Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0752
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.4  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.4  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    21   9.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 687 DLLSRRLV*KSRIRLTWFFLCES*LDWSEGSRY 785
           D LSR L    R  L+W    +  LD  EG RY
Sbjct: 680 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRY 712


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +3

Query: 687 DLLSRRLV*KSRIRLTWFFLCES*LDWSEGSRY 785
           D LSR L    R  L+W    +  LD  EG RY
Sbjct: 718 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRY 750


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 412 SCSRALASVSEPSHTCTCSGWHRAA 338
           +CS  +AS++E  H    SG H ++
Sbjct: 499 TCSGEVASLTEYHHVAPPSGHHASS 523


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 301 VVSCGEGFVD 272
           +V+CG GF+D
Sbjct: 208 IVACGAGFID 217


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,636
Number of Sequences: 438
Number of extensions: 4507
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)