Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0742
(779 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical ... 31 1.2
AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like... 31 1.2
Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical pr... 28 8.6
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 28 8.6
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 28 8.6
U80452-13|AAB37850.1| 139|Caenorhabditis elegans Hypothetical p... 28 8.6
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 28 8.6
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 28 8.6
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein. 28 8.6
AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical ... 28 8.6
>AL021466-1|CAA16282.1| 308|Caenorhabditis elegans Hypothetical
protein VF36H2L.1 protein.
Length = 308
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 81 WQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFFIALKKA 224
W +L S+ +L L T P + ++ +C +LS+ A+F+ LKKA
Sbjct: 42 WLVSLLFSSLAWLGLSTVLPDTFLLSLTVCIIAQELSRVAYFMLLKKA 89
>AF068718-3|AAO21430.1| 82|Caenorhabditis elegans Cystatin-like
protease inhibitorprotein 1, isoform b protein.
Length = 82
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 27 TTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAPVYYAQTVEICRPYTQLSKDAFF 206
T G + +D E+S +AW+ + + N P YYA +++C PY + ++D
Sbjct: 23 TGGSVEQDASQKEYSDKAWKAVKGINDQA----SNNGPYYYAP-IKVCDPYERGAEDRTA 77
Query: 207 IA 212
+A
Sbjct: 78 LA 79
>Z93391-9|CAB07683.2| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 448 ILKYLWGPITNKNFSNQIVSCDLIIVTRVLFESAPGRRCIALNVVYK--TRSILFNGFNN 275
+ K+LW ITN + + I + I ++ V + S P + N+ + + F GFN
Sbjct: 332 VTKWLWQNITNCDLTVVIALYEHIWISYVYYPSVPSEPGWSCNICFDDGEKYFFFAGFNL 391
Query: 274 D 272
D
Sbjct: 392 D 392
>Z81498-4|CAL63995.1| 392|Caenorhabditis elegans Hypothetical
protein W04G5.7 protein.
Length = 392
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 448 ILKYLWGPITNKNFSNQIVSCDLIIVTRVLFESAPGRRCIALNVVYK--TRSILFNGFNN 275
+ K+LW ITN + + I + I ++ V + S P + N+ + + F GFN
Sbjct: 332 VTKWLWQNITNCDLTVVIALYEHIWISYVYYPSVPSEPGWSCNICFDDGEKYFFFAGFNL 391
Query: 274 D 272
D
Sbjct: 392 D 392
>Z70783-1|CAA94852.2| 765|Caenorhabditis elegans Hypothetical
protein ZK856.1 protein.
Length = 765
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 21 KSTTGKLFKDLGILEHSQQAWQKTLSTSARGYLWLETNAP 140
K G L +LG+LE+ A +K R +LE N+P
Sbjct: 200 KKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSP 239
>Z83113-1|CAB05543.1| 733|Caenorhabditis elegans Hypothetical
protein K08H10.1 protein.
Length = 733
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 314 DNVQSYASTAWSGLKKYSSDYYQITTDYLV-TKVFVGDWAPEVLQNKTQSALNMTKSQVS 490
DN + A AW K +SD + T D K GD A + ++K++S ++S
Sbjct: 632 DNTKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGD-AADSAKDKSKSITETIGDKIS 690
Query: 491 SYY 499
Y
Sbjct: 691 GAY 693
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 272 VVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQNK 451
VV T P +D+++ A G K Y T D +V+ FV D +
Sbjct: 248 VVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY---TEDQVVSTDFVSDTNSSIFDAG 304
Query: 452 TQSALNMTKSQVSSYYVWFGNRFTYTQRYLEL 547
+LN ++ S W+ N F Y+ R ++L
Sbjct: 305 ASISLNPHFVKLVS---WYDNEFGYSNRVVDL 333
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 272 VVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQNK 451
VV T P +D+++ A G K Y T D +V+ FV D +
Sbjct: 248 VVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY---TEDQVVSTDFVSDTNSSIFDAG 304
Query: 452 TQSALNMTKSQVSSYYVWFGNRFTYTQRYLEL 547
+LN ++ S W+ N F Y+ R ++L
Sbjct: 305 ASISLNPHFVKLVS---WYDNEFGYSNRVVDL 333
>U80452-13|AAB37850.1| 139|Caenorhabditis elegans Hypothetical
protein C16C8.8 protein.
Length = 139
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +2
Query: 323 QSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQN 448
++ A+T + L + D + D+++ K F+GDWA ++N
Sbjct: 90 RNIATTVFFPLSPHGYDIPFKSADFILKKRFMGDWAITSMEN 131
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 272 VVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQNK 451
VV T P +D+++ A G K Y T D +V+ FV D +
Sbjct: 248 VVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY---TEDQVVSTDFVSDTNSSIFDAG 304
Query: 452 TQSALNMTKSQVSSYYVWFGNRFTYTQRYLEL 547
+LN ++ S W+ N F Y+ R ++L
Sbjct: 305 ASISLNPHFVKLVS---WYDNEFGYSNRVVDL 333
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 272 VVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDYYQITTDYLVTKVFVGDWAPEVLQNK 451
VV T P +D+++ A G K Y T D +V+ FV D +
Sbjct: 248 VVDLTARLEKPASLDDIKKVIKAAADGPMKGILAY---TEDQVVSTDFVSDTNSSIFDAG 304
Query: 452 TQSALNMTKSQVSSYYVWFGNRFTYTQRYLEL 547
+LN ++ S W+ N F Y+ R ++L
Sbjct: 305 ASISLNPHFVKLVS---WYDNEFGYSNRVVDL 333
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/75 (20%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 248 RLLVEKTPVVIKTIEEYAPGLVDNVQSYASTAWSGLKKYSSDY-YQITTDYLVTKVFVGD 424
R+ ++ + K E L DN+Q+ WS + + + Y ++L+T +
Sbjct: 99 RVTFDQCLFISKNYAEKRAQLADNIQNLTDDLWSKVPELNKRLDYANYVNFLITYTEMFH 158
Query: 425 WAPEVLQNKTQSALN 469
W V++ + Q+ ++
Sbjct: 159 WIGTVMETEYQNGIH 173
>AF016513-1|AAB69446.1| 733|Caenorhabditis elegans Ce-LEA protein.
Length = 733
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 314 DNVQSYASTAWSGLKKYSSDYYQITTDYLV-TKVFVGDWAPEVLQNKTQSALNMTKSQVS 490
DN + A AW K +SD + T D K GD A + ++K++S ++S
Sbjct: 632 DNTKDKAGNAWDSTKDKASDAWDTTKDKASDAKESAGD-AADSAKDKSKSITETIGDKIS 690
Query: 491 SYY 499
Y
Sbjct: 691 GAY 693
>AC024801-9|AAF59653.3| 791|Caenorhabditis elegans Hypothetical
protein Y50D7A.1 protein.
Length = 791
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 370 TRVLFESAP--GRRCIALNVVYKTRSILFNGFNNDRR 266
+RV+ SAP C A V + T+ ILF G +N RR
Sbjct: 183 SRVIISSAPYPSAMCYASLVTWGTQLILFGGNDNRRR 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,499,265
Number of Sequences: 27780
Number of extensions: 399049
Number of successful extensions: 883
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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