Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0743
(687 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 26 0.29
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 26 0.29
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 24 1.2
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 24 1.2
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 24 1.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.8
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 22 6.3
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 22 6.3
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 22 6.3
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 8.3
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 8.3
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 21 8.3
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 26.2 bits (55), Expect = 0.29
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = -3
Query: 187 LKLASAAGTTEILLWLRNRRVMFSRENKPGI 95
L L+ + T++ +W +NRR + ++N PG+
Sbjct: 41 LALSLSLTETQVKIWFQNRRTKWKKQN-PGL 70
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 26.2 bits (55), Expect = 0.29
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -3
Query: 187 LKLASAAGTTE--ILLWLRNRRVMFSRENK 104
+++A A TE I +W +NRR+ + +ENK
Sbjct: 301 IEIAHALCLTERQIKIWFQNRRMKWKKENK 330
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -3
Query: 187 LKLASAAGTTE--ILLWLRNRRVMFSREN 107
+++A A TE I +W +NRR+ + +EN
Sbjct: 39 IEIAHALCLTERQIKIWFQNRRMKWKKEN 67
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = -3
Query: 187 LKLASAAGTTE--ILLWLRNRRVMFSRENK 104
+++A A TE I +W +NRR+ + +E+K
Sbjct: 39 IEIAHALCLTERQIKIWFQNRRMKWKKEHK 68
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -1
Query: 324 GKEPKLLGKLYSLFNETLRILNLVVMIS*LEALECCYWPSLEFLSC 187
G P L ++ F++ + + +L +E L YW ++EF C
Sbjct: 342 GHMPLLADPSFAQFSQEIGLASLGASDEEIEKLSTIYWFTVEFGLC 387
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 4.8
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 532 LARLRELHLQGNRLVVLPPEIGTLDLASNKSVLRLEGNFW 651
L L L L GNRLV P + + L + L L N W
Sbjct: 889 LRSLEILRLSGNRLVTFP--VWQVTLNARLVELSLGSNPW 926
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +2
Query: 500 DLIKFPGSWGSWRASASCTCRGTASSCCRR 589
DL+ F G +A+C G A C +
Sbjct: 47 DLLSFKGQVNDSACAANCLSLGKAGGHCEK 76
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +2
Query: 500 DLIKFPGSWGSWRASASCTCRGTASSCCRR 589
DL+ F G +A+C G A C +
Sbjct: 47 DLLSFKGQVNDSACAANCLSLGKAGGHCEK 76
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 473 DSSNFQFQVVEIQNHCHPN 417
D+S+ Q++E +HCH N
Sbjct: 10 DASHCIQQILESVHHCHHN 28
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 21.4 bits (43), Expect = 8.3
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 187 LKLASAAGTTE--ILLWLRNRRVMFSRE 110
+++A A TE I +W +NRR+ +E
Sbjct: 39 IEIAHALCLTERQIKIWFQNRRMKLKKE 66
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +2
Query: 500 DLIKFPGSWGSWRASASCTCRGTASSCCRR 589
DL+ F G +A+C G A C +
Sbjct: 22 DLLSFKGQVNDSACAANCHSLGKAGGHCEK 51
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 21.4 bits (43), Expect = 8.3
Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 184 KLASAAGTTE--ILLWLRNRRVMFSRENK 104
+LA++ G T+ + +W +NRR + + K
Sbjct: 13 ELAASLGLTQTQVKIWFQNRRSKYKKMMK 41
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,051
Number of Sequences: 438
Number of extensions: 3530
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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