Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0751
(807 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 109 5e-25
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 99 6e-22
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 89 9e-19
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 87 4e-18
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 78 1e-15
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 71 1e-13
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 71 2e-13
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 70 3e-13
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 32 0.083
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 31 0.19
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 29 0.78
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 28 1.4
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.8
SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer... 27 2.4
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 26 5.5
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.6
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 109 bits (262), Expect = 5e-25
Identities = 50/84 (59%), Positives = 69/84 (82%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATILK +SV+HPAAKMLV+LS AQD+EAGDGTTSVV++AG++L AEKLL+KGIHPTVI+
Sbjct: 62 ATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIA 121
Query: 436 DGFQKALQLALQVVENMSTPVDLN 507
+ FQ+A + ++ + ++L+
Sbjct: 122 ESFQRAAGFTVDCMKENALAIELS 145
Score = 89.4 bits (212), Expect = 5e-19
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Frame = +3
Query: 462 GFTGGRKYVNSSGLEYED--ALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSG 635
GFT N+ +E D +LL+AA TSLNSK+VSQ+S +LAPIAV A+ V++P
Sbjct: 129 GFTVDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDP---R 185
Query: 636 VGARVDLRDVKVIERIGGTVEDAELIQGLVIPHRAA-NVNGPHPLKRLKLVLYNF 797
V VDL+D+++++++GG ++D ELI GL + A + GP +++ + L F
Sbjct: 186 VATNVDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQF 240
Score = 78.2 bits (184), Expect = 1e-15
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +2
Query: 104 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
++D+ KP ++RLSNI AA++VADAIRTSLGP+GMDKMIQ GEV +TND
Sbjct: 11 FQDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTND 60
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 99.1 bits (236), Expect = 6e-22
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATIL QM V H AK+LV+LS++QD E GDGTT VVV+AGALL+ AE L+ KGIHP I+
Sbjct: 77 ATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIA 136
Query: 436 DGFQKALQLALQVVENMSTPVDLN 507
DG++KA Q+A++ ++ +S VD +
Sbjct: 137 DGYEKACQVAVKHLDAISDVVDFS 160
Score = 52.8 bits (121), Expect = 6e-08
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = +2
Query: 140 SNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
S+I A K VA+ +RTSLGPRG+DK++ + +GE+T+TND
Sbjct: 38 SHILATKTVANIVRTSLGPRGLDKILISPDGEITVTND 75
Score = 52.4 bits (120), Expect = 7e-08
Identities = 31/95 (32%), Positives = 53/95 (55%)
Frame = +3
Query: 519 LLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGTVE 698
L ++A TSL SKVVS+ A IAV A+ +V + V D +KV ++GG+V+
Sbjct: 167 LFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDV----DFELIKVDGKVGGSVD 222
Query: 699 DAELIQGLVIPHRAANVNGPHPLKRLKLVLYNFAF 803
D +L++G+V+ ++ PH ++ K+ + F
Sbjct: 223 DTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPF 257
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 88.6 bits (210), Expect = 9e-19
Identities = 38/82 (46%), Positives = 62/82 (75%)
Frame = +1
Query: 262 ILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDG 441
IL+++ V HPAAK ++EL+R QD E GDGTTSV+++AG +L +A LL + IHP V+
Sbjct: 64 ILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRS 123
Query: 442 FQKALQLALQVVENMSTPVDLN 507
F++AL+ AL +++ ++ PV+++
Sbjct: 124 FKQALEDALSIIDEITLPVNVD 145
Score = 50.8 bits (116), Expect = 2e-07
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +2
Query: 134 RLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
++SNI AAKAVAD IRT LGPR M KM+ G V +TND
Sbjct: 21 QMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 86.6 bits (205), Expect = 4e-18
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATI+K + ++HPAAK LV+++RAQD E GDGTTSVVV AG LL A ++ G+ +I
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 436 DGFQKALQLALQVVENMSTPVDLN 507
G++KA QLA+ ++ ++ +DL+
Sbjct: 127 RGYRKAAQLAVNKIKEIAIHLDLS 150
Score = 50.4 bits (115), Expect = 3e-07
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +2
Query: 110 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
D S+ LSNINA AV D IRT+LGP G DK++ GEV I+ND
Sbjct: 18 DDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISND 65
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 78.2 bits (184), Expect = 1e-15
Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATIL + V HPA K+LVEL++ QD E GDGTTSVV+IA LL A +L++ IHPT I
Sbjct: 64 ATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTII 123
Query: 436 DGFQKALQLALQ-VVENMSTPVD 501
G++ A++ A++ + + +S VD
Sbjct: 124 TGYRLAIREAVKFMTDVLSCSVD 146
Score = 49.2 bits (112), Expect = 7e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +2
Query: 110 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
+K D+R N+ A A+A+ +++SLGP G+DKM+ G+VT+TND
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTND 62
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 71.3 bits (167), Expect = 1e-13
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATILK +++ + AAK+LV +S+ QD E GDGTTSV V A LL AE ++ IHP VI
Sbjct: 64 ATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVII 123
Query: 436 DGFQKALQLALQVVENMS 489
DG++ A + A+ + S
Sbjct: 124 DGYRIATKTAIDALRASS 141
Score = 46.0 bits (104), Expect = 6e-06
Identities = 19/41 (46%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Frame = +2
Query: 134 RLSNINAAKAVADAIRTSLGPRGMDKMIQA-ANGEVTITND 253
RLS+ A AV D ++++LGP+GMDK++Q+ ++G++ +TND
Sbjct: 22 RLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 70.9 bits (166), Expect = 2e-13
Identities = 32/86 (37%), Positives = 55/86 (63%)
Frame = +1
Query: 262 ILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDG 441
+L +M + +P A + + + AQD GDGTTSV ++ G LL AE +++G+HP++ISDG
Sbjct: 61 LLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDG 120
Query: 442 FQKALQLALQVVENMSTPVDLNMKML 519
F A AL +++ T +++ ++L
Sbjct: 121 FNLAKNEALTFLDSFKTDFEVDREVL 146
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/94 (29%), Positives = 50/94 (53%)
Frame = +3
Query: 513 DALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEPIVSGVGARVDLRDVKVIERIGGT 692
+ LL A TSL++K+ S+ LAP V AI + P +DL V++++ +
Sbjct: 144 EVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRP-----DEPIDLHMVEIMKMQNRS 198
Query: 693 VEDAELIQGLVIPHRAANVNGPHPLKRLKLVLYN 794
D +LI+GL++ H A + + P +K +++ N
Sbjct: 199 ASDTQLIRGLLLDHGARHPDMPKQVKNAYILILN 232
Score = 33.9 bits (74), Expect = 0.027
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 143 NINAAKAVADAIRTSLGPRGMDKMIQAANGEVTITND 253
NI+AA + D ++++LGP G KM+ G + +T D
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKD 57
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 70.1 bits (164), Expect = 3e-13
Identities = 31/77 (40%), Positives = 52/77 (67%)
Frame = +1
Query: 256 ATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVIS 435
ATI++++ VIHPAAK++V+ ++ Q+ E GD VVV G LL AE +++ G+ P I+
Sbjct: 69 ATIIRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIA 128
Query: 436 DGFQKALQLALQVVENM 486
G++ AL ++V+E +
Sbjct: 129 KGYEMALSHTMEVLEEI 145
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 53 IMAPKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMDKMIQAANG 232
+ PKA G + Y+ D + N NA + +++ RTSLGP G +K++
Sbjct: 3 LRVPKASGPQLFREG--YRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQ 60
Query: 233 EVTITND 253
+ +TND
Sbjct: 61 QTFLTND 67
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 32.3 bits (70), Expect = 0.083
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 639 GARVDLRDVKVIERI-GGTVEDAELIQGLVIPHRAANVNGPHPLKRLKLVLYNFA 800
G +D+R I++I GG+++D L+ G++ +A++ + L+R ++ L F+
Sbjct: 516 GDDIDVRSYVKIKKIPGGSIQDCFLVNGVLFSKKASSKSMDRSLRRPRIALLTFS 570
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 31.1 bits (67), Expect = 0.19
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +1
Query: 295 AKMLVELSRAQDIEAGDGTTSVVVIAGALLDSAEKLLQKGIHPTVISDGFQKALQLALQV 474
A+++ +++ + AGDGTT+ V+ A+ + + G +P + G Q A+ ++
Sbjct: 102 ARLVQDVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEF 161
Query: 475 VE 480
++
Sbjct: 162 LQ 163
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.78
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 533 CNITKFQSSFTTLNYFGTHCSASNSS 610
CNI KF SSF T N F T SS
Sbjct: 276 CNIPKFNSSFKTSNDFFTFTKTEESS 301
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = -3
Query: 748 TLAARCGMTNPWISSASSTVPPIRSMTFTSLRSTLAPTPLTIGSITA 608
TLA G +I+++S+ V IRS+ + +T P + +G++TA
Sbjct: 374 TLAKSYGCVGGYIAASSTLVDMIRSLAPGFIFTTSLPPHVMVGALTA 420
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.9 bits (59), Expect = 1.8
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -3
Query: 709 SSASSTVPPIRSMTFTSLRSTLAPTPLTIGSITARIACTA 590
S++SST P S T +S S+ + TP++ SIT+ I+ +A
Sbjct: 141 STSSSTATPSSSSTTSSSSSSSSSTPIS-SSITSSISSSA 179
>SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase
Mam4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 276 ECYSSSCKNVGRIISCSRY*SW*WNNISSCYCWCVVGF 389
EC S K+ ++I+C R+ S+ N I S Y +GF
Sbjct: 87 ECLLSGGKSFAKVINCLRFPSFLINFIFSVYQTSALGF 124
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = -2
Query: 635 TTNNRFHYCSNC--LHCNGCQNS*VL*NYFGI 546
T NR H+C NC + CN C + + + GI
Sbjct: 184 TFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGI 215
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 396 LSRIQQRTSNNNY*CCSITSFNI 328
LS Q TS NN+ C SI +F I
Sbjct: 177 LSNRQLNTSENNWTCLSIENFGI 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,230,770
Number of Sequences: 5004
Number of extensions: 63794
Number of successful extensions: 218
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 392429240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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