BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0738 (725 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_04_0009 - 12132781-12133272 31 1.2 06_03_0536 + 21906583-21908037 30 2.2 03_05_0232 + 22174516-22174768,22175278-22175471,22175557-221756... 30 2.2 04_04_0415 + 25038826-25038835,25039333-25039964,25040484-250405... 28 8.7 03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 28 8.7 >11_04_0009 - 12132781-12133272 Length = 163 Score = 30.7 bits (66), Expect = 1.2 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -1 Query: 548 GAVWRRTQRDSRVSARQYDNERIAGALR*GLSPADRGDNAGPSDR 414 G WRR +RDS++ +R R+ G R G ++AG R Sbjct: 109 GEAWRRERRDSKIESRPSQRRRVGG--RRGCGSGTCAESAGSGRR 151 >06_03_0536 + 21906583-21908037 Length = 484 Score = 29.9 bits (64), Expect = 2.2 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Frame = -2 Query: 703 CARPAHKHALTHELLSSRRDSER----PSARFNFSTNLLWNFS 587 C P H A H LLS R P R N S+NL+W S Sbjct: 357 CMHPLHVTAFCHRLLSGDEREWRPVCMPEHRSNISSNLVWTES 399 >03_05_0232 + 22174516-22174768,22175278-22175471,22175557-22175604, 22176707-22176784,22178073-22178145,22178406-22178577, 22179652-22180083,22180209-22180400,22180696-22180771 Length = 505 Score = 29.9 bits (64), Expect = 2.2 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -3 Query: 570 ADYPNPCWGCLAPHAARLASERATV 496 +DYP WG AP+ A A+E++T+ Sbjct: 151 SDYPRLFWGAFAPNTASGATEQSTI 175 >04_04_0415 + 25038826-25038835,25039333-25039964,25040484-25040561, 25040588-25040833,25041598-25041684,25041860-25042024 Length = 405 Score = 27.9 bits (59), Expect = 8.7 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Frame = -3 Query: 525 ARLASERATVRQRAH-RRSAAVRTEPCRSW 439 AR +S T +R+H RR+A +E CRSW Sbjct: 55 ARQSSSEQTRERRSHLRRNALQVSERCRSW 84 >03_05_0176 + 21546952-21547887,21548856-21548921,21549959-21550877, 21551277-21551449,21551927-21552475 Length = 880 Score = 27.9 bits (59), Expect = 8.7 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 253 GTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTECLY-FRKIS 128 GTF P + +K C+RK+ + S ++++ T CL F+ +S Sbjct: 207 GTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLS 249 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,198,863 Number of Sequences: 37544 Number of extensions: 325912 Number of successful extensions: 1020 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 985 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1020 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1898162308 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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