Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0739
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.86 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   6.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.0  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 232 IFGIIHLLIFTVQRVDFLKLIVRHLPHVGGIIRMVKHKQKNI 107
           ++   H+  F     DF+ LIV ++ HV    R V +K  NI
Sbjct: 68  MYAFTHIFFFFAICCDFIALIVVNIVHVFR-KRRVNYKDSNI 108


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 634 NFRTEVDQLFFFRKLDLDFERLKTCNLSFYKI 539
           +F   +D LFFFR     FE     N+S   +
Sbjct: 214 HFVNYIDDLFFFRFEKSKFEPFLISNISLVSL 245


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 452 KLSGMRLIYKRRK 490
           KL GM+++ KRRK
Sbjct: 366 KLCGMKIVKKRRK 378


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 394 FYNYSFGVDKNKQEFWTSILKVRNI 320
           +Y Y FG+ + +  F+  + K + I
Sbjct: 277 YYQYPFGLPEYEYSFYQEVKKPKKI 301


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 301 YSCNFKLYFAPLELKSKILVC 363
           Y CN KL F     +SK+  C
Sbjct: 322 YHCNCKLGFMGRHCESKVNFC 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,444
Number of Sequences: 336
Number of extensions: 3500
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)