Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0750
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 127 8e-30
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 127 8e-30
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 115 3e-26
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 115 3e-26
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 82 3e-16
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 64 1e-10
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 63 1e-10
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 56 2e-08
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 56 2e-08
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 55 5e-08
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 55 5e-08
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 52 3e-07
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 51 8e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 50 1e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 50 1e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 50 1e-06
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 50 1e-06
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 50 1e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 50 2e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 50 2e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 50 2e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 49 3e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 49 3e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 49 3e-06
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 48 6e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 48 6e-06
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 45 5e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 42 3e-04
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 41 9e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 41 9e-04
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 41 9e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 39 0.003
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 38 0.006
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 38 0.006
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 36 0.033
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 36 0.033
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 35 0.057
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.70
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 30 1.2
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 2.8
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 3.7
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.7
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 6.5
AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 127 bits (306), Expect = 8e-30
Identities = 58/75 (77%), Positives = 69/75 (92%)
Frame = +2
Query: 266 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 445
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 446 GKTATFSISILQQID 490
GKTATFS+SILQ+ID
Sbjct: 78 GKTATFSVSILQRID 92
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL++APTRELAQQIQKV+ ALG++LN CIGGT+VR+D R+
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 127 bits (306), Expect = 8e-30
Identities = 58/75 (77%), Positives = 69/75 (92%)
Frame = +2
Query: 266 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGT 445
G ++ ++DQVVE+FDDM LKEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 446 GKTATFSISILQQID 490
GKTATFS+SILQ+ID
Sbjct: 78 GKTATFSVSILQRID 92
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
AL++APTRELAQQIQKV+ ALG++LN CIGGT+VR+D R+
Sbjct: 100 ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRK 143
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 115 bits (276), Expect = 3e-26
Identities = 53/71 (74%), Positives = 62/71 (87%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
V+ TFD M L+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 473 ILQQIDTSIRE 505
+LQ +DT +RE
Sbjct: 84 VLQSLDTQVRE 94
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRK 140
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 115 bits (276), Expect = 3e-26
Identities = 53/71 (74%), Positives = 62/71 (87%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
++ TFD M L+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSIS 83
Query: 473 ILQQIDTSIRE 505
+LQ +DT +RE
Sbjct: 84 VLQSLDTQVRE 94
Score = 77.4 bits (182), Expect = 8e-15
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALIL+PTRELA QIQKVV+ALGD++N +CHACIGGTN+ EDIR+
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRK 140
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 82.2 bits (194), Expect = 3e-16
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +2
Query: 314 MNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID 490
M LKEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 485 ID 490
++
Sbjct: 103 LE 104
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 485 ID 490
++
Sbjct: 103 LE 104
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F D LK E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 485 ID 490
++
Sbjct: 102 LE 103
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/66 (39%), Positives = 47/66 (71%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D L +LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 485 IDTSIR 502
I +++
Sbjct: 105 IQPALK 110
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
A+++ PTRELA Q ++ + L H+ K GGT++R+DI
Sbjct: 114 AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDI 155
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 257 MDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQ 436
+D +LDT V +F+ MNL ++L+ G+ P+ IQQ I + G+D+ A A
Sbjct: 137 IDGKSLDTS---VNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAA 193
Query: 437 SGTGKTATFSISILQQI 487
+GTGKTA F + IL+++
Sbjct: 194 TGTGKTAAFVLPILERM 210
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVR 627
L+L PTRELA Q+ +V L + + C GG +++
Sbjct: 223 LVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLK 260
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/71 (36%), Positives = 43/71 (60%)
Frame = +2
Query: 275 DTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKT 454
D + D ++F ++ + + L G+ KPS IQQ A+ +QG+DVI A++G+GKT
Sbjct: 36 DDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKT 95
Query: 455 ATFSISILQQI 487
F+I +LQ +
Sbjct: 96 GAFAIPVLQSL 106
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
L+L PTRELA QI + ALG + +GG ++
Sbjct: 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDM 152
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 482 QIDT 493
+D+
Sbjct: 83 NLDS 86
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/64 (37%), Positives = 42/64 (65%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
TF+ + + ++ L + F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 482 QIDT 493
+D+
Sbjct: 83 NLDS 86
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 469
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 470 SILQQIDTSI 499
++L +ID ++
Sbjct: 268 TMLCRIDVNL 277
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 624
+ LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 283 ICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 469
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 470 SILQQIDTSI 499
++L +ID ++
Sbjct: 293 TMLCRIDVNL 302
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 624
+ LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 308 ICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATFSI 469
+ +F ++ LK E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F +
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 470 SILQQIDTSI 499
++L +ID ++
Sbjct: 677 TMLCRIDVNL 686
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHL-NAKCHACIGGTNV 624
+ LAPT ELA+QI +VV +G + N K H I G N+
Sbjct: 692 ICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNM 729
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/75 (29%), Positives = 46/75 (61%)
Frame = +2
Query: 263 PGTLDTDWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSG 442
P + D++ +TF D L E +L+ I G+EK + +Q+ I ++ ++++ +A++G
Sbjct: 77 PQVDEMDFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTG 136
Query: 443 TGKTATFSISILQQI 487
+GKT F I ++Q++
Sbjct: 137 SGKTGAFLIPLVQKL 151
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 50.8 bits (116), Expect = 8e-07
Identities = 25/70 (35%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Frame = +2
Query: 281 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTA 457
D Q + F D++L E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA
Sbjct: 160 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTA 218
Query: 458 TFSISILQQI 487
F + ++ I
Sbjct: 219 AFLVPLVNAI 228
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 479 QQI 487
++
Sbjct: 401 TRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 479 QQI 487
++
Sbjct: 401 TRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + NL E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+
Sbjct: 341 KTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
Query: 479 QQI 487
++
Sbjct: 401 TRL 403
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 481
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 482 QI 487
++
Sbjct: 85 KL 86
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
AL+++PTRELA Q KVV LG +C +GG + E
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQ 481
+ + L + + I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
Query: 482 QI 487
++
Sbjct: 85 KL 86
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRE 630
AL+++PTRELA Q KVV LG +C +GG + E
Sbjct: 96 ALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 479 QQI 487
++
Sbjct: 612 ARL 614
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 479 QQI 487
++
Sbjct: 612 ARL 614
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +2
Query: 299 ETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL 478
+TF + NL E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+
Sbjct: 552 KTFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
Query: 479 QQI 487
++
Sbjct: 612 ARL 614
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 138 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 197
Query: 476 LQQI 487
+Q I
Sbjct: 198 IQHI 201
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQ 642
AL+L+PTRELA QI K N + GG N R+ + +
Sbjct: 225 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNR 269
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 122 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 181
Query: 476 LQQI 487
+Q I
Sbjct: 182 IQHI 185
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQ 642
AL+L+PTRELA QI K N + GG N R+ + +
Sbjct: 209 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNR 253
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/64 (31%), Positives = 39/64 (60%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+E F++ ++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I
Sbjct: 119 IEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPI 178
Query: 476 LQQI 487
+Q I
Sbjct: 179 IQHI 182
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG-TNVREDIRQ 642
AL+L+PTRELA QI K N + GG N R+ + +
Sbjct: 206 ALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNR 250
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/66 (30%), Positives = 40/66 (60%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 470 SILQQI 487
I+ ++
Sbjct: 355 PIMSRL 360
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/66 (30%), Positives = 40/66 (60%)
Frame = +2
Query: 290 QVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
Q ++F D ++ + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F +
Sbjct: 295 QPCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLL 354
Query: 470 SILQQI 487
I+ ++
Sbjct: 355 PIMSRL 360
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/61 (32%), Positives = 39/61 (63%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 475
+ +++ +E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +
Sbjct: 300 LRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPL 359
Query: 476 L 478
L
Sbjct: 360 L 360
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVRED 633
A+I+APTRELAQQI++ G L K + IGG + RED
Sbjct: 381 AIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGAS-RED 420
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +2
Query: 332 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F + ++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE 128
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/69 (28%), Positives = 41/69 (59%)
Frame = +2
Query: 281 DWDQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTAT 460
D + ++T+ + +++ + + + KP++IQ +AI + GRDVI A++G+GKT
Sbjct: 298 DCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLA 357
Query: 461 FSISILQQI 487
F + + + I
Sbjct: 358 FLLPMFRHI 366
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDI 636
A+ILAPTRELA Q K L K GG + E I
Sbjct: 380 AVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQI 421
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +2
Query: 293 VVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
++ F D ++ LL + +PS IQ ++I + R+V+A A +G+GKT F++
Sbjct: 124 IILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALP 183
Query: 473 ILQQI 487
++ +I
Sbjct: 184 VIDEI 188
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 356 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 505
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQ 152
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +1
Query: 514 LILAPTRELAQQIQ 555
L+L+PTRELAQQI+
Sbjct: 167 LVLSPTRELAQQIE 180
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 33/59 (55%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
F++ + EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 305 FDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ 484
F+D L L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 485 I 487
+
Sbjct: 138 L 138
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNV 624
ALI++PTRELA Q + A+G H C IGG++V
Sbjct: 151 ALIISPTRELALQTFSTINAVGAHHGFSCGLVIGGSDV 188
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +2
Query: 302 TFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF 463
+F + + L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA +
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAY 319
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 320 LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI 487
L E+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 162 LPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 218
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
ALI+APTREL QI K + AL + +GG
Sbjct: 238 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALIL PTRELA QI + ALG + KC +GG ++ R+
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARE 203
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
+ + F + + + + + + + +Q I ++G D++ A++GTGKT F+
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 467 ISILQQI 487
I ILQ++
Sbjct: 145 IPILQKL 151
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/44 (45%), Positives = 26/44 (59%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQ 642
ALIL PTRELA QI + ALG + KC +GG ++ R+
Sbjct: 160 ALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARE 203
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/67 (23%), Positives = 35/67 (52%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
+ + F + + + + + + + +Q I ++G D++ A++GTGKT F+
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 467 ISILQQI 487
I ILQ++
Sbjct: 145 IPILQKL 151
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 296 VETFDDMNLKEELLRGIYAY-GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSIS 472
+ +F +M + LL + G P+AIQ + I + GRD+I A +G+GKT TF +
Sbjct: 188 IGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLP 247
Query: 473 IL 478
++
Sbjct: 248 LV 249
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHL------NAKCHACIGGTNVREDIR 639
LI+ P+RELA+QI ++I + D L + CIGG + E +
Sbjct: 270 LIIVPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAK 317
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 353 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI 487
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHI 191
Score = 34.3 bits (75), Expect = 0.075
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +1
Query: 514 LILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTN 621
L+L PTRELAQQ+Q+V I L K GG +
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGAS 241
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 302 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 302 TFDDMN-LKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSI 469
+FD L ++L + +P+ IQ+ + P + G DV+A A +G+GKT F I
Sbjct: 736 SFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 287 DQVVETFDDMNLKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFS 466
D + ++ + L +L + + IQ I + G DV+ QA++ GKTA F
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 467 ISILQQI 487
+ I+ +I
Sbjct: 437 LPIIDKI 443
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVV 564
ALILAPTRELA QI + +
Sbjct: 462 ALILAPTRELAAQIHEAL 479
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 344 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI 487
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 51
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGG 615
ALI+APTREL QI K + AL + +GG
Sbjct: 71 ALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 34.7 bits (76), Expect = 0.057
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 511 ALILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIR 639
ALIL+P+REL QI V+ + LN GG V ++I+
Sbjct: 83 ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGGQKVDKNIK 125
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 371 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+A+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 255 PEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 163
P + + D FWN L+N LTF Q +KT
Sbjct: 340 PAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 377 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 481
+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 53
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 419 VIAQAQSGTGKTATFSISILQQIDTSIREC 508
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 231 DPSMAHFWNPLANLLTFFQTNKT 163
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 371 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 505
+A+QQ++I R ++ A +G GKT F ++ I+ ++RE
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRE 157
>AC024857-3|AAK31568.6| 611|Caenorhabditis elegans Hypothetical
protein Y71G12A.2 protein.
Length = 611
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -1
Query: 642 LANIFTDIGATNASMAFSIQVITKSYHHLLNLLGQLSCGSQDQSLH 505
L N D T S FS+Q I+KS H L + L C S+H
Sbjct: 264 LLNTKIDDRPTLISGGFSVQRISKSEAHYLGMRNYLLCQQIIMSIH 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,436
Number of Sequences: 27780
Number of extensions: 313298
Number of successful extensions: 913
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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