein W05G11.6b protein.
          Length = 541

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +2

Query: 560 GQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVV 739
           G +  +G ++S   +   +  RFPGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV
Sbjct: 16  GVRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVV 75

Query: 740 FSMRVMTRL 766
             MR MTR+
Sbjct: 76  LCMRTMTRM 84


>AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical
           protein W05G11.6a protein.
          Length = 651

 Score = 92.3 bits (219), Expect = 4e-19
 Identities = 38/69 (55%), Positives = 50/69 (72%)
 Frame = +2

Query: 560 GQKSALGNYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVV 739
           G +  +G ++S   +   +  RFPGCM GR MYV+P+SMGP+G PLSK G+E+TDSPYVV
Sbjct: 126 GVRPIMGQWMSEEQFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVV 185

Query: 740 FSMRVMTRL 766
             MR MTR+
Sbjct: 186 LCMRTMTRM 194



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 29/70 (41%), Positives = 39/70 (55%)
 Frame = +3

Query: 300 TLTPKVRAFVERSAALCQPEHVHVCDGSETEARAXXXXXXXXXXXKRLPKYDNCWLARTD 479
           +L+PKV+ FV   A L  P  +++CDGS+ E                L  Y+N +L RTD
Sbjct: 39  SLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLVERGVLTPLKAYENNYLCRTD 98

Query: 480 PADVARVESR 509
           P DVARVES+
Sbjct: 99  PRDVARVESK 108


>AF125442-11|AAD12791.1|  624|Caenorhabditis elegans Hypothetical
           protein H04M03.1 protein.
          Length = 624

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = +2

Query: 581 NYISPPDYEKAVSDRFPGCMRGRTMYVIPFSMGPVGSPLSKIGVEITDSPYVVFSMRVMT 760
           +Y+S   ++   +  F   M GRTMYV+PFSMG +GS  + +GV+ITD P +V ++R   
Sbjct: 158 HYMSQKMFDFNKTKLFDCSMSGRTMYVVPFSMGTIGSRRAVVGVQITDDPVLVLNLRTTF 217

Query: 761 RL 766
           R+
Sbjct: 218 RV 219



 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 294 LTTLTPKVRAFVERSAALCQPEHVHVCDGSETEAR 398
           LT L+P+V  F+     L  P  V +C+GS  EA+
Sbjct: 50  LTWLSPEVLTFLNDCVQLMTPCAVRICNGSVFEAQ 84


>AL117205-8|CAB55167.1|  444|Caenorhabditis elegans Hypothetical
           protein Y116A8A.9 protein.
          Length = 444

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 292 CGEGFVDPRRAVCGRRGCIQSPLEHIV 212
           C +G VDP   +C  +GC  +  EH +
Sbjct: 402 CDKGIVDPYPPLCDVKGCYTAQWEHTI 428


>AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical
           protein F07B7.14 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = +2

Query: 596 PDYEKAVSDRFPGCMRGRTMYVIPFSMGPVG 688
           P  EK +S R   C R RT   +P S+GP G
Sbjct: 94  PPKEK-ISTRLASCRRPRTSSSLPLSLGPSG 123


>U41532-5|AAF99906.2|  111|Caenorhabditis elegans Hypothetical
           protein F11D5.6 protein.
          Length = 111

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 528 GRATWSPRLAPARSPPWGTTSPPRITRRPCPTDSL 632
           GR + +P   PA  PP    S P   +R C  D+L
Sbjct: 73  GRLSKTPSSTPAPPPPQPVVSTPAKAKRQCKFDNL 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,379,028
Number of Sequences: 27780
Number of extensions: 364035
Number of successful extensions: 1251
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)