Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0750
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 3e-26
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 77 2e-14
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 73 3e-13
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 73 3e-13
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 64 7e-11
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 7e-11
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 60 2e-09
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 60 2e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 54 7e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 53 2e-07
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 52 3e-07
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 49 3e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 47 1e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 47 1e-05
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 42 6e-04
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 40 0.002
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 40 0.002
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 36 0.037
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 35 0.049
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.085
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.60
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 29 2.4
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 29 4.2
SB_39625| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 28 5.6
SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08) 28 7.4
SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 115 bits (277), Expect = 3e-26
Identities = 63/102 (61%), Positives = 72/102 (70%), Gaps = 22/102 (21%)
Frame = +2
Query: 266 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ------------ 409
G ++WD+VVE+FDDMNLKE LLRGIYAYGFEKPSAIQQRAI PC Q
Sbjct: 52 GKRQSNWDEVVESFDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQEFSPSHVCYNQL 111
Query: 410 ----------GRDVIAQAQSGTGKTATFSISILQQIDTSIRE 505
RDVIAQAQSGTGKTATF+ISILQ+IDT+ ++
Sbjct: 112 NLTKNHYVLSARDVIAQAQSGTGKTATFAISILQEIDTNYKD 153
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 633
AL+LAPTRELAQQIQKVV+ALGD+++ KCHACIGGTNVRED
Sbjct: 162 ALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVRED 202
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +2
Query: 356 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 505
GFEKPSAIQQRAI P ++GRDVIAQAQSGTGKTATFSIS+LQ IDT +RE
Sbjct: 16 GFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLRE 65
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+
Sbjct: 68 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRK 111
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/44 (72%), Positives = 41/44 (93%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL+L+PTRELA QIQKVV+ALGD+++ +CHACIGGTN+ EDIR+
Sbjct: 6 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRK 49
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 485 IDTS 496
DT+
Sbjct: 109 TDTT 112
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
AL+L PTRELA Q ++ I LG H+ A+ GGT++++DI
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDI 159
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/64 (48%), Positives = 48/64 (75%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D LK ELL GI+ GF+KPS IQ+ +I + GRD++A+A++GTGKTA + + +L++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 485 IDTS 496
DT+
Sbjct: 109 TDTT 112
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/42 (47%), Positives = 29/42 (69%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
AL+L PTRELA Q ++ I LG H+ A+ GGT++++DI
Sbjct: 118 ALVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDI 159
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 64.5 bits (150), Expect = 7e-11
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 485 ID 490
++
Sbjct: 109 LE 110
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 64.5 bits (150), Expect = 7e-11
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK ELLR I GFE PS +Q I I G D+I QA+SG GKTA F ++ LQQ
Sbjct: 49 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQ 108
Query: 485 ID 490
++
Sbjct: 109 LE 110
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDV--IAQAQSGTGKTATFSIS 472
++F+++ L L RG+Y GF KPS IQ+ A+ + V IAQ+QSGTGKTA F ++
Sbjct: 103 KSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNMIAQSQSGTGKTAAFVLT 162
Query: 473 ILQQIDTS 496
+L ++D +
Sbjct: 163 MLSRVDAT 170
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/63 (50%), Positives = 40/63 (63%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F + L LLRG+ GFEKPS IQ +AI G D+IAQA+SGTGKT FS+ L+
Sbjct: 15 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALEN 74
Query: 485 IDT 493
+ T
Sbjct: 75 VIT 77
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNA-KCHACIGGTNVRED 633
+IL PTRE+A Q++ V+ A+G H + C IGG ++ ED
Sbjct: 85 IILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEED 125
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSISILQ 481
F+D++L E LL + G++KP+ +Q+ AI P ++G RD++A AQ+G+GKTA F I IL
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAI-PIVKGKRDLMACAQTGSGKTAAFLIPILS 935
Query: 482 QI 487
+I
Sbjct: 936 RI 937
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 54.4 bits (125), Expect = 7e-08
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+F + L + L+ A G +KP+ IQ + P +QGRD I A++G+GKTA F++ ILQ
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 482 QI 487
++
Sbjct: 68 KL 69
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
A++L PTRELA QI LG + K +GG ++
Sbjct: 78 AVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDM 115
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = +2
Query: 239 LRWTSGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD 418
+RW +G+ D + +E+F D+NL EL + F+ P+ IQ +++ + GRD
Sbjct: 54 IRWKNGIH--IEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRD 111
Query: 419 VIAQAQSGTGKTATFSISILQQIDT 493
+I A++G+GKT +S+ + + T
Sbjct: 112 IIGLAETGSGKTLAYSLPLCMLLRT 136
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
VE F D + + L G+ GF P+ IQ++ I + GRDV+ A++G+GKT F I I
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 476 LQQI 487
++ +
Sbjct: 109 IETL 112
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/41 (34%), Positives = 27/41 (65%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 633
AL+++PTRELA Q +V++ +G+ + IGG +++ +
Sbjct: 125 ALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNE 165
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKTA F + +
Sbjct: 710 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPV 769
Query: 476 L 478
+
Sbjct: 770 M 770
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
A+ +APTRELA QI + C GG +V +RQ
Sbjct: 791 AMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQ 834
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/64 (31%), Positives = 42/64 (65%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +F+++ E+L+ I G+ +P+ +Q+ A+ + GRD++A AQ+G+GKTA + + +
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGKTAAYMLPV 537
Query: 476 LQQI 487
L +
Sbjct: 538 LTSL 541
Score = 35.5 bits (78), Expect = 0.037
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
AL +APTRELA+QI DH K C GG +V
Sbjct: 555 ALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSV 592
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCI-QGRDVIAQAQSGTGKTATFSISILQ 481
++ + + ++LR + GF KP+ IQ +I P + RD+I A++G+GKT F I I+Q
Sbjct: 132 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQ 191
Query: 482 QID 490
I+
Sbjct: 192 HIE 194
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
ALI+APTRELA Q++ ++ + + K A +GG
Sbjct: 221 ALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGG 255
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
D+V+ +D ++ + E R + GF P+ IQ I + G+DV A A +GTGKTA F
Sbjct: 7 DEVLNAYDSLDEEAED-RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFM 65
Query: 467 ISILQQI 487
+ IL+++
Sbjct: 66 LPILERL 72
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/55 (34%), Positives = 37/55 (67%)
Frame = +2
Query: 317 NLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
++ E+ L+GI GF + IQ ++I P ++GRD++ A++G+GKT F + +++
Sbjct: 578 DVSEKTLQGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVE 632
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/61 (32%), Positives = 39/61 (63%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ + + + + +L + G++ P+ IQ++AI +Q RD+I A++G+GKTA F+I +
Sbjct: 100 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPL 159
Query: 476 L 478
L
Sbjct: 160 L 160
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
ALILAPTRELAQQI++ ++ G L + + IGG +
Sbjct: 181 ALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGAD 217
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
+ +F++ NL E L + ++KP+ +Q+ +I I GRDV+A AQ+G+GKT
Sbjct: 133 INSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKT 185
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 254 GMDPG-TLDTD--WDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVI 424
G +P T D+D + Q V +F + L++++L+ + A +P+ IQ I I VI
Sbjct: 360 GQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVI 419
Query: 425 AQAQSGTGKTATFSISILQQI 487
AQ+G+GKT + ++ ++
Sbjct: 420 CAAQTGSGKTLAYLAPLVHRL 440
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
A I+ P RELA QI K +L H + IGG
Sbjct: 458 ACIVVPARELATQILKTAKSLCHHARFRSVGLIGG 492
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF 463
+F E+++ I + +P+ IQ +A+ + GRD+I A++G+GKTA F
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAF 571
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
LI APTREL QQI G N A GG N E
Sbjct: 594 LICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYE 632
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
L+L PTRELAQQ+Q+V ++G H + GG IR+
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRE 178
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALIL PTRELA QI + ALG + KC +GG ++
Sbjct: 35 ALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDM 72
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 413 RDVIAQAQSGTGKTATFSISILQQI 487
+DVI A++G+GKT F++ ILQ +
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQAL 26
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 583 LNAKCHACIGGTNVRED 633
++ KCHACIGGTNVRED
Sbjct: 1 MHVKCHACIGGTNVRED 17
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALIL+PTRELA Q QK + LG K +GG +V
Sbjct: 354 ALILSPTRELALQTQKFIKELGRFTGLKSSVILGGDSV 391
Score = 35.1 bits (77), Expect = 0.049
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +2
Query: 404 IQGRDVIAQAQSGTGKTATFSISILQQIDT 493
+ G+DV+A A++G+GKTA F I + +++ T
Sbjct: 316 MDGKDVVAMARTGSGKTAAFLIPMFEKLQT 345
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGK 451
F + E L + + +G+ P+ IQ + + + GRDV+ A +G+GK
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGK 246
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = +2
Query: 254 GMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQA 433
G++P + D F + ++ + + G IQ G DVI QA
Sbjct: 63 GVEPSVAQREGD-----FSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQA 117
Query: 434 QSGTGKTATFSISILQQI 487
++GTGKT +F++ +++++
Sbjct: 118 RTGTGKTLSFALPLVEKL 135
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/59 (23%), Positives = 32/59 (54%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
F + + +L+ + G KP IQ++A+ + ++ ++++GTGK+ F + +Q
Sbjct: 162 FSNFGVHPKLVEKLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSVQ 220
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 505 M*ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
M A+++ PTRELA QI + N +C GGT + E I +
Sbjct: 145 MIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAE 190
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTA 457
V+T+ ++ ++L + +EKP+ IQ +AI + GRD+IA + T + A
Sbjct: 104 VKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELA 157
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 356 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 496
G P+++Q+ ++GRDV A G+GK + + I+ QI S
Sbjct: 206 GVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKRLAYLLPIIHQITES 252
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPC-IQGRDVIAQAQS 439
++ + + ++LR + GF KP+ IQ +I P + RD+I A++
Sbjct: 74 WEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAET 119
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 159 NMSYSSERRSEDWPEDSKNGPSKDQGSYDGPPE 257
+M Y SER P D P+ D GS D P E
Sbjct: 1171 SMEYDSERHPYQAPADEMVNPNTDGGSRDNPLE 1203
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 404 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 505
+ G DV+A + SGT K + F ++++ D+ R+
Sbjct: 245 VNGSDVVANSSSGTVKRSLFLPEVMEENDSVFRD 278
>SB_39625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 902
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 189 EDWPEDSKNGPSKDQGSYDGPPEWTLGH 272
+DWPE S PSK+ S + P + L H
Sbjct: 483 DDWPEQSVLEPSKESNSEEKPVKAELKH 510
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGK 451
D + V + M+LK ++ + +KP + A P + G D +I Q+ GK
Sbjct: 1249 DVKHESVEQMTPSMSLKPDVQT--LSIPSDKPPKVSSSA--PSLMGTDEIICQSLEHAGK 1304
Query: 452 TATFSISILQQIDT 493
T SI QQ+DT
Sbjct: 1305 TPPALSSISQQLDT 1318
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 362 EKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDT 493
+KP + A P + G D +I Q++ GKT SI QQ+DT
Sbjct: 1567 DKPPKVSFSA--PSLMGTDEIICQSREHAGKTPPALSSIPQQLDT 1609
>SB_21533| Best HMM Match : TPD52 (HMM E-Value=5e-08)
Length = 829
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 352 GVYASQQFFFEVHVIEGFDNLIPVGVKC 269
GVY F H + GF N IP +C
Sbjct: 742 GVYLESNVFQNGHALVGFQNTIPASQEC 769
>SB_57823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 614
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 213 NGPSKDQGSYDGPPEWTLGHLTPT 284
NGP+ D YD PP T + PT
Sbjct: 340 NGPTSDNTDYDSPPRATPTYDAPT 363
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,685,186
Number of Sequences: 59808
Number of extensions: 426442
Number of successful extensions: 1248
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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