Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0742
         (779 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068479-1|AAH68479.1|  689|Homo sapiens hypothetical protein FL...    47   9e-05
AK074981-1|BAC11331.1|  486|Homo sapiens protein ( Homo sapiens ...    47   9e-05
AK000261-1|BAA91038.1|  431|Homo sapiens protein ( Homo sapiens ...    47   9e-05
AC013472-3|AAY14654.1|  431|Homo sapiens unknown protein.              47   9e-05
AM261745-1|CAK12620.1|  362|Homo sapiens MHC class I antigen pro...    31   6.1  

>BC068479-1|AAH68479.1|  689|Homo sapiens hypothetical protein
           FLJ20254 protein.
          Length = 689

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +3

Query: 12  NFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLS 191
           +F  S TG+L +  G L  SQQA  K  S S +GY WL    P++ +  + + RP  QL+
Sbjct: 506 SFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGYSWLGETLPLWGSHLLTVVRPSLQLA 565


>AK074981-1|BAC11331.1|  486|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90500 fis, clone NT2RP3004025. ).
          Length = 486

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +3

Query: 12  NFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLS 191
           +F  S TG+L +  G L  SQQA  K  S S +GY WL    P++ +  + + RP  QL+
Sbjct: 303 SFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGYSWLGETLPLWGSHLLTVVRPSLQLA 362


>AK000261-1|BAA91038.1|  431|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20254 fis, clone COLF6926. ).
          Length = 431

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +3

Query: 12  NFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLS 191
           +F  S TG+L +  G L  SQQA  K  S S +GY WL    P++ +  + + RP  QL+
Sbjct: 248 SFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGYSWLGETLPLWGSHLLTVVRPSLQLA 307


>AC013472-3|AAY14654.1|  431|Homo sapiens unknown protein.
          Length = 431

 Score = 46.8 bits (106), Expect = 9e-05
 Identities = 23/60 (38%), Positives = 33/60 (55%)
 Frame = +3

Query: 12  NFPKSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLS 191
           +F  S TG+L +  G L  SQQA  K  S S +GY WL    P++ +  + + RP  QL+
Sbjct: 248 SFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGYSWLGETLPLWGSHLLTVVRPSLQLA 307


>AM261745-1|CAK12620.1|  362|Homo sapiens MHC class I antigen
           protein.
          Length = 362

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 120 WLETNAPVYYAQTVEICRPYTQLSKDAFFIALK 218
           W+E   P Y+ +  +IC+  TQ  ++   IAL+
Sbjct: 75  WIEQEGPEYWDRNTQICKTNTQTDRENLRIALR 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,209,413
Number of Sequences: 237096
Number of extensions: 2456777
Number of successful extensions: 6122
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6122
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)