Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0741
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 140 3e-34
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 39 9e-04
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 38 0.002
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 37 0.003
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 36 0.005
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 35 0.014
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 35 0.014
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 34 0.019
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 33 0.043
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 31 0.23
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 31 0.23
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 30 0.30
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 30 0.40
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.53
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 29 0.70
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 29 0.92
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 0.92
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 27 2.8
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 27 2.8
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 27 2.8
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 27 3.7
SPAC323.05c |||S-adenosylmethionine-dependent methyltransferase ... 27 3.7
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 26 6.5
SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase |Schizosac... 26 6.5
SPBC3B9.03 |||signal recognition particle receptor alpha subunit... 26 6.5
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 25 8.6
SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces ... 25 8.6
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 25 8.6
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 140 bits (338), Expect = 3e-34
Identities = 60/79 (75%), Positives = 73/79 (92%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPDWQEILAHFRGSELQNYFTKILED 181
G+VLGLVG NGIGKSTALKIL+GK KPNLGRY +PPDW E++ +FRGSELQN+FTK++ED
Sbjct: 103 GQVLGLVGTNGIGKSTALKILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVED 162
Query: 182 DLKALIKPQYVDQIPKAVK 238
++KALIKPQYVD IP+A+K
Sbjct: 163 NIKALIKPQYVDHIPRAIK 181
Score = 120 bits (289), Expect = 2e-28
Identities = 52/78 (66%), Positives = 64/78 (82%)
Frame = +3
Query: 510 EHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFK 689
EHDLSVLDYLSDF+C LYGVP YGVVT+P+SVREGINIFLDG +PTEN+RFR+E+L F+
Sbjct: 276 EHDLSVLDYLSDFVCVLYGVPSMYGVVTLPYSVREGINIFLDGHIPTENLRFRSEALTFR 335
Query: 690 VAESATEEEIKRMNHYEY 743
+A+++ E R Y Y
Sbjct: 336 LADASDEITADRTAEYNY 353
Score = 87.8 bits (208), Expect = 1e-18
Identities = 40/67 (59%), Positives = 50/67 (74%)
Frame = +1
Query: 307 DLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQRLNAARTIRSLIH 486
DL ++ +RE+ LSGGELQRFA A V Q D++MFDEPSSYLD+KQRL A R IRSL+
Sbjct: 208 DLQNLLNREVGHLSGGELQRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGRVIRSLLA 267
Query: 487 PDKFIIV 507
++IV
Sbjct: 268 TTNYVIV 274
Score = 67.7 bits (158), Expect = 2e-12
Identities = 31/69 (44%), Positives = 46/69 (66%)
Frame = +1
Query: 277 KNQSVICRMLDLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQRLN 456
K QS +C+ L + +I D+E+ LSGGELQR A + D+++ DEPS+YLD +QR+
Sbjct: 434 KFQSEVCKPLSIDNIIDQEVLNLSGGELQRVAICLALGMPADVYLIDEPSAYLDSEQRII 493
Query: 457 AARTIRSLI 483
A++ IR I
Sbjct: 494 ASKVIRRFI 502
Score = 28.7 bits (61), Expect = 0.92
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +3
Query: 510 EHDLSVLDYLSDFICCLYGVPGAYGVVTMPFSVREGINIFLDGFVPTENMRFRTESLVFK 689
EHD + YL+D + G P P S+ G+N FL T T
Sbjct: 513 EHDFIMATYLADRVILFEGQPSRDARCNPPQSLLTGMNTFLKNLDVTFRRDPNTLRPRIN 572
Query: 690 VAESATEEEIKRMNHY 737
+S ++E K +Y
Sbjct: 573 KFDSQMDQEQKNAGNY 588
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 5 EVLGLVGQNGIGKSTALKILA 67
E++ L+G+NG GK+T K +A
Sbjct: 376 EIIVLLGENGTGKTTFCKWMA 396
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 38.7 bits (86), Expect = 9e-04
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 343 LSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQRLNAARTIRSLI 483
+SGGE QR A + + ++N +I FDE +S LD R I LI
Sbjct: 580 ISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLI 626
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 37.9 bits (84), Expect = 0.002
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +1
Query: 313 SHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDV 441
+ +++ +A+LSGG + A +Q DI + DEP+++LDV
Sbjct: 553 AEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHLDV 595
Score = 31.5 bits (68), Expect = 0.13
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 11 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPPD 112
+ ++G NG GKST +K+L G+ P G+ P+
Sbjct: 722 VAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPN 755
Score = 29.1 bits (62), Expect = 0.70
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 334 IAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLD 438
I++LSGG+ + A N + + DEP+++LD
Sbjct: 908 ISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGKQKPN 85
G G+VG NG GKST L+ + + N
Sbjct: 470 GHRYGVVGHNGCGKSTLLRAIGDYKVEN 497
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 346 SGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQRLNAARTIRSL 480
SGG++QR A A ++N + + DE +S LD K L +TI++L
Sbjct: 1237 SGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNL 1281
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 337 AALSGGELQRFACAMVCIQNGDIFMFDEPSSYLD 438
A+LSGG+ QR A A +++ +I + DEP+S LD
Sbjct: 569 ASLSGGQQQRIALARALLRDTEILILDEPTSALD 602
Score = 32.7 bits (71), Expect = 0.057
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGKQKPNLGR-YTDPPDWQEILAHFRGSEL 151
GE++ ++G +G GKST + +L P G Y D +EI H GS +
Sbjct: 462 GELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTI 512
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 328 REIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQRLNAARTIR 474
+++ LSGG+ R A A + +QN I + DEP+++LD++ R ++
Sbjct: 632 QKMITLSGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVK 680
Score = 30.7 bits (66), Expect = 0.23
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGKQ 76
G GL G+NGIGKST L+ L+ ++
Sbjct: 208 GRRYGLTGRNGIGKSTLLRALSRRE 232
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 241 NCRSTLDK-KDEMKNQSVICRMLDLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFD 417
N S +D + E + +++ + ++ SGG R + A D+ + D
Sbjct: 320 NKLSEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLD 379
Query: 418 EPSSYLDV 441
EPS+ LDV
Sbjct: 380 EPSNMLDV 387
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 34.7 bits (76), Expect = 0.014
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 307 DLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDV 441
DL++I ++LSGG+ QR + A N ++++FD+ S LDV
Sbjct: 696 DLTYIHSNG-SSLSGGQKQRVSLARALYSNAEVYIFDDIFSALDV 739
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 34.7 bits (76), Expect = 0.014
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 334 IAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDV 441
I +LSGG + A +N DI + DEP+++LDV
Sbjct: 546 IGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLDV 581
Score = 33.1 bits (72), Expect = 0.043
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 11 LGLVGQNGIGKSTALKILAGKQKPNLG 91
+ ++G NG GKST +K+L G+ P +G
Sbjct: 703 IAVIGPNGAGKSTLIKVLTGELLPTVG 729
Score = 29.1 bits (62), Expect = 0.70
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 304 LDLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLD 438
LD + I LSGG+ + A + + DEP++YLD
Sbjct: 891 LDAELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLD 935
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 301 MLDLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQR 450
M LSH+ + LS G+ +R A +Q + + DEP + LDV R
Sbjct: 135 MTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSR 184
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 SVICRMLDLSHIRDREIAALSGGELQRFAC-AMVCIQNGDIFMFDEPSSYLDVKQRLNAA 462
S I +L I+D+ ++++S G +QRF ++ + + DEP +D K A
Sbjct: 387 SSILEEFELKDIKDKPLSSISVG-MQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAH 445
Query: 463 RTIRSLIHPDKFIIV 507
+ + P + +++
Sbjct: 446 NYLNEKLSPSQAMVI 460
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 33.1 bits (72), Expect = 0.043
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 17 LVGQNGIGKSTALKILAGKQKPNLG 91
LVG NG GKST LK+L+GK G
Sbjct: 35 LVGANGAGKSTLLKLLSGKSLAKAG 59
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 30.7 bits (66), Expect = 0.23
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 11 LGLVGQNGIGKSTALKILAGKQKPNLG 91
+ LVG NG GK+T +K++ K +P+ G
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTG 649
Score = 29.5 bits (63), Expect = 0.53
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 343 LSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVK 444
LSGG R A A + + M DEP+++LD++
Sbjct: 421 LSGGWRMRIALARILFIKPTLMMLDEPTNHLDLE 454
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 30.7 bits (66), Expect = 0.23
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGKQKPNLGRYT-DPPDWQEI-LAHFRGS 145
G+V+ LVG++G GKST ++IL N G T D D + + L+ R S
Sbjct: 610 GKVIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQDIRNVTLSSLRSS 659
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 30.3 bits (65), Expect = 0.30
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 733 WFILFISSSVADSATLNTSDSVRNLMFSVGTNPSRNMFIPSLTEKGIVTTPYAPG 569
WF+L I+ LN S ++N+ FS GTN R + ++ I Y PG
Sbjct: 355 WFLLDIAFY---GVNLNQSVILKNIGFSTGTNEYRTLMKNAIGNLIIAVAGYVPG 406
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 29.9 bits (64), Expect = 0.40
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 331 EIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDV 441
EI LS G R A + ++ I + DEP+++LD+
Sbjct: 509 EIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLDI 545
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +2
Query: 11 LGLVGQNGIGKSTALKILAGKQKP---NLGRYT 100
+ +VG+NG GKST L ++ G P N+ RY+
Sbjct: 419 VAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYS 451
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGK 73
G+ GL+G NG GKST L+ +A +
Sbjct: 101 GQRYGLLGDNGSGKSTFLESVAAR 124
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 29.5 bits (63), Expect = 0.53
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -3
Query: 733 WFILFISSSVADSATLNTSDSVRNLMFSVGTNPSRNMFIPSLTEKGIVTTPYAPG 569
WF+L I+ LN S ++N+ FS GTN R + ++ I Y PG
Sbjct: 356 WFLLDIAFY---GVNLNQSVILKNIGFSSGTNEYRTLMKNAIGNLIIAVAGYVPG 407
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 29.1 bits (62), Expect = 0.70
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 337 AALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDVKQRLNAARTIRSLIHPDKFI 501
A+LSGG+ R + A DI++ D+ S +D Q + + I++L P+ F+
Sbjct: 702 ASLSGGQKSRISLARAIYSQADIYLLDDVLSSVD--QHV-SRDLIKNLFGPEGFL 753
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 28.7 bits (61), Expect = 0.92
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 307 DLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLDV 441
DL+ I ++ + LSGG+ QR A A I + D+ S LD+
Sbjct: 729 DLTEIGEKGVT-LSGGQKQRIALARAVYSPTSIVLMDDVFSALDI 772
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 17 LVGQNGIGKSTALKILAGKQKPNLGRYTDP 106
++G G GKS+ + L G+ N G Y P
Sbjct: 646 VIGPTGSGKSSLISALLGELSLNKGSYNLP 675
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 0.92
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Frame = +2
Query: 5 EVLGLVGQNGIGKSTALKILAG--KQKP---NLGRYTDPPD----WQEILAHFRGSELQN 157
E L LVG+ G GK+T +++LAG QK N+ + T+ D ++ I A G L
Sbjct: 468 EPLLLVGETGTGKTTTIQLLAGLLGQKVTVINMSQQTESSDMLGGYKPINASTLGLPLHE 527
Query: 158 YFTKILEDDLKALIKPQYV 214
F I E + +++
Sbjct: 528 RFIDIFEQTFSSKKNAKFI 546
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 2.8
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 359 CSVLHVPWCAFKMGIYLCL 415
CS V W ++ +GI+LCL
Sbjct: 26 CSTRGVQWASWNLGIFLCL 44
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 27.1 bits (57), Expect = 2.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 400 DIFMFDEPSSYLDVKQRLNAARTIRSLIHPDKFII 504
D+F+ EP+ +D+++RLN+ SLI P K I+
Sbjct: 484 DVFVDCEPT--IDLRRRLNSLVNACSLIQPFKLIL 516
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 27.1 bits (57), Expect = 2.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 11 LGLVGQNGIGKSTALKILAGKQKPNLGRYTDPP 109
+G+VG IGKST +IL K NLG + P
Sbjct: 48 IGIVGMPNIGKSTLFQILT---KTNLGNPANYP 77
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 367 FACAMVCIQNGDIFMFDEPSSYLDVKQRLNAARTIRSLIHPDKFIIVGNMTCQCWIISQI 546
FA + GD + S R+N+ + + L + ++ I GN T +C I Q
Sbjct: 392 FADYLETFLQGDWLSSPQYKSICQAILRMNSTKALACLDYLNENIFTGNQTMKCLEIHQE 451
Query: 547 LS 552
LS
Sbjct: 452 LS 453
>SPAC323.05c |||S-adenosylmethionine-dependent methyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 232 CKGNCRSTLDKKDEMKNQSVICRMLDLSH--IRDREIAALSGGELQR 366
C C S+ K +KN+ ++ M D+S+ R +I AL+ EL +
Sbjct: 55 CGSGCASSFLKSGILKNKPIVHFMSDISNSACRASKITALNNRELYK 101
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 307 DLSHIRDREIAALSGGELQRFACAMVCIQNGDIFMFDEPSSYLD 438
D + + ++ I+ LSGG+ R + A DI++ D+ S +D
Sbjct: 695 DQTEVGEKGIS-LSGGQKARISLARAVYSRSDIYLLDDILSAVD 737
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKILAGKQKPNLG 91
GE+ +VG+ G+GKS+ L+ G + + G
Sbjct: 609 GELCCIVGKVGMGKSSLLEACLGNMQKHSG 638
>SPBC1773.17c ||SPBP26C9.01c|hydroxyacid dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GEVLGLVGQNGIGKSTALKIL 64
G+ +G++G IGKS A KIL
Sbjct: 159 GKRVGIIGMGAIGKSFAQKIL 179
>SPBC3B9.03 |||signal recognition particle receptor alpha subunit
Srp101|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 11 LGLVGQNGIGKSTALKILA 67
+ L+G NG+GKST L +A
Sbjct: 345 ISLIGVNGVGKSTTLAKIA 363
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -3
Query: 181 IFEDLCEVILQLRAPEMSKYLLPIWRVSVTTQVGLLLASKNLQCSRLS 38
+F++LC ++ P++ + R SV VGL + K CS+L+
Sbjct: 79 VFDELCSLV----DPKVDAFTPKKGRPSVIMMVGLQGSGKTTTCSKLA 122
>SPBC56F2.04 |utp20||U3 snoRNP protein Utp20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2493
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 172 DLCEVILQLRA-PEMSKYLLPIWRVSVTTQVGLLLASKNLQCSRLSYTVLANK 17
D E++ ++ + +S L P+ V T V L + C RLS ++ANK
Sbjct: 1772 DSYEIVARISSFDSLSTLLRPVKNVLFETNVPKSLRKVDELCRRLSLGIVANK 1824
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 14 GLVGQNGIGKSTALKILAGKQK 79
GLVG +GKS+ + L G +K
Sbjct: 305 GLVGYPNVGKSSTINALVGSKK 326
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,255,560
Number of Sequences: 5004
Number of extensions: 70752
Number of successful extensions: 252
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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