Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0739
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0139 - 1660382-1660729,1660826-1661008,1662122-1663057,166...    28   9.2  
02_01_0429 - 3132848-3135043                                           28   9.2  
02_01_0428 - 3127098-3129254                                           28   9.2  
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311...    28   9.2  
02_01_0407 - 2963907-2964063,2965158-2965311,2965427-2968527,296...    28   9.2  

>10_01_0139 -
           1660382-1660729,1660826-1661008,1662122-1663057,
           1667929-1668084,1669081-1669971
          Length = 837

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -1

Query: 421 ITIKTEKLQFYNYSFGVDKN--KQEFWTSILKVRNII*NYMNSIILVKNKI 275
           +T  +  ++FY +S+G D N  +Q  W S+  V N+  NY  + +  +N +
Sbjct: 255 LTTTSVSVKFYTFSYGFDANDLRQCLW-SLSGVTNLELNYEGTELTFENNL 304


>02_01_0429 - 3132848-3135043
          Length = 731

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 266 SNLMILDIVLNNFRNNSSINIY 201
           SNLMI+D+++NNF      +IY
Sbjct: 351 SNLMIIDLLVNNFNGTIPESIY 372


>02_01_0428 - 3127098-3129254
          Length = 718

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 266 SNLMILDIVLNNFRNNSSINIY 201
           SNLMI+D+++NNF      +IY
Sbjct: 338 SNLMIIDLLVNNFNGTIPESIY 359


>02_01_0425 -
           3102629-3104692,3106505-3108546,3109918-3109989,
           3110157-3111444
          Length = 1821

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 266 SNLMILDIVLNNFRNNSSINIY 201
           SNLMI+D+++NNF      +IY
Sbjct: 774 SNLMIIDLLVNNFNGTIPESIY 795


>02_01_0407 -
           2963907-2964063,2965158-2965311,2965427-2968527,
           2968684-2968697
          Length = 1141

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 263 NLMILDIVLNNFRNNSSINIYS 198
           NL  LD++LNNF      NIYS
Sbjct: 348 NLQTLDLLLNNFNGTIPQNIYS 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,852
Number of Sequences: 37544
Number of extensions: 290472
Number of successful extensions: 462
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)