Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0739
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.8  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.4  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   7.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   7.1  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   9.4  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 643 YSHTSNMPYDMLMW 684
           Y HT N P+D+  W
Sbjct: 63  YDHTKNYPFDVDQW 76


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 643 YSHTSNMPYDMLMW 684
           Y HT N P+D+  W
Sbjct: 60  YDHTKNYPFDVDQW 73


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 385 YSFGVDKNKQEFWTSILKVRNII 317
           Y+F    NK+  WTS+ K   I+
Sbjct: 795 YTFEQFHNKELLWTSVKKALMIV 817


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 385 YSFGVDKNKQEFWTSILKVRNII 317
           Y+F    NK+  WTS+ K   I+
Sbjct: 833 YTFEQFHNKELLWTSVKKALMIV 855


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +1

Query: 643 YSHTSNMPYDMLMW 684
           + HT N P+D+  W
Sbjct: 65  FDHTKNYPFDVDRW 78


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 418 TIKTEKLQFYNYSFGVDKN 362
           T + EKL++  Y FG + N
Sbjct: 20  TTQEEKLEWTKYPFGAEAN 38


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 142  YRQRAVGGARLVSRNP 189
            Y+Q  VGGA L  R P
Sbjct: 1622 YQQTGVGGATLDKRRP 1637


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 636 GFVLSHIQYAL 668
           GFVL+ IQYA+
Sbjct: 7   GFVLNRIQYAI 17


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,150
Number of Sequences: 438
Number of extensions: 4046
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)