Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0748
         (779 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   145   3e-35
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    34   0.099
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    34   0.13 
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U80453-3|AAV58885.1|  434|Caenorhabditis elegans Serine palmitoy...    29   3.7  
U80453-2|AAK31446.1|  458|Caenorhabditis elegans Serine palmitoy...    29   3.7  
AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    28   8.6  
Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  145 bits (352), Expect = 3e-35
 Identities = 61/84 (72%), Positives = 70/84 (83%)
 Frame = +2

Query: 509 VIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPV 688
           VI+S ILERDE+  D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME   GHPV
Sbjct: 163 VIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPV 222

Query: 689 FATRYGKIAVNICFGRHHVLNWMM 760
           F T+YG+I +NIC+GRHH  NWMM
Sbjct: 223 FETKYGRIGINICYGRHHPQNWMM 246



 Score = 94.3 bits (224), Expect = 9e-20
 Identities = 43/82 (52%), Positives = 54/82 (65%)
 Frame = +3

Query: 258 VQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWC 437
           +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPFAFCTRE+ PW 
Sbjct: 79  IQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFCTRERLPWT 138

Query: 438 EFAESAEDGPTTTFLRELAIKY 503
           EFAES   GPTT FL +LA+K+
Sbjct: 139 EFAESVYTGPTTQFLSKLAVKH 160


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 34.3 bits (75), Expect = 0.099
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 473 DLPSGTRHQVRNVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 613
           DLP+G   +  N+++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 211 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHTGKVR 259


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +2

Query: 473 DLPSGTRHQVRNVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 613
           DLP+G   +  N+++  I+E  E  +  LWN  +  ++SD  +  GK R
Sbjct: 283 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHSGKVR 331


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -3

Query: 612 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITLRT*WRVPEGRSWSARLQLIR 445
           +C P+TF ++   T +       F+++  IE+T I + T  +  EG    A+  +IR
Sbjct: 75  KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTIIR 131


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/49 (30%), Positives = 28/49 (57%)
 Frame = -2

Query: 487 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 341
           SR K+    +S+   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


>U80453-3|AAV58885.1|  434|Caenorhabditis elegans Serine palmitoyl
           transferase familyprotein 1, isoform b protein.
          Length = 434

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 763 QHHPVQDVVPSEADVHRDLAVSGRKY-RMAGVTFHVVVGFVKIAD 632
           Q HPV +   ++  + +D+++ G KY  MA   F   +G  +I D
Sbjct: 39  QDHPVLNPKYADGKMTKDVSIDGEKYLNMASTNFLSFIGVKRIED 83


>U80453-2|AAK31446.1|  458|Caenorhabditis elegans Serine palmitoyl
           transferase familyprotein 1, isoform a protein.
          Length = 458

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 763 QHHPVQDVVPSEADVHRDLAVSGRKY-RMAGVTFHVVVGFVKIAD 632
           Q HPV +   ++  + +D+++ G KY  MA   F   +G  +I D
Sbjct: 63  QDHPVLNPKYADGKMTKDVSIDGEKYLNMASTNFLSFIGVKRIED 107


>AF038612-1|AAB92043.1|  348|Caenorhabditis elegans Hypothetical
           protein F13B6.1 protein.
          Length = 348

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 661 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 569
           V+ GFV + DS+++V     D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 309 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 443
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 309 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 443
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>AF016416-8|AAB65271.1|  388|Caenorhabditis elegans Hypothetical
           protein F29A7.1 protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +2

Query: 560 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 664
           WN  + + D   ++   +  H+ R GD+   NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300


>Z75544-2|CAC42316.1|  480|Caenorhabditis elegans Hypothetical
           protein K02A11.1b protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 336 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 491
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +3

Query: 336 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 491
           I+ +  Q G N++      NMP+  C  E+      +E A  G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189


>Z68134-4|CAA92224.1|  567|Caenorhabditis elegans Hypothetical
           protein T27A8.5 protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +2

Query: 473 DLPSGTRHQVRNVIVSSILERDEKHSDILWNTAV--VISDTGNVIGK 607
           DLP G   +  +VI+  I+E  +  S  LWN  +   ++D  + IG+
Sbjct: 129 DLPIGLMQKSTHVILEGIVECSDTPSTALWNALIPMFMTDIEHHIGR 175


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,407,707
Number of Sequences: 27780
Number of extensions: 402672
Number of successful extensions: 1201
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)