Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0750
(642 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 147 2e-34
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 139 5e-32
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 134 2e-30
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 113 5e-24
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 107 2e-22
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 107 2e-22
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 107 3e-22
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 101 1e-20
UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genom... 89 8e-17
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 86 8e-16
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 79 7e-14
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 79 7e-14
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 79 9e-14
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 79 1e-13
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 78 2e-13
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 77 5e-13
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 76 6e-13
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 76 6e-13
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 76 8e-13
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 74 3e-12
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 74 3e-12
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 73 6e-12
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 73 8e-12
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 72 1e-11
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 72 1e-11
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 72 1e-11
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 71 2e-11
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 70 4e-11
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 69 7e-11
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 69 7e-11
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 69 1e-10
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 69 1e-10
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 68 2e-10
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 68 2e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 68 2e-10
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 68 2e-10
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 68 2e-10
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 67 3e-10
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 67 4e-10
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 67 4e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 67 4e-10
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 67 4e-10
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 66 5e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 66 5e-10
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 7e-10
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 9e-10
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 65 1e-09
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 65 2e-09
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 65 2e-09
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 64 2e-09
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 2e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 64 3e-09
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 64 3e-09
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 64 3e-09
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 64 3e-09
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 64 4e-09
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 64 4e-09
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 64 4e-09
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 64 4e-09
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 64 4e-09
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 63 5e-09
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 63 5e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 63 6e-09
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 63 6e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 8e-09
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 62 8e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 62 8e-09
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 62 8e-09
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 62 8e-09
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 62 8e-09
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 62 1e-08
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 62 1e-08
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 62 1e-08
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 62 1e-08
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 62 1e-08
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 62 1e-08
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 1e-08
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 1e-08
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 62 1e-08
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 62 1e-08
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 61 2e-08
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 61 2e-08
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 61 2e-08
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 61 2e-08
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 61 2e-08
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 61 2e-08
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 61 2e-08
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 61 2e-08
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 61 2e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 61 3e-08
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 3e-08
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 61 3e-08
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 61 3e-08
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 61 3e-08
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 60 3e-08
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 60 3e-08
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 60 3e-08
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 60 3e-08
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 60 3e-08
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 60 4e-08
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 60 6e-08
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 60 6e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 60 6e-08
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 60 6e-08
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 60 6e-08
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 59 8e-08
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 59 8e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 59 8e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 59 8e-08
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 59 8e-08
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 59 8e-08
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 59 8e-08
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 59 1e-07
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 59 1e-07
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 59 1e-07
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 59 1e-07
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 58 1e-07
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 58 1e-07
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 58 1e-07
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 58 1e-07
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 58 2e-07
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 58 2e-07
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 58 2e-07
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 58 2e-07
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 58 2e-07
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 58 2e-07
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 58 2e-07
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 2e-07
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 58 2e-07
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 58 2e-07
UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2; S... 58 2e-07
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 57 3e-07
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 57 3e-07
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 57 3e-07
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 57 3e-07
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 57 3e-07
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 57 4e-07
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 57 4e-07
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 57 4e-07
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 57 4e-07
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 57 4e-07
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 57 4e-07
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 57 4e-07
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 57 4e-07
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 57 4e-07
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 57 4e-07
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 57 4e-07
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 56 5e-07
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 56 5e-07
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 56 5e-07
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 56 5e-07
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 56 5e-07
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 56 5e-07
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 56 5e-07
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 56 5e-07
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 56 5e-07
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 56 7e-07
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 56 7e-07
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 56 7e-07
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 56 7e-07
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 56 7e-07
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 56 7e-07
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 56 7e-07
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 56 7e-07
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 56 7e-07
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 56 7e-07
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 56 7e-07
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 56 1e-06
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 56 1e-06
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 56 1e-06
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 56 1e-06
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 56 1e-06
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 56 1e-06
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 56 1e-06
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 55 1e-06
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 55 1e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 55 1e-06
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 55 1e-06
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 55 1e-06
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 55 1e-06
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 55 2e-06
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 55 2e-06
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 55 2e-06
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 55 2e-06
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 55 2e-06
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 55 2e-06
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 55 2e-06
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 55 2e-06
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 55 2e-06
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 55 2e-06
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 55 2e-06
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 54 2e-06
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 54 2e-06
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 54 2e-06
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 54 2e-06
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 54 2e-06
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 54 2e-06
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 54 3e-06
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 54 3e-06
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 54 3e-06
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 54 3e-06
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 54 3e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 54 3e-06
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 54 3e-06
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 54 3e-06
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 54 4e-06
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 54 4e-06
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 54 4e-06
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 54 4e-06
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 4e-06
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 54 4e-06
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 54 4e-06
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 54 4e-06
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 54 4e-06
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 53 5e-06
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 53 5e-06
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 53 5e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 53 5e-06
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 53 5e-06
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 53 5e-06
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 53 5e-06
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 53 5e-06
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 53 5e-06
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 53 5e-06
UniRef50_Q5KC99 Cluster: ATP-dependent RNA helicase MAK5; n=2; F... 53 5e-06
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 53 5e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 53 7e-06
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 53 7e-06
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 53 7e-06
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 53 7e-06
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 53 7e-06
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 53 7e-06
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 53 7e-06
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 53 7e-06
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 53 7e-06
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 53 7e-06
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 53 7e-06
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 53 7e-06
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 53 7e-06
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 53 7e-06
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 53 7e-06
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 53 7e-06
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 53 7e-06
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 53 7e-06
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 52 9e-06
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 52 9e-06
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 52 9e-06
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 52 9e-06
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 52 9e-06
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 52 9e-06
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 52 9e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 52 9e-06
UniRef50_Q4P1Z0 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 52 1e-05
UniRef50_UPI00015B4CF1 Cluster: PREDICTED: similar to DEAD box A... 52 1e-05
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 52 1e-05
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 52 1e-05
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 52 1e-05
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 52 1e-05
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 52 1e-05
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 52 1e-05
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 52 1e-05
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 52 1e-05
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 52 2e-05
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 52 2e-05
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 52 2e-05
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 52 2e-05
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 52 2e-05
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 52 2e-05
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 52 2e-05
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 52 2e-05
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 52 2e-05
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 52 2e-05
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 52 2e-05
UniRef50_Q869P0 Cluster: Similar to Homo sapiens (Human). DEAD/D... 52 2e-05
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 52 2e-05
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 52 2e-05
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 52 2e-05
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 52 2e-05
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 52 2e-05
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 51 2e-05
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 51 2e-05
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 51 2e-05
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 51 2e-05
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 51 2e-05
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 51 2e-05
UniRef50_Q54TD7 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 51 2e-05
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 51 2e-05
UniRef50_Q0U6X2 Cluster: ATP-dependent RNA helicase MAK5; n=2; P... 51 2e-05
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 51 3e-05
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 51 3e-05
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 51 3e-05
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 51 3e-05
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 51 3e-05
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 51 3e-05
UniRef50_A0E4U1 Cluster: Chromosome undetermined scaffold_79, wh... 51 3e-05
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 51 3e-05
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 51 3e-05
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 51 3e-05
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 51 3e-05
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 50 4e-05
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 50 4e-05
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 4e-05
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 50 4e-05
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 50 4e-05
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 50 4e-05
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 50 4e-05
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 50 4e-05
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 50 4e-05
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 50 4e-05
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 50 4e-05
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 50 4e-05
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 50 4e-05
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 50 5e-05
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 50 5e-05
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 50 5e-05
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 50 5e-05
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 50 5e-05
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 50 5e-05
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 50 5e-05
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 50 5e-05
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 50 5e-05
UniRef50_A3H9E9 Cluster: DEAD/DEAH box helicase-like; n=1; Caldi... 50 5e-05
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 50 5e-05
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 50 6e-05
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 50 6e-05
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 50 6e-05
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 50 6e-05
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 50 6e-05
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 50 6e-05
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 50 6e-05
UniRef50_Q00X54 Cluster: RNA Helicase; n=2; Ostreococcus|Rep: RN... 50 6e-05
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 50 6e-05
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 50 6e-05
UniRef50_A7RKF5 Cluster: Predicted protein; n=1; Nematostella ve... 50 6e-05
UniRef50_A5K9E1 Cluster: DEAD-box subfamily ATP-dependant helica... 50 6e-05
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 50 6e-05
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 50 6e-05
UniRef50_Q8GUG7 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 50 6e-05
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 50 6e-05
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 50 6e-05
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 50 6e-05
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 50 6e-05
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 50 6e-05
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 49 8e-05
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 49 8e-05
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 49 8e-05
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 49 8e-05
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 49 8e-05
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 49 8e-05
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 49 8e-05
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 49 8e-05
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 49 8e-05
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 49 8e-05
UniRef50_Q1E7Y4 Cluster: ATP-dependent RNA helicase MAK5; n=11; ... 49 8e-05
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 49 1e-04
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 49 1e-04
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 49 1e-04
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 49 1e-04
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 49 1e-04
UniRef50_A7TSU7 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q0DVX2 Cluster: DEAD-box ATP-dependent RNA helicase 50;... 49 1e-04
UniRef50_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47;... 49 1e-04
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 49 1e-04
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 49 1e-04
UniRef50_Q93Y39 Cluster: DEAD-box ATP-dependent RNA helicase 13;... 49 1e-04
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 49 1e-04
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 49 1e-04
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 48 1e-04
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 48 1e-04
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 48 1e-04
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 48 1e-04
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 48 1e-04
UniRef50_A7AN17 Cluster: DEAD/DEAH box helicase domain containin... 48 1e-04
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 48 1e-04
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 48 1e-04
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 48 1e-04
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 48 1e-04
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 48 2e-04
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 48 2e-04
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 48 2e-04
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 48 2e-04
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 48 2e-04
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 48 2e-04
UniRef50_A7U5W9 Cluster: DEAD-box helicase 7; n=5; Plasmodium|Re... 48 2e-04
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 48 2e-04
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 48 2e-04
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 48 2e-04
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 48 3e-04
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 48 3e-04
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 48 3e-04
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 48 3e-04
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 48 3e-04
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 48 3e-04
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 48 3e-04
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 48 3e-04
UniRef50_Q5C2I6 Cluster: SJCHGC04550 protein; n=1; Schistosoma j... 48 3e-04
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 48 3e-04
UniRef50_A5K8S1 Cluster: DEAD/DEAH box helicase, putative; n=1; ... 48 3e-04
UniRef50_Q5KLJ5 Cluster: Translation initiation factor, putative... 48 3e-04
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 48 3e-04
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 48 3e-04
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 47 3e-04
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 47 3e-04
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 47 3e-04
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 47 3e-04
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 47 3e-04
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 47 3e-04
UniRef50_UPI0000E49031 Cluster: PREDICTED: similar to DEAD/DEXH ... 47 4e-04
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 47 4e-04
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 47 4e-04
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 47 4e-04
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 47 4e-04
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 47 4e-04
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 47 4e-04
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 47 4e-04
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 47 4e-04
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 47 4e-04
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 46 6e-04
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 46 6e-04
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 46 6e-04
UniRef50_Q7R850 Cluster: ATP-dependent RNA helicase; n=1; Plasmo... 46 6e-04
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 46 6e-04
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 46 6e-04
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 46 6e-04
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 46 6e-04
UniRef50_Q5UQD1 Cluster: Putative ATP-dependent RNA helicase R45... 46 6e-04
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 46 6e-04
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 46 6e-04
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 46 6e-04
UniRef50_Q7RZH4 Cluster: ATP-dependent RNA helicase mak-5; n=1; ... 46 6e-04
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 46 6e-04
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 46 6e-04
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 46 6e-04
UniRef50_Q502G7 Cluster: LOC553462 protein; n=3; Danio rerio|Rep... 46 8e-04
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 46 8e-04
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 46 8e-04
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 46 8e-04
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 46 8e-04
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 46 8e-04
UniRef50_Q5CL10 Cluster: DEAD/H (Asp-Glu-Ala-Asp/His) box polype... 46 8e-04
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 46 8e-04
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 46 8e-04
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 46 8e-04
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 46 8e-04
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 46 8e-04
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 46 8e-04
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 46 8e-04
UniRef50_Q6FU81 Cluster: ATP-dependent RNA helicase MSS116, mito... 46 8e-04
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 46 8e-04
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 46 8e-04
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 46 0.001
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 147 bits (357), Expect = 2e-34
Identities = 68/85 (80%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 GMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQ 430
GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYGFEKPSAIQQRAI+PCI+G DVIAQ
Sbjct: 14 GMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQ 73
Query: 431 AQSGTGKTATFSISILQQIDTSIRE 505
AQSGTGKTATF ISILQ+IDTS++E
Sbjct: 74 AQSGTGKTATFVISILQRIDTSLKE 98
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 139 bits (337), Expect = 5e-32
Identities = 63/85 (74%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 GMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQ 430
GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+PCI+G DVIAQ
Sbjct: 17 GMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQ 76
Query: 431 AQSGTGKTATFSISILQQIDTSIRE 505
AQSGTGKTATF+ISILQQ++ +E
Sbjct: 77 AQSGTGKTATFAISILQQLEIEFKE 101
Score = 76.6 bits (180), Expect = 5e-13
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL+LAPTRELAQQIQKV++ALGD++ A CHACIGGTNVR ++++
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQK 147
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 134 bits (323), Expect = 2e-30
Identities = 61/85 (71%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 GMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQ 430
GM+P G ++++W ++ + FDDMNLKE LLRGIYAYGFEKPSAIQQRAI+PCI+G DVIAQ
Sbjct: 19 GMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQ 78
Query: 431 AQSGTGKTATFSISILQQIDTSIRE 505
AQSGTGKTATF+ISILQQ++ +E
Sbjct: 79 AQSGTGKTATFAISILQQLEIDQKE 103
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 113 bits (271), Expect = 5e-24
Identities = 54/71 (76%), Positives = 61/71 (85%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFSIS
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSIS 95
Query: 473 ILQQIDTSIRE 505
+LQ +D +RE
Sbjct: 96 VLQCLDIQVRE 106
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/44 (77%), Positives = 40/44 (90%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALILAPTRELA QIQK ++ALGD++N +CHACIGGTNV EDIR+
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRK 152
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 107 bits (258), Expect = 2e-22
Identities = 51/66 (77%), Positives = 58/66 (87%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
V TFD M L+E+LLRGIYAYGFEKPSAIQQRAI I+GRDVIAQ+QSGTGKTATFS+S
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVS 95
Query: 473 ILQQID 490
+LQ +D
Sbjct: 96 VLQCLD 101
Score = 50.0 bits (114), Expect = 5e-05
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = +1
Query: 562 VIALGDHLNAKCHACIGGTNVREDIRQ 642
++ALGD++N +CHACIGGTNV EDIR+
Sbjct: 105 LLALGDYMNVQCHACIGGTNVGEDIRK 131
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 107 bits (258), Expect = 2e-22
Identities = 47/76 (61%), Positives = 63/76 (82%)
Frame = +2
Query: 278 TDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 457
T+ +++ +FD M +K +LLRGIYAY FEKPSA+QQRA++P IQG DVIAQAQSGTGKT+
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGKTS 328
Query: 458 TFSISILQQIDTSIRE 505
F++++ Q +DTS RE
Sbjct: 329 MFALTVYQMVDTSNRE 344
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCH 600
ALI +PTRELA Q +KV++A+GD +N + H
Sbjct: 347 ALISSPTRELASQTEKVILAIGDSVNIQAH 376
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 107 bits (256), Expect = 3e-22
Identities = 48/81 (59%), Positives = 66/81 (81%)
Frame = +2
Query: 272 LDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 451
L +W + VETF+D+ L ++LLRGI++YGFE+PSAIQQ+AI P I G+DV+AQAQSGTGK
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGK 106
Query: 452 TATFSISILQQIDTSIRECKL 514
T TF+I LQ+ID + R+ ++
Sbjct: 107 TGTFTIGALQRIDPNQRKTQV 127
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
+ILAP RELA+QI VV +G +LN + CIGGT+ +E
Sbjct: 128 IILAPVRELAKQIYDVVKGIGQYLNIEAFCCIGGTSTQE 166
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 101 bits (242), Expect = 1e-20
Identities = 47/65 (72%), Positives = 58/65 (89%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
V++F+ M L E LLRGI+AYGFEKPSAIQQ+AI+PCI+G DVIAQ+QSGTGKTAT+ I+
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAA 79
Query: 476 LQQID 490
LQ+ID
Sbjct: 80 LQRID 84
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIA 570
A+ILAPTRELA QIQKVV++
Sbjct: 92 AIILAPTRELANQIQKVVLS 111
>UniRef50_A7P4J7 Cluster: Chromosome chr4 scaffold_6, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr4 scaffold_6, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 89.0 bits (211), Expect = 8e-17
Identities = 43/58 (74%), Positives = 47/58 (81%)
Frame = +2
Query: 314 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 487
M LKE LLRGIYAYG EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ+
Sbjct: 1 MGLKENLLRGIYAYGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 58
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D+ ++ +T++D LKE+LL+GIY+ GFE PS IQ+ AI P I GRD+ AQAQSGTGKT
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKAAIQPIIDGRDIRAQAQSGTGKT 89
Query: 455 ATFSISILQQIDTS 496
F+++ LQ D S
Sbjct: 90 GAFAVAALQICDMS 103
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 79.4 bits (187), Expect = 7e-14
Identities = 39/74 (52%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 469
V TF ++NLKE LL+GI A GF KPS IQ+RA+ I +++IAQ+QSGTGKTATF +
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQERALSSLISDNPQNMIAQSQSGTGKTATFLL 134
Query: 470 SILQQIDTSIRECK 511
++L +I T + C+
Sbjct: 135 AMLSRIRTDVHYCQ 148
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/74 (47%), Positives = 52/74 (70%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
+ TF+ M L++ELLRGI A+GF +P +QQRA++P IQGRDV+ Q TGKT S+S
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQQRALVPLIQGRDVVIQNFRSTGKTTVMSLS 79
Query: 473 ILQQIDTSIRECKL 514
+L D S+++ ++
Sbjct: 80 VLSIFDLSVKKIQV 93
Score = 39.9 bits (89), Expect = 0.051
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
LIL TR+L ++ +++ALG LN HAC G ++++DI
Sbjct: 94 LILQKTRKLTEENAGLIMALGKFLNVSIHACSEGNSIQDDI 134
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 79.0 bits (186), Expect = 9e-14
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +2
Query: 338 RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 496
+ + +YGFEKPS IQQ I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS
Sbjct: 47 QNVLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTS 99
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/65 (53%), Positives = 50/65 (76%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D L+ ELL GIY GFE+PS IQ++AI + GRD++A+A++GTGKTA+F I L +
Sbjct: 38 FEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNR 97
Query: 485 IDTSI 499
I+TS+
Sbjct: 98 INTSL 102
Score = 40.7 bits (91), Expect = 0.029
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDI 636
ALIL PTRELA Q +V LG H+ N + GGT +R+DI
Sbjct: 107 ALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLRDDI 149
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 78.2 bits (184), Expect = 2e-13
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
VE+F D+ L+EELL+ I GF +PS IQ AI ++GRDVI QAQ+GTGKTA F + +
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPL 63
Query: 476 LQQIDTSIR 502
LQ+ID + R
Sbjct: 64 LQRIDAADR 72
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI--QGRDVIAQAQSGTGKTATFSI 469
V++F+D+ LK ELL GI + GF KPS+IQ+RA+ + Q +++IAQ+QSGTGKTATF +
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLL 106
Query: 470 SILQQIDTSIRECKL*SWLPQESWPNK 550
++L +ID + C+ P N+
Sbjct: 107 TMLSKIDVNDPFCQCLCMAPTRELVNQ 133
>UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyostelium
discoideum|Rep: DEAD-box RNA helicase - Dictyostelium
discoideum AX4
Length = 465
Score = 76.2 bits (179), Expect = 6e-13
Identities = 36/69 (52%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 472
V+TF+++ LK ELL+G+YA G+ KPS IQ+ A+ IQ ++IAQ+QSGTGKTA F++
Sbjct: 69 VKTFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLG 128
Query: 473 ILQQIDTSI 499
+L +D SI
Sbjct: 129 MLNCVDPSI 137
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 76.2 bits (179), Expect = 6e-13
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+D LK ELL GI+ GFEKPS IQ+ AI I GRD++A+A++GTGKTA F I L+
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE 106
Query: 482 QIDTSIRE 505
++ + +
Sbjct: 107 KVKPKLNK 114
Score = 49.6 bits (113), Expect = 6e-05
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
ALI+ PTRELA Q +VV LG H C GGTN+R+DI
Sbjct: 117 ALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDI 158
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 75.8 bits (178), Expect = 8e-13
Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 248 TSGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDV 421
T D +W V+ FD M+L LL+G+Y+YGF PS IQ AI + R V
Sbjct: 74 TPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHV 133
Query: 422 IAQAQSGTGKTATFSISILQQIDTS 496
IAQAQSGTGKT FSI +L +ID S
Sbjct: 134 IAQAQSGTGKTGAFSIGVLSKIDVS 158
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/67 (52%), Positives = 45/67 (67%)
Frame = +2
Query: 311 DMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 490
D N+ L + G EKPSAIQQ+ I+P +G DVI QAQSGTGKTATF ILQQ++
Sbjct: 16 DSNMNGLCLLNVLCEGIEKPSAIQQKGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLN 75
Query: 491 TSIRECK 511
+ +C+
Sbjct: 76 EELTQCQ 82
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCH 600
AL+LAPTRELAQQI+KV+ ALGDHLN K +
Sbjct: 83 ALVLAPTRELAQQIEKVMRALGDHLNVKIY 112
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/64 (56%), Positives = 43/64 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +QQ I I G D++ QA+SG GKTA F +SILQQ
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 485 IDTS 496
+DT+
Sbjct: 117 LDTN 120
>UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia
intestinalis|Rep: GLP_15_13424_14974 - Giardia lamblia
ATCC 50803
Length = 516
Score = 72.9 bits (171), Expect = 6e-12
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D NL+EE+L+ I + GFE PS +Q AI P ++ +DVI QA+SG GKTA F +S+L
Sbjct: 130 FSDFNLREEVLQAIISNGFESPSDVQSMAIPPALEHKDVICQAKSGKGKTAVFVLSLLHM 189
Query: 485 ID 490
ID
Sbjct: 190 ID 191
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 72.5 bits (170), Expect = 8e-12
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F MN+K E+L+ + GFEKP+ IQ+ + +G+D+I QAQ+GTGKTA F+I IL
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 485 IDTSI 499
+D SI
Sbjct: 63 LDCSI 67
Score = 34.3 bits (75), Expect = 2.5
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 469 IDSTTNRYKHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
+D + NR +H L++APTRELA QI + LG + +K +GG +
Sbjct: 63 LDCSINRIQH-----LVIAPTRELANQIYDQLNILGKYTCSKIALILGGVS 108
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/64 (51%), Positives = 43/64 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FDD+ LKE LL+ I GFE+PS IQ +I ++G D+I QAQ+GTGKTA F +I+
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGCAIINN 65
Query: 485 IDTS 496
D S
Sbjct: 66 ADFS 69
Score = 37.1 bits (82), Expect = 0.36
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
ALILAPTRELA Q+ + ++ LG H GG + IR
Sbjct: 77 ALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPIDRQIR 119
>UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111;
Eumetazoa|Rep: ATP-dependent RNA helicase DDX25 - Homo
sapiens (Human)
Length = 483
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/67 (50%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAI--MPCIQGRDVIAQAQSGTGKTATFSI 469
V+TF+++ LKEELL+GIYA GF +PS IQ+ A+ M +++IAQ+QSGTGKTA F +
Sbjct: 96 VKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQSQSGTGKTAAFVL 155
Query: 470 SILQQID 490
++L +++
Sbjct: 156 AMLSRVN 162
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/70 (45%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 469
V++F ++NL E+L++GI A GF+KPS IQ++A+ + R++I Q+QSGTGKTA F++
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTL 206
Query: 470 SILQQIDTSI 499
++L ++D +I
Sbjct: 207 NMLSRVDPTI 216
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F+D +LK++LLR + GFE+PS +Q + I I G+DV+ QA++GTGKTA F +S+L
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLN 98
Query: 482 QI 487
Q+
Sbjct: 99 QL 100
>UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23;
Dikarya|Rep: ATP-dependent RNA helicase DBP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 482
Score = 70.1 bits (164), Expect = 4e-11
Identities = 33/66 (50%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSIS 472
++FD++ L ELL+GIYA F+KPS IQ+RA+ + R++IAQ+QSGTGKTA FS++
Sbjct: 92 KSFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLT 151
Query: 473 ILQQID 490
+L +++
Sbjct: 152 MLTRVN 157
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 69.3 bits (162), Expect = 7e-11
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D+ L E++L+ + GFE+PS IQ +AI +QG+DVI QAQ+GTGKTA F + I++
Sbjct: 7 TFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVE 66
Query: 482 QI 487
++
Sbjct: 67 RL 68
Score = 39.9 bits (89), Expect = 0.051
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
AL+L PTRELA Q+ + + +G H K A GG ++ IR
Sbjct: 77 ALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIERQIR 119
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 69.3 bits (162), Expect = 7e-11
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
+V T++ M LK EL+ I G+EKPS IQQRAI QG++++ Q+Q+G+GKTATFSI
Sbjct: 17 EVYPTWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSI 76
Query: 470 SILQQIDTSIRECKL 514
L ++ + + +L
Sbjct: 77 GTLARLRLTSKTTEL 91
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
+I++PTRELA Q + + +LG A AC+GG ++ D++
Sbjct: 92 IIVSPTRELAIQTENTLKSLG----ANTRACVGGNSLGADVK 129
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
V E F DM L +ELL+ IY GFEKPS IQ+ AI ++G +V+ Q++SGTGKT ++
Sbjct: 49 VAEHFSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCG 108
Query: 473 IL 478
+L
Sbjct: 109 VL 110
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/62 (48%), Positives = 46/62 (74%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLER 150
Query: 485 ID 490
ID
Sbjct: 151 ID 152
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDI 636
AL+L PTRELA Q+ ++ I + HL K A GGTN+R+DI
Sbjct: 160 ALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGGTNLRDDI 202
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+++FD+++L + R + GF PS IQ I + G+DVI QA++GTGKTA FSI I
Sbjct: 43 MDSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPI 102
Query: 476 LQQIDTSIRECK 511
L+Q+D S+ +C+
Sbjct: 103 LEQLD-SLEDCR 113
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D D + V F ++ L+ ELLR + A G+E+P+ IQ+ A+ P + GRD++ QA +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 455 ATFSISILQQI 487
A F++ +L ++
Sbjct: 109 AAFALPLLHRL 119
Score = 34.3 bits (75), Expect = 2.5
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
AL+L PTRELA Q+ + + G L A+ GG + +R
Sbjct: 131 ALVLVPTRELAVQVSEAIHRYGRDLGARVLPVYGGAPIGRQVR 173
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF ++ L + +L+ + G+EKPS IQ++AI P + GRDV+ AQ+GTGKT F+ ILQ
Sbjct: 2 TFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQ 61
Query: 482 QIDTSI 499
++ I
Sbjct: 62 RLGGDI 67
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
+LIL PTRELA QIQ+ A G HL + GG + +
Sbjct: 75 SLILTPTRELALQIQESFEAYGKHLPLRSAVIFGGVGQQPQV 116
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/62 (46%), Positives = 46/62 (74%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D LK ELL GI+ G+EKPS IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 485 ID 490
+D
Sbjct: 158 LD 159
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/64 (56%), Positives = 40/64 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 485 IDTS 496
I+ S
Sbjct: 108 IEPS 111
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSIS 472
+E+F ++ L +E+L + GF P+ IQ++AI I+G RD++ QAQ+GTGKTA F I
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 473 ILQQIDTSIR 502
IL+ ID S R
Sbjct: 61 ILETIDESSR 70
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/67 (44%), Positives = 43/67 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D+ LK +L + G+EKPS IQ I + GRDV+ AQ+G+GKTA FS+ +LQ
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 482 QIDTSIR 502
+D ++
Sbjct: 67 NLDPELK 73
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/65 (47%), Positives = 43/65 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+D+ L E +L+ + GFE PS IQQ I + G DV+ AQ+G+GKTA F++ +L
Sbjct: 6 TFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLA 65
Query: 482 QIDTS 496
QID S
Sbjct: 66 QIDPS 70
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
Q + FD LK+ +L+GI GF PS +Q ++I +QG+D+IAQAQ+GTGKTA F+I
Sbjct: 42 QDTQGFDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAI 101
Query: 470 SILQQID 490
IL ++
Sbjct: 102 PILNTLN 108
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1
Query: 475 STTNRYKHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 627
+T NR K + ALI+ PTRELA QI + ++ LG K GG +++
Sbjct: 105 NTLNRNKD--IEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIK 153
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F D NLK +L+ + GF +P+ IQ++AI + G D+I QAQ+GTGKTA F + +L
Sbjct: 56 SFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLN 115
Query: 482 QIDTSIREC 508
ID S ++C
Sbjct: 116 NIDFS-KKC 123
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + + EELL+ I GFE+P+ IQ AI + G+DV QAQ+GTGKTA F I I+
Sbjct: 5 KTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPII 64
Query: 479 QQID 490
+++D
Sbjct: 65 ERLD 68
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF ++ L + LL+ + + GFE+ + IQ I +QG+D+I QAQ+GTGKTA F + +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 482 QIDT 493
++DT
Sbjct: 63 KVDT 66
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
+++APTRELA Q+ + + +G H + GG ++ IR
Sbjct: 74 IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIR 115
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 66.9 bits (156), Expect = 4e-10
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
+T+ D+ E+F ++NL EL++ + KP+ IQ +AI P ++G D+I AQ+G+GKT
Sbjct: 73 NTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKT 132
Query: 455 ATFSISILQQI 487
A F+I IL ++
Sbjct: 133 AAFAIPILNRL 143
Score = 40.7 bits (91), Expect = 0.029
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
A ILAPTRELAQQI++ +LG + + +GG N+ + R
Sbjct: 152 ACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQAR 194
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 66.5 bits (155), Expect = 5e-10
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+++ + EE+ + I GFE+PS IQ +AI + G DVI QAQ+GTGKTA F I ++++
Sbjct: 8 FNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEK 67
Query: 485 IDT 493
+ T
Sbjct: 68 VST 70
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 66.5 bits (155), Expect = 5e-10
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+FD + L ++LR + G+ +P+ IQQ+AI ++GRD++A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 482 QIDT 493
+ T
Sbjct: 62 HLIT 65
Score = 32.7 bits (71), Expect = 7.7
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALIL PTRELA QI + V +LN + GG ++
Sbjct: 78 ALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSI 115
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 66.1 bits (154), Expect = 7e-10
Identities = 30/65 (46%), Positives = 45/65 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D+ L LL+ + + G+E P+ IQ +AI+ + G DV+ AQ+GTGKTA FS+ +L
Sbjct: 6 TFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLS 65
Query: 482 QIDTS 496
+IDT+
Sbjct: 66 RIDTT 70
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF +++L +L + G+E PS IQ + I ++GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 10 TFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLS 69
Query: 482 QIDTSIRE 505
++D RE
Sbjct: 70 RLDLQRRE 77
>UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 457
Score = 65.3 bits (152), Expect = 1e-09
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 2/63 (3%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRA--IMPCIQGRDVIAQAQSGTGKTATFSI 469
V++F+++ LK ELL+G+Y GF +PS IQ+ A +M +++IAQ+QSGTGKTA F +
Sbjct: 37 VKSFEELRLKPELLKGVYQMGFNRPSRIQENALPLMMAQPAQNLIAQSQSGTGKTAAFCL 96
Query: 470 SIL 478
++L
Sbjct: 97 AML 99
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/62 (41%), Positives = 45/62 (72%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ M L +LR + GF+ PS +Q ++I +QG+D++A+A++G+GKTA +SI I+Q
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83
Query: 482 QI 487
++
Sbjct: 84 KV 85
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/69 (39%), Positives = 44/69 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FDDMNL E + + G+ P+ +Q RA P I+G+D+I ++++GTGKTA F + +L++
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 485 IDTSIRECK 511
I R +
Sbjct: 91 IPADERRVR 99
Score = 34.3 bits (75), Expect = 2.5
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
ALIL PTRELA Q+ + L H K A GG ++++
Sbjct: 100 ALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMKQ 139
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/62 (53%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 485 ID 490
I+
Sbjct: 106 IE 107
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ L E LLR + G+E PS IQ I + RDV+ QAQ+GTGKTA+F++ IL +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 485 ID 490
ID
Sbjct: 69 ID 70
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 64.5 bits (150), Expect = 2e-09
Identities = 26/66 (39%), Positives = 45/66 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ LK+ +L IY G++KP+ IQ +++ +QG+D + +A++GTGKTA F+I LQ
Sbjct: 7 FQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQH 66
Query: 485 IDTSIR 502
+ ++
Sbjct: 67 LRAEVQ 72
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISIL 478
TFD + L LL+ I GFE PS IQ+ AI + + RD++A AQ+GTGKTA F +L
Sbjct: 2 TFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLL 61
Query: 479 QQIDTS 496
Q ID S
Sbjct: 62 QNIDAS 67
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIRQ 642
LI+APTREL QI + H+ + A GG+N++E R+
Sbjct: 74 LIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQEQARE 117
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+++NL E +L+ + G+ P+ IQ+++I +QG+D++ AQ+GTGKTA FSI ILQ
Sbjct: 2 TFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQ 61
Query: 482 QI 487
++
Sbjct: 62 KL 63
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TFD L E+L+ I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+FS+ I+Q
Sbjct: 12 TFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQ 71
Query: 482 QI 487
++
Sbjct: 72 RL 73
>UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Homo
sapiens|Rep: HLA-B associated transcript 1 - Homo
sapiens (Human)
Length = 197
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 485 ID 490
++
Sbjct: 107 LE 108
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 485 ID 490
++
Sbjct: 107 LE 108
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/71 (39%), Positives = 46/71 (64%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
++E+FD + L + L+ G+ G KP+ IQ + I ++ +DVI Q+ +G+GKT + +
Sbjct: 1 MIESFDKLGLNQNLIEGLKQEGINKPTDIQIKTIPLALENKDVIGQSPTGSGKTLAYLLP 60
Query: 473 ILQQIDTSIRE 505
I Q+IDTS RE
Sbjct: 61 IFQKIDTSKRE 71
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/70 (42%), Positives = 44/70 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L E LL + + GF + IQ I P + G+DV+ +AQ+GTGKTA F + L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 485 IDTSIRECKL 514
IDTSI++ +L
Sbjct: 77 IDTSIKKPQL 86
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/62 (45%), Positives = 44/62 (70%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F + L E L+R I A G+ +P+ +QQRAI +QGRD++ AQ+GTGKT F++ IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 482 QI 487
++
Sbjct: 62 RL 63
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/64 (46%), Positives = 40/64 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK E+LR I GFE PS +Q I + G D++ QA+SG GKTA F ++ LQQ
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 485 IDTS 496
++ S
Sbjct: 103 LEPS 106
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 63.7 bits (148), Expect = 4e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
V TF ++ L E LL + GF +P+AIQ AI P + GRDV+ A +GTGKTA + +
Sbjct: 3 VTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPA 62
Query: 476 LQQI 487
LQ +
Sbjct: 63 LQHL 66
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 63.3 bits (147), Expect = 5e-09
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISI 475
E F+D L EE+L I G+EKP+ IQ+ + + +D+IAQAQ+GTGKTA F I +
Sbjct: 18 ERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPL 77
Query: 476 LQQID 490
L++ID
Sbjct: 78 LERID 82
>UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2;
Cryptosporidium|Rep: DEAD-box RNA helicase -
Cryptosporidium hominis
Length = 518
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/66 (45%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 481
+ D+NL +LL+GIY GF +PS IQ A+ + ++IAQA +G+GKTATF++++L
Sbjct: 114 WSDLNLSPDLLKGIYNKGFNRPSKIQAAALPLILNSPMNLIAQAHNGSGKTATFALAMLG 173
Query: 482 QIDTSI 499
++DT I
Sbjct: 174 KVDTRI 179
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/67 (41%), Positives = 47/67 (70%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
++VV+TF ++ ++EEL++ G++ PS IQ A+ ++G+DVI AQ+G+GKT F+
Sbjct: 5 NEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFA 64
Query: 467 ISILQQI 487
I ILQ +
Sbjct: 65 IPILQAL 71
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
A +L+PTRELA QI + ALG ++ +C +GG
Sbjct: 92 ACVLSPTRELAIQIAEQFEALGADISLRCAVLVGG 126
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 62.9 bits (146), Expect = 6e-09
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + + +L I A G+E+PS IQ +AI + G D+I QAQ+GTGKTA F++ +L +
Sbjct: 25 FAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSR 84
Query: 485 IDTSIRECKL 514
ID + RE +L
Sbjct: 85 IDPARREPQL 94
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 62.9 bits (146), Expect = 6e-09
Identities = 27/63 (42%), Positives = 44/63 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF ++ L +E+++ I GFE+ + IQ + I +Q +DVI QAQ+GTGKTA F I I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 482 QID 490
+++
Sbjct: 63 KVN 65
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 493 KHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
K+S + AL++APTRELA Q+ + + +G + GG ++ IR
Sbjct: 67 KNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIR 115
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/67 (41%), Positives = 44/67 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L LLR I G+E+PS IQ+++I ++G+DV+ AQ+GTGKTA F++ +L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 485 IDTSIRE 505
+RE
Sbjct: 68 TQNEVRE 74
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDH-LNAKCHACIGGTNVREDIR 639
L+LAPTRELAQQ+ V + H N K + GG++ R
Sbjct: 78 LVLAPTRELAQQVAMAVESYSKHESNVKVASIYGGSDFGSQFR 120
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 62.5 bits (145), Expect = 8e-09
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
E F M LK +LL+ I GFEKP+ IQ ++I + G D++ QAQ+GTGKTA+F I IL
Sbjct: 4 ENFYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPIL 63
Query: 479 QQI 487
++
Sbjct: 64 NRV 66
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
AL+L PTRELA Q+ + + +L + + A GG ++ +R
Sbjct: 74 ALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIELQLR 116
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 62.5 bits (145), Expect = 8e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L ++++ + G+E P+ IQQ AI + GRDV+ QAQ+GTGKTA F++ ++
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 485 IDTSIRE 505
+D + R+
Sbjct: 69 MDLASRD 75
>UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FAL1,
involved in rRNA maturation, DEAD-box superfamily; n=2;
Ostreococcus|Rep: Predicted ATP-dependent RNA helicase
FAL1, involved in rRNA maturation, DEAD-box superfamily
- Ostreococcus tauri
Length = 1222
Score = 62.5 bits (145), Expect = 8e-09
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ M + E+ R + G+ P+ IQ++AI P ++GRDV+A A++G+GKTA F I +L +
Sbjct: 468 FESMEILPEVFRAVKRKGYRVPTPIQRKAIPPALEGRDVVAMARTGSGKTAAFLIPVLSK 527
Query: 485 IDT 493
+ T
Sbjct: 528 LRT 530
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
V F + LKEELLR + GFE P+ +Q ++ + G +I QA++GTGKTA F +++
Sbjct: 72 VSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTGKTAVFVLTV 131
Query: 476 LQQIDT 493
L I+T
Sbjct: 132 LNTINT 137
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+++ +K+ +L + GFEK IQ+ AI + GRDV+ QA +GTGKT +SIS+LQ+
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 485 I 487
I
Sbjct: 64 I 64
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
+ TF ++ L L + GF P+ IQQ+AI +QGRDV+A AQ+GTGKTA + +
Sbjct: 1 MTNTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLP 60
Query: 473 ILQQIDTSIRE 505
++Q + RE
Sbjct: 61 LIQMLSRQSRE 71
Score = 35.1 bits (77), Expect = 1.5
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 627
ALILAPTRELAQQ+ + H GGT++R
Sbjct: 80 ALILAPTRELAQQVFDNLKQYAQHTELAIVTVYGGTSIR 118
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/61 (44%), Positives = 43/61 (70%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ L E ++R I G+E P+ IQ +AI ++G DV+ AQ+GTGKTA+F++ +LQ+
Sbjct: 293 FADLGLSEPIMRAIEELGYEHPTPIQAQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQK 352
Query: 485 I 487
+
Sbjct: 353 L 353
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ + L L+ + A G+E+P+ IQ+ A+ P ++G+D++ A +GTGKTA FS+ +LQ
Sbjct: 37 TFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLLQ 96
Query: 482 QI 487
+I
Sbjct: 97 RI 98
Score = 32.7 bits (71), Expect = 7.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
AL+L PTRELA Q+ + + G L GG + + +R
Sbjct: 110 ALVLVPTRELAMQVAEAIHRYGQKLGISVVPLYGGQVISQQLR 152
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+FD++ L E + R I +G+E+P+ +Q P G+DVI ++++GTGKTA F+I IL+
Sbjct: 21 SFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILE 80
Query: 482 QI 487
+I
Sbjct: 81 RI 82
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL++ PTRELA Q+ + AL H + A GG ++ E +++
Sbjct: 91 ALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYGGASMGEQLQK 134
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 62.1 bits (144), Expect = 1e-08
Identities = 25/67 (37%), Positives = 49/67 (73%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
D+ +TF+++ L+ L+R + G EKP++IQ+ AI ++G+DV+A+A++G+GKT +
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 467 ISILQQI 487
+ +LQ++
Sbjct: 80 LPLLQKL 86
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK EL I GFE PS +Q +A+ + G D++AQA+SG GKTA F ++L+Q
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 485 ID 490
++
Sbjct: 98 VE 99
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 62.1 bits (144), Expect = 1e-08
Identities = 32/80 (40%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +2
Query: 254 GMDPGTLDTDWDQVVE--TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIA 427
G + G D Q E +F DMNL LL+ I A GF++P+ IQ+ I + G+D+ A
Sbjct: 201 GQEAGGFFEDASQYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICA 260
Query: 428 QAQSGTGKTATFSISILQQI 487
A +GTGKTA F++ +L+++
Sbjct: 261 CAATGTGKTAAFALPVLERL 280
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D LK ELL GI+ G+E PS+IQ+ +I + GRD++A+A++GTGK+ + I +L++
Sbjct: 84 FEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 142
Query: 485 ID 490
+D
Sbjct: 143 LD 144
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/43 (44%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDI 636
A+++ PTRELA Q+ ++ I + H+ AK A GGTN+R+D+
Sbjct: 152 AMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDV 194
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/61 (45%), Positives = 43/61 (70%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FD++NL +E+L G+ A F + + +Q I P ++GRDVIA AQ+GTGKTA + + IL +
Sbjct: 3 FDELNLGDEVLDGLDAMNFIETTPVQAATIPPILEGRDVIACAQTGTGKTAAYLLPILDR 62
Query: 485 I 487
+
Sbjct: 63 L 63
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
A+I+APTRELAQQI + V + A GGT+
Sbjct: 75 AVIMAPTRELAQQIDQQVEGFSYFMPVSAVAIYGGTD 111
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/69 (40%), Positives = 45/69 (65%)
Frame = +2
Query: 281 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 460
DW + TF D++L ++ + I G+E P+ IQ AI P + GRDV+ AQ+GTGKTA+
Sbjct: 6 DWTPMT-TFADLDLNPKVQKAIVEAGYESPTPIQAGAIPPALAGRDVLGIAQTGTGKTAS 64
Query: 461 FSISILQQI 487
F++ ++ +
Sbjct: 65 FTLPMITML 73
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/61 (45%), Positives = 42/61 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ LK +LL G+ G+E PS IQ++ I I +D++A++++GTGKT +F I ILQ
Sbjct: 17 FKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQN 76
Query: 485 I 487
I
Sbjct: 77 I 77
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 61.7 bits (143), Expect = 1e-08
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D NL +L++ I GFE+ + IQ + I + +DVI QAQ+GTGKTA F I +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 482 QID 490
+I+
Sbjct: 64 KIN 66
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
A+++APTRELA Q+ + + +G AK GG ++ IR
Sbjct: 74 AIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIR 116
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF M L +++L G+ GF KPS IQ ++I G D+I +A+SGTGKTA F I L+
Sbjct: 25 TFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALE 84
Query: 482 QIDTSI 499
ID I
Sbjct: 85 MIDIKI 90
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGG 615
+ILAPTRE+A QI++V+ +LG + K + IGG
Sbjct: 96 IILAPTREIAIQIKEVIASLGCEIKGLKVESFIGG 130
>UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 419
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/76 (40%), Positives = 47/76 (61%)
Frame = +2
Query: 257 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 436
++P DT V +F +M LK+E+++ I GFE PS +Q + I + +D++ QA+
Sbjct: 21 VEPSNKDTYVGTV--SFQEMGLKKEIMQSITDCGFEHPSEVQSQVIPKALLRQDILCQAK 78
Query: 437 SGTGKTATFSISILQQ 484
SG GKTA F +SIL Q
Sbjct: 79 SGMGKTAVFVLSILNQ 94
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F ++ + +E + + GF P+ IQ +AI + GRDV+ Q+Q+GTGKTA FS+ IL+
Sbjct: 4 SFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILE 63
Query: 482 QID 490
++D
Sbjct: 64 RLD 66
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F+DM L +L + A F P+ IQ +AI ++G+DV+ +AQ+GTGKTA F + L
Sbjct: 9 SFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPALA 68
Query: 482 QIDTSIRECKL 514
+ID S+++ ++
Sbjct: 69 KIDASVKQTQV 79
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D + Q + TF+DM L + L + + A F P+ +Q++AI P + GRD++A AQ+GTGKT
Sbjct: 19 DPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQTGTGKT 78
Query: 455 ATFSISILQQI 487
F I L+ +
Sbjct: 79 LAFIIPALEML 89
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L L+RG+ A G+ P+ +Q RAI + GRD++A AQ+GTGKTA F++ +L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 485 I 487
+
Sbjct: 63 L 63
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 61.3 bits (142), Expect = 2e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
+ F D L +ELL+ I FE P+ +QQ+ I ++ +D+I ++Q+G+GKTA F+I
Sbjct: 2 IKSNFSDYQLSDELLKSISMLNFESPTKVQQQVIPAILEHKDIIVKSQTGSGKTAAFAIP 61
Query: 473 ILQQID 490
I Q +D
Sbjct: 62 ICQLVD 67
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D NLK+ + + GF++PS +Q+ AI ++G D+IAQAQ+GTGKTA F + I+
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 485 I 487
+
Sbjct: 63 M 63
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 61.3 bits (142), Expect = 2e-08
Identities = 32/71 (45%), Positives = 49/71 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF ++ L++E+L+G+ G+++PS IQ +AI I G D+IAQA+SGTGKT F + L+
Sbjct: 44 TFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTGKTIVFGVIALE 103
Query: 482 QIDTSIRECKL 514
+ +RE KL
Sbjct: 104 CV---LRESKL 111
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTN 621
LI+APTRE+A QI+ V+ ++ + KC IGG N
Sbjct: 153 LIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLN 189
>UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_88_2286_3572 - Giardia lamblia ATCC
50803
Length = 428
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D+ +L++ IY YGFE PS +QQ +I IQG+ + AQ+G+GKTA F IS+L
Sbjct: 6 FEDL-ASFDLIKAIYKYGFEIPSPVQQYSIPKLIQGQSISVNAQTGSGKTAAFGISLLSL 64
Query: 485 IDTSIRECK 511
++ C+
Sbjct: 65 VNPQKSICQ 73
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D D D TF+D+ + EL R G+++P+ IQ AI + G+D+I A++G+GKT
Sbjct: 33 DDDKDDDTPTFEDLGVCVELCRACKELGWKRPTKIQIEAIPIALSGKDIIGLAETGSGKT 92
Query: 455 ATFSISILQQI 487
A F+I ILQ++
Sbjct: 93 AAFTIPILQKL 103
Score = 34.7 bits (76), Expect = 1.9
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
+LILAPTREL+ QI++ +I+LG + +GG ++
Sbjct: 112 SLILAPTRELSLQIKEQLISLGSEIGLDVCLILGGLDM 149
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/66 (39%), Positives = 43/66 (65%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
+++ F + N ++L GI G+ + IQ +AI +QGRDV+ AQ+GTGKTA +++
Sbjct: 10 ELLVNFTEFNFNTQILSGIQTQGYRTATPIQIKAIPAILQGRDVVGLAQTGTGKTAAYAL 69
Query: 470 SILQQI 487
+LQQ+
Sbjct: 70 PLLQQL 75
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/70 (37%), Positives = 48/70 (68%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
++ F + L EE+L+ + G E+P+ IQ++AI ++G++VI +A++GTGKT + + I
Sbjct: 1 MDKFLKLGLSEEVLKSLVGLGIEEPTDIQEKAIPEILKGKNVIGKAETGTGKTLAYLLPI 60
Query: 476 LQQIDTSIRE 505
+++ID S E
Sbjct: 61 IEKIDDSKNE 70
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQ 481
F+ + L E LLR I GFE P+ +Q++AI ++ D++A AQ+GTGKTA F ++Q
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 482 QIDTSIR 502
+ID + R
Sbjct: 64 KIDANNR 70
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/67 (37%), Positives = 48/67 (71%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
D+ +TF+++ L+ L+R + G EKP+ IQ+ AI ++G+DV+A+A++G+GKT +
Sbjct: 20 DEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 467 ISILQQI 487
+ +LQ++
Sbjct: 80 LPLLQKL 86
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 60.9 bits (141), Expect = 3e-08
Identities = 28/61 (45%), Positives = 40/61 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F NL++ LL I GF P+ IQ++AI P +QG DV+A A++G+GKTA F I +L
Sbjct: 24 FQSFNLEKPLLDAILKQGFSVPTPIQRKAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNT 83
Query: 485 I 487
+
Sbjct: 84 L 84
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D+ + +LR I G+E P+AIQ I + G DV+ AQ+GTGKTA F+I +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 482 QID 490
+ID
Sbjct: 74 KID 76
>UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1,; n=2;
Theria|Rep: PREDICTED: similar to eukaryotic translation
initiation factor 4A, isoform 1, - Monodelphis domestica
Length = 59
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +2
Query: 266 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG 412
G +++DW+++V++FDDMNL E LL GIYAYGFEK CI+G
Sbjct: 10 GVIESDWNEIVDSFDDMNLSESLLCGIYAYGFEKAICHSVTCNSSCIKG 58
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D NL ++R I GF S IQ A+ + GRD+I +AQ+GTGKTA F I++LQ+
Sbjct: 100 FHDFNLDARIMRSIQDLGFSYASPIQAEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQK 159
Query: 485 IDT 493
+ T
Sbjct: 160 LLT 162
Score = 32.7 bits (71), Expect = 7.7
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
ALILAPTRELA QI K L + + +GG +
Sbjct: 175 ALILAPTRELAMQIAKDADGLSKYADLNIVTVLGGVD 211
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/76 (42%), Positives = 44/76 (57%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
+ D D V TF + L EE+L + GF P+ IQ AI P ++ RDV+ AQ+GTGKT
Sbjct: 39 EEDTDTV--TFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKT 96
Query: 455 ATFSISILQQIDTSIR 502
A F + +L +D R
Sbjct: 97 AAFGLPLLAIVDADER 112
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 60.5 bits (140), Expect = 3e-08
Identities = 26/71 (36%), Positives = 47/71 (66%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
+V +FD + + ++ G+ G + P+AIQ+ AI ++ +D+I Q+Q+G+GKT + +
Sbjct: 1 MVTSFDKLEIDADIAEGLSKQGIKNPTAIQKVAIPLALKNKDIIGQSQTGSGKTLAYLLP 60
Query: 473 ILQQIDTSIRE 505
I Q+ID+S RE
Sbjct: 61 IFQKIDSSKRE 71
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 60.5 bits (140), Expect = 3e-08
Identities = 23/67 (34%), Positives = 46/67 (68%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
++ + TF++++L LL+ + GF +P+ IQ +AI + G+D++A A +G+GKTA F
Sbjct: 186 EEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFL 245
Query: 467 ISILQQI 487
+ +L+++
Sbjct: 246 LPVLERL 252
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+N+ E+ + + GFE+ S IQ AI + +DV QAQ+GTGKTA F I +L+
Sbjct: 6 FKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLEN 65
Query: 485 IDT 493
ID+
Sbjct: 66 IDS 68
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/61 (40%), Positives = 44/61 (72%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++NL ++R ++ GFE+ + IQ++AI ++G+D+I QA++GTGKTA F I +++
Sbjct: 4 FTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEA 63
Query: 485 I 487
I
Sbjct: 64 I 64
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F M L + LLR I+ GF+ P+ IQ++ I ++GRDV+ A++G+GKTA F I +++
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 485 IDTSI 499
+ +++
Sbjct: 131 LKSTL 135
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F+ N ++ G+ A G+++P+ IQ +AI P + G DVI AQ+GTGKTA +++ I+Q
Sbjct: 2 SFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQ 61
Query: 482 QI 487
++
Sbjct: 62 KM 63
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
L++APTRELA QI +LG + + GG N+ + IR+
Sbjct: 74 LVIAPTRELACQISDSFRSLGQRARIRECSIYGGVNMDQQIRR 116
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 60.1 bits (139), Expect = 4e-08
Identities = 24/67 (35%), Positives = 47/67 (70%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
++ ++F+++ L L+R + G EKP+ IQQ AI ++G+DV+A+A++G+GKT +
Sbjct: 42 EEAPKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYL 101
Query: 467 ISILQQI 487
+ +LQ++
Sbjct: 102 LPLLQKL 108
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/69 (36%), Positives = 45/69 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E+F ++L+ LL + G+E PS IQ I + G D++ +AQ+GTGKTA F++ +
Sbjct: 43 IESFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPL 102
Query: 476 LQQIDTSIR 502
L ++D +++
Sbjct: 103 LDRLDLAVK 111
>UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2;
Ostreococcus|Rep: RNA helicase-like protein -
Ostreococcus tauri
Length = 492
Score = 59.7 bits (138), Expect = 6e-08
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 469
+TF+D+ L ELLRG+Y FEKPS IQ + + R++IAQA +G+GKT F++
Sbjct: 87 KTFEDLGLSAELLRGLYGEMKFEKPSKIQAETLPLILMPPHRNLIAQAHNGSGKTTCFTL 146
Query: 470 SILQQIDTSIR 502
+L +ID +++
Sbjct: 147 GMLSRIDPAVK 157
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/84 (36%), Positives = 49/84 (58%)
Frame = +2
Query: 239 LRWTSGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 418
+ +TS D D F + LK+ELL G+ GF++ + +Q+ AI + RD
Sbjct: 1 MAFTSARDTRITTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRD 60
Query: 419 VIAQAQSGTGKTATFSISILQQID 490
V+A+A++GTGKT +F I ILQ ++
Sbjct: 61 VVARAKNGTGKTGSFLIPILQMVN 84
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 59.7 bits (138), Expect = 6e-08
Identities = 25/62 (40%), Positives = 43/62 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F D+ L LL+ + F+KP+ +Q +AI ++GRDV+A+A++G+GKTA + + ILQ
Sbjct: 44 SFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQ 103
Query: 482 QI 487
+
Sbjct: 104 AV 105
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Frame = +2
Query: 266 GTLDTDWD-QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQ 436
G DTD + +F ++ L + ++ G+ A F+KPS IQ RA+ + R++IAQ+Q
Sbjct: 84 GDPDTDSPLSSISSFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQ 143
Query: 437 SGTGKTATFSISILQQID 490
SGTGKT F ++IL ++D
Sbjct: 144 SGTGKTGAFVVTILSRVD 161
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 59.3 bits (137), Expect = 8e-08
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF DMNL LL+ I A F +P+ IQ+ I + G+D+ A A +GTGKTA F + +L+
Sbjct: 182 TFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLE 241
Query: 482 QIDTSIRE 505
++ RE
Sbjct: 242 RLIYKPRE 249
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++NL E+ I GFE+ S IQ AI ++G+D+I AQ+GTGKTA F+I ++
Sbjct: 11 FSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIEL 70
Query: 485 ID 490
++
Sbjct: 71 LE 72
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 59.3 bits (137), Expect = 8e-08
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 472
++TF+++ + E+ + I G+E P +Q+ I + + DV+A AQ+GTGKTA F +
Sbjct: 1 MKTFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLP 60
Query: 473 ILQQIDTSIR 502
+LQQID R
Sbjct: 61 LLQQIDVKNR 70
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 59.3 bits (137), Expect = 8e-08
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F D+ L E L R + A GF+ PS +Q + G DVIAQA+SGTGKT TF + L+
Sbjct: 38 SFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIALE 97
Query: 482 QIDTSIR 502
++D R
Sbjct: 98 RVDAGRR 104
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 59.3 bits (137), Expect = 8e-08
Identities = 24/65 (36%), Positives = 45/65 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F D L ++ L G+ + KP+AIQ+ +I+P +QG+D++A A++G+GKT F I + +
Sbjct: 63 SFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVFE 122
Query: 482 QIDTS 496
++ T+
Sbjct: 123 KLYTN 127
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/66 (39%), Positives = 44/66 (66%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
Q+ E F+ ++L +L+G+ + G+ KPS IQ I + G+D+IA A +G+GKTA F I
Sbjct: 228 QMYENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMI 287
Query: 470 SILQQI 487
I++++
Sbjct: 288 PIIERL 293
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 59.3 bits (137), Expect = 8e-08
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +F +M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 292 MSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPI 351
Query: 476 LQQI 487
L+++
Sbjct: 352 LERL 355
Score = 33.5 bits (73), Expect = 4.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 627
+IL PTRELA Q V + L H + K +GG +++
Sbjct: 368 VILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLK 405
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 58.8 bits (136), Expect = 1e-07
Identities = 22/61 (36%), Positives = 46/61 (75%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F +M L + LL+ + G+ +P+ IQ++AI ++G+D++A+A++G+GKTA +++ ++Q+
Sbjct: 8 FHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQR 67
Query: 485 I 487
I
Sbjct: 68 I 68
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D +L +L + ++ P+ IQQ AI +QG+D++A A++GTGKTA F++ IL++
Sbjct: 3 FSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAGARTGTGKTAAFALPILEK 62
Query: 485 IDTSIRECK 511
+ + R K
Sbjct: 63 LSSKERNKK 71
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
V TF + L EL + G++ P+AIQ + +QGRD+IA A++G+GKTA F +
Sbjct: 49 VSPTFASLGLCSELCASVSTLGWKSPTAIQSEVLPYALQGRDIIALAETGSGKTAAFGLP 108
Query: 473 ILQQI 487
ILQ++
Sbjct: 109 ILQRL 113
Score = 35.9 bits (79), Expect = 0.83
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
ALILAPTREL QI + ++A+G L +GG
Sbjct: 122 ALILAPTRELCLQISQQILAMGGTLGVTVVTLVGG 156
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D + +F + NL +LRG+ A F P+ IQQ+ I + G+D++ A +G+GKT
Sbjct: 782 DAATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKT 841
Query: 455 ATFSISILQQI 487
A F + IL+++
Sbjct: 842 AAFVVPILERL 852
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/67 (40%), Positives = 45/67 (67%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
V++F + +L ELL I + + +P+ IQ AI +QG+D++ A++G+GKTA F+I I
Sbjct: 97 VQSFTEFDLVPELLESIQSLKYTQPTPIQAAAIPHALQGKDIVGIAETGSGKTAAFAIPI 156
Query: 476 LQQIDTS 496
LQ + T+
Sbjct: 157 LQTLYTA 163
Score = 39.9 bits (89), Expect = 0.051
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
AL+LAPTRELA QI++ ALG + + IGG ++ E R
Sbjct: 169 ALVLAPTRELAFQIKETFDALGSSMGLRSVCIIGGMSMMEQAR 211
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/63 (39%), Positives = 42/63 (66%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F M L + ++RGI G++ P+ IQ++ I + GRDV+A A++G+GKTA F I + ++
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 485 IDT 493
+ T
Sbjct: 100 LKT 102
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALIL+PTRELA Q Q+ + +G K +GG ++
Sbjct: 111 ALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSM 148
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ L E++ I + G+ + + IQ++ I + G+D+ QAQ+GTGKTA F I ++
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 485 IDTSIRE 505
+D SI +
Sbjct: 63 VDISINQ 69
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F+ + L +L+ I G+ +PSAIQ +AI ++G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 6 SFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
Score = 37.1 bits (82), Expect = 0.36
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
AL+L PTRELA Q+ + V G HL+ K GG +
Sbjct: 80 ALVLTPTRELAAQVAESVKNYGQHLSLKSTVVFGGVKI 117
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 58.4 bits (135), Expect = 1e-07
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISI 475
F D+ L + +L+ + G+ P+ IQ++AI P ++GRD++ AQ+GTGKTA F SI
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 476 LQQIDTSI--RECKL 514
L++ D I + C++
Sbjct: 64 LREADNRIPFKSCRM 78
Score = 34.3 bits (75), Expect = 2.5
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 633
L+LAPTREL QI G K + +GGT+V +D
Sbjct: 79 LVLAPTRELVSQIAASAKDYGALAGLKVQSIVGGTSVNKD 118
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/63 (42%), Positives = 42/63 (66%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF+++ L L+ GF+ PS IQ I ++GRD+IA A++G+GKTA+F+I IL
Sbjct: 4 KTFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPIL 63
Query: 479 QQI 487
Q+
Sbjct: 64 NQL 66
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
A+IL PTRELA QI + A+G +N C IGG
Sbjct: 75 AVILTPTRELAVQIGEQFNAIGAPMNVNCSVVIGG 109
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +F M+L +LRG+ + GF KP+ IQ + I + G+DV+ A +G+GKTA F + I
Sbjct: 275 LSSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPI 334
Query: 476 LQQI 487
L+++
Sbjct: 335 LERL 338
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
F D+ L + +++ + G+E PS IQ I + GRDV+ QAQ+GTGKTA F++ +L
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLL 74
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ L +L + GF P+ IQ AI ++GRD + +AQ+GTGKTA FS+ +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 485 IDTS 496
++ S
Sbjct: 88 LNLS 91
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FD E LL+ + G+ PS IQ+ A + GRD++ QAQ+GTGKTA F++ +L++
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 485 IDT 493
+++
Sbjct: 133 LES 135
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++L LL+ + GF +P+ IQ AI P + GRDV+A A +G+GKTA F + IL Q
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 485 I 487
+
Sbjct: 63 L 63
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 478
TF D+ L LL+ + PS IQQ+AI + ++V+ AQ+GTGKTA F + +L
Sbjct: 2 TFSDLGLNAALLQSLSENNISSPSEIQQKAIPVILNSTKNVVGVAQTGTGKTAAFGLPVL 61
Query: 479 QQIDTSIRECKL 514
QQI+ S+++ ++
Sbjct: 62 QQINPSLQQTQV 73
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +2
Query: 281 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 460
D V+ F + L E LLR I +E P+ IQ R+I ++G D++ AQ+GTGKTA
Sbjct: 51 DESAVLTDFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAA 110
Query: 461 FSISILQQI 487
F + IL +I
Sbjct: 111 FVLPILHRI 119
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FD++ L +E+LR I G+ P+ +Q +I ++GRD++A AQ+GTGKTA F + +
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMNN 107
Query: 485 ID 490
++
Sbjct: 108 LE 109
>UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 515
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
VE+F+++ L ++R ++ FE P+ +Q + I +QGRDV A A +G+GKTA F I
Sbjct: 15 VESFEELGLSHSIIRALHKMNFEIPTPVQNKTIPIALQGRDVCASAVTGSGKTAAFLIPT 74
Query: 476 LQQI 487
++++
Sbjct: 75 VERL 78
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/74 (39%), Positives = 49/74 (66%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
+VV +F ++ L+ LLRGI + P+A+Q +AI +QGRD++A++ +GTGKT + +
Sbjct: 44 EVVASFAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLL 103
Query: 470 SILQQIDTSIRECK 511
IL +T +R+ K
Sbjct: 104 PILH--NTLLRKGK 115
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/67 (35%), Positives = 43/67 (64%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F M L ++ L G+ G+ P+ IQ++AI ++G D+IA A++G+GKTA + + I+ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 485 IDTSIRE 505
++T E
Sbjct: 75 LETHSTE 81
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
+LI+ PTRELA Q KV LG N K IGG+ + +
Sbjct: 85 SLIICPTRELALQTIKVFNELGKLTNLKASLIIGGSKLSD 124
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 57.6 bits (133), Expect = 2e-07
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
D+ TF D+N+ + +L + G+ P+ IQ AI +QGRD++ AQ+G+GKTA F
Sbjct: 40 DENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLSAQTGSGKTAAFV 99
Query: 467 ISILQQIDTSIRECKL 514
I +L ++ + KL
Sbjct: 100 IPVLDRLSRATSFDKL 115
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ + E+LR I G++ + +QQ+AI +G DV+A AQ+GTGKTA F++ ILQ+
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 485 I 487
+
Sbjct: 63 M 63
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 493 KHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
+HS ALIL PTRELA Q+ + A H+N GG
Sbjct: 71 QHSNARALILTPTRELAAQVADNISAYSKHMNISVLTIYGG 111
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+++ L +LL I G+ +P+ IQ +AI + G D+I AQ+GTGKTA +++ IL +
Sbjct: 7 FEELKLNRQLLNAIEEAGYTEPTEIQSKAIPQILAGHDIIGVAQTGTGKTAAYALPILMK 66
Query: 485 I 487
I
Sbjct: 67 I 67
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/70 (37%), Positives = 44/70 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ + L +L + + G+E PS IQ++ I + +D+I QAQ+GTGKTA F + +L +
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 485 IDTSIRECKL 514
I+ +I +L
Sbjct: 74 INLNINAPQL 83
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 57.6 bits (133), Expect = 2e-07
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F ++ L +L + A G+E PS IQ ++I + G ++ AQ+GTGKTA F++ +L
Sbjct: 25 SFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLS 84
Query: 482 QIDTSIRE 505
+ID ++ E
Sbjct: 85 RIDANVAE 92
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR--DVIAQAQSGTGKTATFSISIL 478
+ + L +LL+GI GF KPS IQQ A+ P I G ++IAQA++G+GKTATF++++L
Sbjct: 101 WSQLPLSPDLLKGIQNMGFAKPSKIQQCAL-PLILGSCTNIIAQAKNGSGKTATFALAML 159
Query: 479 QQIDTSI 499
+++ ++
Sbjct: 160 SKVNVNV 166
>UniRef50_A5E572 Cluster: ATP-dependent RNA helicase DBP9; n=2;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 606
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISIL 478
T+D +NL LL+ I GFE P+ IQ AI ++ RD+IA+A +G+GKTA ++I I+
Sbjct: 21 TWDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPII 80
Query: 479 QQI 487
Q I
Sbjct: 81 QNI 83
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 57.2 bits (132), Expect = 3e-07
Identities = 23/71 (32%), Positives = 49/71 (69%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D D + ++F ++ L + +L+ + G+ +P+ IQ++ I I+G+D++ +A++G+GKT
Sbjct: 4 DEDNETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRARTGSGKT 63
Query: 455 ATFSISILQQI 487
A F+I ++Q+I
Sbjct: 64 AAFTIPLIQKI 74
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ T+ + NL E+L I G+EKPS IQ ++I + GRD++ A++G+GKT F I +
Sbjct: 412 IRTWQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPM 471
Query: 476 LQQIDTSIRECK 511
L I R K
Sbjct: 472 LIYISKQPRLTK 483
Score = 37.5 bits (83), Expect = 0.27
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL++APTREL QQI+K H + + +GG ++ + Q
Sbjct: 492 ALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIEDQAYQ 535
>UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
MAK5 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 754
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/77 (36%), Positives = 50/77 (64%)
Frame = +2
Query: 254 GMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 433
G+D +L D D + ++++L + G+ GF++P+AIQ++AI +QG+DVI +A
Sbjct: 170 GVD-ASLPKDTDLPKWSMENVSLSTYTINGLAGCGFKEPTAIQRKAIPLALQGKDVIGKA 228
Query: 434 QSGTGKTATFSISILQQ 484
+G+GKT + I IL++
Sbjct: 229 TTGSGKTLAYGIPILER 245
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/62 (38%), Positives = 40/62 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F MNL +L+G+ GFE P+ IQ + I + G+D++ A +G+GKTA F + IL+
Sbjct: 260 SFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILE 319
Query: 482 QI 487
++
Sbjct: 320 RL 321
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +FDD+ L E + + ++KP+ +Q+ AI I GRD++A AQ+G+GKTA F + I
Sbjct: 294 ITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPI 353
Query: 476 LQQI 487
L Q+
Sbjct: 354 LNQM 357
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +FDD+ L + L+G+ G+ KP+ IQ+ I + G+D++ AQ+G+GKT F I I
Sbjct: 50 INSFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPI 109
Query: 476 LQQI 487
L+++
Sbjct: 110 LERL 113
Score = 32.7 bits (71), Expect = 7.7
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 627
AL++ PTRELA QI + + +G+H IGG +++
Sbjct: 126 ALVITPTRELAYQIFEELRRVGEHHEFSAGLIIGGKDLK 164
>UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 549
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++NL +LL I ++ + IQ++AI P + G+DV AQ+GTGKTA F I ++++
Sbjct: 3 FSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTGKTAAFVIPVMER 62
Query: 485 I 487
I
Sbjct: 63 I 63
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 56.8 bits (131), Expect = 4e-07
Identities = 29/71 (40%), Positives = 39/71 (54%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
+Q + F N L + + F PS IQ + I +QGRD IA AQ+GTGKTA F+
Sbjct: 2 NQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFA 61
Query: 467 ISILQQIDTSI 499
+ ILQ + I
Sbjct: 62 LPILQNLSPEI 72
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/68 (38%), Positives = 45/68 (66%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+ F D+ L LLR + G+ KP+ IQ ++I ++GRD++ AQ+GTGKTA+F++ +L
Sbjct: 7 QAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLL 66
Query: 479 QQIDTSIR 502
++ + R
Sbjct: 67 HRLAATPR 74
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/62 (43%), Positives = 38/62 (61%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+D N LL + + GF KP+ IQ AI + D++A AQ+GTGKTA + + IL
Sbjct: 2 TFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPILH 61
Query: 482 QI 487
+I
Sbjct: 62 KI 63
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F +++L E L + GFE P+ IQ +AI P + G+DVI A +GTGKTA F + ++
Sbjct: 5 SFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLID 64
Query: 482 QI 487
++
Sbjct: 65 RL 66
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/62 (41%), Positives = 38/62 (61%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+FD ++ GI G+ P+ IQ++ I + GRDVI AQ+GTGKTA F + ILQ
Sbjct: 2 SFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPILQ 61
Query: 482 QI 487
++
Sbjct: 62 RL 63
Score = 37.9 bits (84), Expect = 0.21
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
A+I+ PTRELA+QIQ V+ ALG + + GG + I++
Sbjct: 73 AMIVTPTRELAEQIQGVIEALGKYTGLRSVTLYGGVGYQGQIQR 116
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 56.8 bits (131), Expect = 4e-07
Identities = 21/61 (34%), Positives = 45/61 (73%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++ L + +L+ + G+++P+ IQ AI ++G+DV+ +A++G+GKTAT+++ ++Q+
Sbjct: 11 FHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQK 70
Query: 485 I 487
I
Sbjct: 71 I 71
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F M L EL++GI G++ P+ IQ++ I ++GRDV+A A++G+GKTA F I + ++
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 485 I 487
+
Sbjct: 101 L 101
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALIL+PTRELA Q K + LG + K +GG ++
Sbjct: 112 ALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSM 149
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 56.8 bits (131), Expect = 4e-07
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +2
Query: 263 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 442
P T D ++D ++ F M L E +LRG+ F PS IQ RAI G D++ QA+SG
Sbjct: 11 PRTADVEFDLSLQ-FSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSG 69
Query: 443 TGKTATFSISILQ 481
TGKT F++ I +
Sbjct: 70 TGKTLVFTVLITE 82
>UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containing
protein; n=1; Babesia bovis|Rep: DEAD/DEAH box helicase
domain containing protein - Babesia bovis
Length = 649
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/76 (34%), Positives = 47/76 (61%)
Frame = +2
Query: 269 TLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTG 448
T DT+W D+ L L++ ++ G++ PS IQ + I ++G+D++A A++G+G
Sbjct: 122 TSDTNWS-------DLGLSRSLIKAVFDMGYKAPSIIQSKVIPVALEGKDLLATAETGSG 174
Query: 449 KTATFSISILQQIDTS 496
K+A F I LQ++ T+
Sbjct: 175 KSAAFLIPTLQRLITA 190
Score = 33.5 bits (73), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
ALIL PTRELA Q V +AL +L GG V+E
Sbjct: 212 ALILLPTRELAAQCYDVFLALTQNLTQNGVLITGGVPVKE 251
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 56.8 bits (131), Expect = 4e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Frame = +2
Query: 260 DPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQS 439
DP T D + +F MNL LLR + + F P+ IQ RAI + GRD++ A +
Sbjct: 212 DPTTTDPT---LPSSFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVT 268
Query: 440 GTGKTATFSISILQQI 487
G+GKTA F + IL+++
Sbjct: 269 GSGKTAAFMVPILERL 284
>UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP9 -
Pichia guilliermondii (Yeast) (Candida guilliermondii)
Length = 586
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 481
+++ L LL+ +Y GFEKP+ IQ AI ++ RD+IA+A +G+GKT +SI I+Q
Sbjct: 37 WENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPIIQ 96
Query: 482 QI 487
I
Sbjct: 97 NI 98
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/59 (42%), Positives = 41/59 (69%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+F D+ L +ELL+ + G+E+P+ +Q AI + RD+IA AQ+GTGKTA+F + ++
Sbjct: 2 SFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSIS 472
++ F+ + L + LL G+ GFE P+ IQQ++I ++ D I AQ+GTGKTA F +
Sbjct: 12 LKNFEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLP 71
Query: 473 ILQQIDTSIRE 505
+L ID + RE
Sbjct: 72 LLDLIDVNSRE 82
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNVREDIR 639
ALILAPTRELAQQI + + HL GG N+ IR
Sbjct: 85 ALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQIR 128
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 56.4 bits (130), Expect = 5e-07
Identities = 22/61 (36%), Positives = 43/61 (70%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L E+L++ + + G+E+ + IQ+ ++ + G+D+IAQA++GTGKTA F + +L +
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 485 I 487
+
Sbjct: 66 L 66
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/71 (38%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSIS 472
++ F + L+ + + + A GF++PS IQ++AI + Q D+I QAQ+GTGKTA F +
Sbjct: 1 MDKFTALGLEPWITQCLEAKGFKEPSPIQEQAIPVLLSQDHDIIGQAQTGTGKTAAFGLP 60
Query: 473 ILQQIDTSIRE 505
I+Q+I+ +++
Sbjct: 61 IVQKIEPGLKK 71
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ + L + L + + G+E + IQ I ++GRDV+ AQ+GTGKTA F++ IL
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 485 IDTSIR 502
ID +R
Sbjct: 71 IDVKVR 76
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 257 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 436
+D +LDT V +F+ MNL ++L+ G+ P+ IQQ I + G+D+ A A
Sbjct: 137 IDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAA 193
Query: 437 SGTGKTATFSISILQQI 487
+GTGKTA F + IL+++
Sbjct: 194 TGTGKTAAFVLPILERM 210
>UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Rep:
DEAD-box helicase 2 - Plasmodium falciparum
Length = 562
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+D+N+ EE+L I G++KP+ IQ+ + +D+I +++G+GKTA F I ILQ
Sbjct: 157 TFEDLNICEEILESIKELGWKKPTEIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQ 216
Query: 482 QI 487
+
Sbjct: 217 DL 218
>UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_99,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 706
Score = 56.4 bits (130), Expect = 5e-07
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ M L EL R I + GF P+ IQ++AI + GRD++A +++G+GKTA F I ++ +
Sbjct: 12 FESMGLIPELYRAIKSQGFNVPTPIQRKAIPQILAGRDIVACSKTGSGKTAAFLIPLINK 71
Query: 485 I 487
+
Sbjct: 72 L 72
>UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;
n=4; core eudicotyledons|Rep: DEAD-box ATP-dependent RNA
helicase 38 - Arabidopsis thaliana (Mouse-ear cress)
Length = 496
Score = 56.4 bits (130), Expect = 5e-07
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYA-YGFEKPSAIQQRAIMPCIQG---RDVIAQAQSGTGKTATFSIS 472
F+D+NL EL++G+Y FEKPS IQ ++ P I + +IAQA +G+GKT F +
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISL-PMIMTPPHKHLIAQAHNGSGKTTCFVLG 151
Query: 473 ILQQIDTSIRE 505
+L ++D ++RE
Sbjct: 152 MLSRVDPTLRE 162
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/70 (37%), Positives = 46/70 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F M L +L+GI G++ P+ IQ++ I ++GRD++A A++G+GKTA F I + ++
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 485 IDTSIRECKL 514
+ IR+ K+
Sbjct: 98 L--KIRQAKV 105
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALIL+PTRELA Q K + LG K +GG N+
Sbjct: 109 ALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNM 146
>UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 440
Score = 56.0 bits (129), Expect = 7e-07
Identities = 27/71 (38%), Positives = 44/71 (61%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F + L E++L GI G+ PS IQ AI ++G++++ Q+QSG+GKT F +S LQ
Sbjct: 26 SFQECKLNEDILDGINGMGYITPSQIQSYAIPIILKGKNLVMQSQSGSGKTMAFLLSTLQ 85
Query: 482 QIDTSIRECKL 514
I+ C++
Sbjct: 86 LINRKDPFCQV 96
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/63 (38%), Positives = 44/63 (69%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF D+ L E+L+ + G++KP+ IQ+ +I +Q +D+I AQ+G+GKTA+F + ++
Sbjct: 9 KTFKDLGLIPEVLKVVEYLGYKKPTRIQENSIPVALQKKDIIGIAQTGSGKTASFLLPMV 68
Query: 479 QQI 487
Q +
Sbjct: 69 QHL 71
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F E+++ + G+EK + IQQ+AI +G D+ A AQ+GTGKTA FS+ ++Q
Sbjct: 2 SFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLIQ 61
Query: 482 QI 487
Q+
Sbjct: 62 QL 63
Score = 32.7 bits (71), Expect = 7.7
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
ALI APTRELA+QI + A + N A GG + R
Sbjct: 77 ALIFAPTRELAEQIADNIKAYTKYTNLSVAAIFGGRKMSSQER 119
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 56.0 bits (129), Expect = 7e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F+ + + + LL I G+EKP+ IQ RAI + DV A AQ+GTGKTA F + +LQ
Sbjct: 2 SFEKLGVIKPLLSAIKDLGYEKPTTIQTRAIPLILAKSDVFATAQTGTGKTAAFGLGMLQ 61
Query: 482 QI 487
++
Sbjct: 62 RL 63
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 56.0 bits (129), Expect = 7e-07
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TFD L E L R + P+ IQ+RAI + GRD++ AQ+GTGKTA F++ +L
Sbjct: 5 TFDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLH 64
Query: 482 QIDT 493
+ T
Sbjct: 65 HLMT 68
Score = 32.7 bits (71), Expect = 7.7
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
ALIL+PTRELA QI + + L + GG +VR I+
Sbjct: 80 ALILSPTRELAVQIAESIADLSEGTPISHCVVFGGVSVRPQIQ 122
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 56.0 bits (129), Expect = 7e-07
Identities = 25/67 (37%), Positives = 42/67 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ NL+ L+ + FEKP+ IQ R I ++ ++I Q+Q+GTGK+ F + ++Q
Sbjct: 6 FEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQTGTGKSHAFLLPLMQL 65
Query: 485 IDTSIRE 505
ID+ I+E
Sbjct: 66 IDSEIKE 72
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQ 481
F M L + +L I G+E P+ IQ++ I + G++ VI QAQ+GTGKTA F I +++
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 482 QID 490
++D
Sbjct: 64 RLD 66
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 56.0 bits (129), Expect = 7e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++ + E+ +GI GF + + IQ++A+ + G+DV QAQ+GTGKTATF ISI +
Sbjct: 3 FTELQIPAEVQKGIDETGFTQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTK 62
Query: 485 I 487
+
Sbjct: 63 L 63
Score = 36.3 bits (80), Expect = 0.63
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
ALILAPTREL QI+K ALG + A GG +
Sbjct: 77 ALILAPTRELVVQIEKDAQALGKYTGFNIQAIYGGVD 113
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/62 (38%), Positives = 44/62 (70%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E+F+DM L +++ I + + +PS+IQ +A+ + GRD++ A++G+GKTA F+I +
Sbjct: 117 IESFNDMCLHPSIMKDIAYHEYTRPSSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPM 176
Query: 476 LQ 481
LQ
Sbjct: 177 LQ 178
Score = 40.7 bits (91), Expect = 0.029
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVRE 630
AL+LAPTRELAQQI+K V A L + K +GGTN+ +
Sbjct: 194 ALVLAPTRELAQQIEKEVQAFSRSLESLKNCIVVGGTNIEK 234
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 56.0 bits (129), Expect = 7e-07
Identities = 23/59 (38%), Positives = 43/59 (72%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
F+ M L LL+ + G+ +P+ IQ++AI ++G+D++A+A++G+GKTA ++I +LQ
Sbjct: 9 FEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQ 67
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + + LL+G+ A G +P IQ +AI ++G+D++ AQ+G+GKTA FS+ ILQ+
Sbjct: 89 FAALGITGVLLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQK 148
Query: 485 I 487
I
Sbjct: 149 I 149
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L ELL + GFE + IQQ +I + G+D+I QA++G+GKTA FS+ IL +
Sbjct: 49 FSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPILNK 108
Query: 485 ID 490
I+
Sbjct: 109 IN 110
>UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyces
cerevisiae ATP-dependent RNA helicase MAK5; n=1;
Yarrowia lipolytica|Rep: Similarities with sp|P38112
Saccharomyces cerevisiae ATP-dependent RNA helicase MAK5
- Yarrowia lipolytica (Candida lipolytica)
Length = 998
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
T + L L++G+YA G++ P+ IQ+++I P + G DVI +A +G+GKT + + IL
Sbjct: 358 TLNGEQLNYSLIQGLYALGYKSPTEIQKKSIPPILAGDDVIGKASTGSGKTLAYGLPILH 417
Query: 482 Q 484
+
Sbjct: 418 R 418
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 55.6 bits (128), Expect = 1e-06
Identities = 20/64 (31%), Positives = 44/64 (68%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
++ F ++ + + ++ + + GF++P+ IQ+ +I +QG D++ QAQ+GTGKT F I +
Sbjct: 1 MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL 60
Query: 476 LQQI 487
++++
Sbjct: 61 IEKV 64
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ + +++ GF+ P+ IQ +AI +Q RDVI AQ+G+GKTA F+I ILQ
Sbjct: 106 FSDLGVIPQIVEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPILQA 165
Query: 485 I 487
+
Sbjct: 166 L 166
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
A +LAPTRELA QI + V ALG + + +GG ++
Sbjct: 175 ACVLAPTRELAYQISQQVEALGSTIGVRSATIVGGMDM 212
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 281 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 460
D + V+TF+D +++ I +EKP+AIQ +A+ + GRDVI A++G+GKTA
Sbjct: 222 DVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAA 281
Query: 461 FSISILQQI 487
F + ++ I
Sbjct: 282 FVLPMIVHI 290
>UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
dbp-9 - Neurospora crassa
Length = 676
Score = 55.6 bits (128), Expect = 1e-06
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D+ L L++ + FEKP+ +Q++AI + G+DV+ +A++G+GKTA + + +L
Sbjct: 96 TFSDLGLDPRLVQAVAKQSFEKPTLVQRKAIPLALAGQDVLCKAKTGSGKTAAYVLPVLS 155
Query: 482 QI 487
I
Sbjct: 156 GI 157
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/71 (35%), Positives = 42/71 (59%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D + ++ +F D L E + R + + P+ IQ + I + GRDV+ AQ+GTGKT
Sbjct: 8 DMERTHLLTSFQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKT 67
Query: 455 ATFSISILQQI 487
A+F++ IL ++
Sbjct: 68 ASFALPILHRL 78
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E F + L LL+ + GFE P+ IQ+ AI ++G +++ QA +GTGKTA + + +
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 476 LQQI 487
LQ+I
Sbjct: 61 LQRI 64
Score = 36.3 bits (80), Expect = 0.63
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
LI+ PTRELA Q+ V LG +L + A GG + IR
Sbjct: 73 LIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIR 114
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L EL+ + A G+E P+ IQ AI + G D++A AQ+GTGKTA F + L++
Sbjct: 31 FSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSLER 90
Query: 485 I 487
+
Sbjct: 91 L 91
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/61 (37%), Positives = 42/61 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FD + L +L I G+ + + +QQ+ I ++G+D++A AQ+GTGKTA+F++ +L+Q
Sbjct: 24 FDTLGLSSPILNAIAECGYLQLTQVQQQVIPLALEGKDIMACAQTGTGKTASFALPVLEQ 83
Query: 485 I 487
+
Sbjct: 84 L 84
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/66 (36%), Positives = 44/66 (66%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
Q +E+F+ L+ +L I G++KP+ +Q+ A+ + GRD++A AQ+G+GKTA F++
Sbjct: 193 QPIESFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAV 252
Query: 470 SILQQI 487
I+ +
Sbjct: 253 PIINTL 258
>UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 1130
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/66 (37%), Positives = 42/66 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ MNL + + I GF P+ IQ++AI ++GRDV+A +++G+GKTA F I ++ +
Sbjct: 301 FESMNLVYPVYKAIKTRGFNMPTPIQRKAIPLILEGRDVVACSRTGSGKTAAFIIPLINK 360
Query: 485 IDTSIR 502
+ R
Sbjct: 361 LQNHSR 366
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
V+E FD++ L + I +++P+ IQ+ AI ++ RD++A AQ+G+GKTA F I
Sbjct: 182 VIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIP 241
Query: 473 ILQQI 487
I+ +
Sbjct: 242 IINHL 246
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF ++NL LLR G++KP+ IQ I + GRD+ A A +G+GKTA F++ L
Sbjct: 167 DTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTL 226
Query: 479 QQI 487
+++
Sbjct: 227 ERL 229
Score = 39.9 bits (89), Expect = 0.051
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
LIL PTRELA QI ++ L + KC +GG +VRE
Sbjct: 242 LILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVRE 280
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/65 (38%), Positives = 42/65 (64%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L L GI A G+ + +Q +++ P ++G DVIAQA +G+GKTA F + +LQ+
Sbjct: 28 FSALPLSPALAPGIDALGYTVLTPVQAQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQK 87
Query: 485 IDTSI 499
+D ++
Sbjct: 88 LDPAL 92
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+++ L LL + G ++PS IQ +AI P ++G+DV+ +Q+G+GKTA F + +LQ+
Sbjct: 22 FEELGLIAPLLATLAQAGHKRPSLIQTQAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQK 81
Query: 485 I 487
+
Sbjct: 82 L 82
Score = 36.3 bits (80), Expect = 0.63
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
ALIL PTRELA Q V LG L+ K GGT+ + ++
Sbjct: 93 ALILEPTRELAAQTAAVCRQLGRRLSLKTRVICGGTSREQQVQ 135
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ + L E +R I G+ P+ IQ I +QG+D++A AQ+GTGKTA F + I++
Sbjct: 25 TFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
+L+L PTRELA Q++ A +L + A GG ++R +++
Sbjct: 99 SLVLTPTRELAAQVEASAKAYTKYLALRSDAVFGGVSIRPQVKR 142
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F + L + LLR + ++ P+ +Q +AI + G+DV+A AQ+GTGKTA F++ +LQ
Sbjct: 2 SFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQ 61
Query: 482 QI 487
++
Sbjct: 62 RL 63
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
L+L PTRELA+Q+ + IA G L+ + A GG ++
Sbjct: 78 LVLVPTRELAEQVLQSFIAYGKGLDLRFLAAYGGVSI 114
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +2
Query: 335 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 487
LR I G+ P+AIQ +AI + GRDV+ AQ+G+GKTA F++ +LQQ+
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQL 67
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK E+L ++ G P+ IQ A+ ++G+D+I QA++GTGKT F++ I ++
Sbjct: 3 FKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAER 62
Query: 485 IDTS 496
+ S
Sbjct: 63 LAPS 66
Score = 32.7 bits (71), Expect = 7.7
Identities = 18/36 (50%), Positives = 22/36 (61%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGT 618
AL+L PTRELA Q+ + A+ HL K A GGT
Sbjct: 75 ALVLTPTRELALQVASELTAVAPHL--KVVAVYGGT 108
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF D L ++ + I A G+ +P+ IQ +AI + G DV+ AQ+GTGKTA FS+ IL
Sbjct: 21 TFADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILN 80
Query: 482 QI 487
++
Sbjct: 81 RL 82
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 482 QIDT 493
+D+
Sbjct: 83 NLDS 86
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/65 (36%), Positives = 43/65 (66%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E+F + +++ +LR I FE+P+ IQ+ AI ++G+D+I A +G+GKT F I
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGI 60
Query: 476 LQQID 490
+Q+I+
Sbjct: 61 IQKIE 65
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL+L PTRELA+Q+Q + H + GG + IRQ
Sbjct: 72 ALVLTPTRELAEQVQNSLKEFSRHKQLRVAPIYGGVAINPQIRQ 115
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D L EL+ I+ GF + IQ + + ++G+D I +AQ+GTGKTA F ISI+ Q
Sbjct: 11 FHDFKLSNELMHAIHDLGFPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQ 70
Query: 485 I 487
+
Sbjct: 71 L 71
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ M L EE+ RG+ G+ P+ IQ++A+ + G D+ A A++G+GKTA F + ++Q+
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 485 I 487
+
Sbjct: 111 L 111
Score = 32.7 bits (71), Expect = 7.7
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALIL+PTR+LA Q K LG + K +GG ++ +
Sbjct: 122 ALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEE 165
>UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ATP-dependent RNA
helicase - Entamoeba histolytica HM-1:IMSS
Length = 450
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/66 (36%), Positives = 41/66 (62%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ TFD + +K+ LL + +G KP+ IQQ I P + +V+ A++G+GKTA F++ I
Sbjct: 29 LNTFDGLGIKQFLLPTLKQFGIIKPTKIQQLCIPPLLSFHNVLGGAETGSGKTAAFALPI 88
Query: 476 LQQIDT 493
+ + T
Sbjct: 89 IHHLST 94
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
AL+L PTRELA QI A G +N + +GG +V
Sbjct: 101 ALVLTPTRELASQIADQFKAFGACINIRVVQVVGGVDV 138
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF + L E+L + G+ P+ IQ + I + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 6 TFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLY 65
Query: 482 QI 487
++
Sbjct: 66 RL 67
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +1
Query: 466 YIDSTTNRYKHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
Y +++ + +H + ALI+APTRELA QI + V G +L + GG N+ I
Sbjct: 70 YANTSVSPARHP-VRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIEPQI 125
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 54.4 bits (125), Expect = 2e-06
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+NL + +++ I GFE S IQ + + G D+I QAQ+GTGKTA F I+++
Sbjct: 73 FHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAFLIAMISD 132
Query: 485 -IDTSIRE 505
+D + E
Sbjct: 133 FLDYPLEE 140
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
VE+F+ L+EE++ + + KP+ IQ+ AI + GRD++A AQ+G+GKTA F + +
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPM 232
Query: 476 LQQI 487
+ +
Sbjct: 233 IHHL 236
>UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 625
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
Q + TFDD+ L E + + ++ P+ +Q+ AI + GRD++A AQ+G+GKTA F +
Sbjct: 291 QHINTFDDIELTEIIDNNVKLARYDVPTPVQKYAIPIIMSGRDLMACAQTGSGKTAAFLV 350
Query: 470 SILQQI 487
IL Q+
Sbjct: 351 PILNQM 356
>UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6;
Pezizomycotina|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 1029
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F ++ L L++ + FEKP+ +Q++AI +QG+DV+ +A++G+GKTA + + +L
Sbjct: 307 SFAELGLDPRLVQAVAKQSFEKPTLVQRKAIPLALQGQDVLCKAKTGSGKTAAYVLPVLS 366
Query: 482 QI 487
I
Sbjct: 367 AI 368
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +F D+ L +++ I G+E+P+ IQQ I + G DV QA +GTGKTA F I
Sbjct: 3 IPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPA 62
Query: 476 LQ 481
++
Sbjct: 63 IE 64
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 54.4 bits (125), Expect = 2e-06
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F M L LL+ I GF+ P+ IQ++A+ +QG DV+ A++G+GKTA F I ++++
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 485 IDT 493
+ T
Sbjct: 140 LKT 142
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF + L E++ + A G+ KP+ +QQRAI I GRD++ + +G+GKTA F + ++
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 103
Query: 482 Q 484
+
Sbjct: 104 R 104
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/61 (36%), Positives = 40/61 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D + +L + G++ P+ IQ+ AI + GRD++ QAQ+GTGKTA F++ ++++
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 485 I 487
+
Sbjct: 113 L 113
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D+ L + LL+ + G+ P+ IQ +AI + GRD++ AQ+GTGKTA F++ IL +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 485 I 487
+
Sbjct: 127 L 127
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F ++ L +L + F +P+ IQ AI P + G+D++A AQ+GTGKT F + +Q
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 485 IDTSIRE 505
+ T R+
Sbjct: 64 LSTEPRQ 70
Score = 37.1 bits (82), Expect = 0.36
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
ALIL PTRELA QI + ++ + + +GG N R +R
Sbjct: 75 ALILTPTRELALQINEALLQIARGTGIRAAVAVGGLNERSQLR 117
>UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1;
Marinobacter sp. ELB17|Rep: ATP-dependent RNA helicase -
Marinobacter sp. ELB17
Length = 463
Score = 54.0 bits (124), Expect = 3e-06
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ- 481
F D+NL L + I A GFE + IQ + + +D+I QAQ+GTGKTA F I+ +Q
Sbjct: 44 FSDLNLDHRLQQAIAAIGFEYCTPIQAETLPWTLACQDLIGQAQTGTGKTAAFLITAIQT 103
Query: 482 QIDTSIRECK 511
++T I + K
Sbjct: 104 MLETPIEDSK 113
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ + L E+LR + G P+ IQ+++I I GRD++ AQ+GTGKT F + +L
Sbjct: 2 TFEALGLSPEILRALNDLGHASPTPIQKQSIPHVIDGRDLLGIAQTGTGKTGGFLLPVLH 61
Query: 482 QI 487
+I
Sbjct: 62 KI 63
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 278 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 445
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +G+
Sbjct: 153 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 212
Query: 446 GKTATFSISILQQI 487
GKT FSI IL Q+
Sbjct: 213 GKTLAFSIPILMQL 226
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 278 TDWDQVVETFDDMN----LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 445
TD + TF ++ + LL+ I GF+ P+ IQ +AI + GR+++A A +G+
Sbjct: 154 TDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGS 213
Query: 446 GKTATFSISILQQI 487
GKT FSI IL Q+
Sbjct: 214 GKTLAFSIPILMQL 227
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
TF +MNL LL + KP+ +Q +AI + G D+IA AQ+G+GKT F++S+L
Sbjct: 34 TFQEMNLAPVLLPALTKMKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLL 92
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
LIL P+RE+AQQI KV + L + IGGT + Q
Sbjct: 104 LILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQ 146
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/62 (38%), Positives = 45/62 (72%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F ++ L EL + G+E+P+ IQ +AI ++G D++A+AQ+GTGKTA+F++ I++
Sbjct: 5 SFAELALCPELQFTLKNLGYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIE 64
Query: 482 QI 487
++
Sbjct: 65 KL 66
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL+LAPTRELA Q+ + G L + + GG V I++
Sbjct: 79 ALVLAPTRELAIQVADNTLEYGRDLGMRVISVYGGVPVENQIKR 122
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
F D+ L E + R I G+ P+ IQ +AI + GRDV+ AQ+GTGKTA+F++ ++
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMM 282
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/64 (39%), Positives = 43/64 (67%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F D++L L+ + +++P+ IQ +AI + G+DV+A AQ+GTGKTA F++ +L
Sbjct: 2 SFADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLH 61
Query: 482 QIDT 493
Q+ T
Sbjct: 62 QLLT 65
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL+L PTRELAQQ+ + + GG ++ E IRQ
Sbjct: 86 ALVLVPTRELAQQVHSSIEQYAYGSSVTSVMVYGGVSIGEQIRQ 129
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
+ DM L E+ + A + +PS IQ I ++GRDV+ QA++GTGKTA F I I+++
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 485 ID 490
++
Sbjct: 66 LE 67
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
FD + L L+ G+ A P+ IQ RAI + GRDV+ AQ+GTGKTA F + +L
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 485 I 487
+
Sbjct: 133 L 133
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/60 (36%), Positives = 39/60 (65%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+++ + +L+ I GF+ P+ +Q +AI + D+I +++G+GKTA F +SILQ
Sbjct: 4 TFNELGISAPILKAIDDMGFKTPTEVQSKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQ 63
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F + L + + + G++ PS IQ +AI + G+DV+A AQ+GTGKTA F++ +L+
Sbjct: 2 SFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 475 STTNRYKHS*M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
S N+ K + AL+L PTRELA Q+ + V G +L + GG + I++
Sbjct: 64 SKGNKAKAGQIRALVLTPTRELAAQVSESVETYGKYLPLRSAVVFGGVPINPQIQK 119
>UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 755
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
DT +D + FD+++L L R A G++KP+ IQ I + GRDV +A +G+GKT
Sbjct: 142 DTTFD--AKAFDELHLSRPLTRACEALGYKKPTPIQAAVIPIAMTGRDVCGRAVTGSGKT 199
Query: 455 ATFSISILQQI 487
A F + L+++
Sbjct: 200 AAFMLPQLERM 210
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
E+F MNL+ LL I G+ P+ +Q+ I + GRD++A AQ+G+GKTA F + +L
Sbjct: 261 ESFQSMNLRPLLLENIVKAGYGCPTPVQKYTIPNVMNGRDIMACAQTGSGKTAAFLLPML 320
Query: 479 QQI 487
I
Sbjct: 321 HYI 323
>UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog;
n=39; Gammaproteobacteria|Rep: ATP-dependent RNA
helicase srmB homolog - Haemophilus influenzae
Length = 439
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ +L ELL+ + G+ +P+AIQ AI ++ DV+ A +GTGKTA F + LQ
Sbjct: 6 FEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQH 65
Query: 485 I 487
+
Sbjct: 66 L 66
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 53.6 bits (123), Expect = 4e-06
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D NL L+ I+ GF + IQ + + ++G+D I +AQ+GTGKTA F ISI+ Q
Sbjct: 11 FHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQ 70
Query: 485 I 487
+
Sbjct: 71 L 71
Score = 33.5 bits (73), Expect = 4.4
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALI+APTREL QI K AL + +GG + + ++Q
Sbjct: 87 ALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQ 130
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+ + L +L G+ A GFE+PS +Q +AI G D+I QA+SGTGKT FS L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDS 124
Query: 485 I 487
+
Sbjct: 125 L 125
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVRED 633
LILAPTRE+A QI V+ A+G + +CH IGGT + +D
Sbjct: 135 LILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQD 175
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/69 (34%), Positives = 43/69 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L + +L+ + GF KP+ IQ+R I ++ D++A+AQ+G+GK+A+F + IL+
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 485 IDTSIRECK 511
+ E K
Sbjct: 63 LSRDSYEGK 71
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/70 (35%), Positives = 42/70 (60%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
V+TF+++ L LL G+ F P+ IQ AI + D+I Q++SGTGKT + I++
Sbjct: 24 VKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTGKTLIYVIAV 83
Query: 476 LQQIDTSIRE 505
+Q + +I +
Sbjct: 84 VQSFNPNINQ 93
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIAL-GDHLNAKCHACIGGTNVRED 633
A+I+ PTRELA Q+Q L + KC A IGGT+V +D
Sbjct: 96 AMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKD 137
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,219,811
Number of Sequences: 1657284
Number of extensions: 13212120
Number of successful extensions: 36851
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 34838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36793
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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