Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0738
         (725 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0009 - 12132781-12133272                                         31   1.2  
06_03_0536 + 21906583-21908037                                         30   2.2  
03_05_0232 + 22174516-22174768,22175278-22175471,22175557-221756...    30   2.2  
04_04_0415 + 25038826-25038835,25039333-25039964,25040484-250405...    28   8.7  
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508...    28   8.7  

>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 548 GAVWRRTQRDSRVSARQYDNERIAGALR*GLSPADRGDNAGPSDR 414
           G  WRR +RDS++ +R     R+ G  R G       ++AG   R
Sbjct: 109 GEAWRRERRDSKIESRPSQRRRVGG--RRGCGSGTCAESAGSGRR 151


>06_03_0536 + 21906583-21908037
          Length = 484

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = -2

Query: 703 CARPAHKHALTHELLSSRRDSER----PSARFNFSTNLLWNFS 587
           C  P H  A  H LLS      R    P  R N S+NL+W  S
Sbjct: 357 CMHPLHVTAFCHRLLSGDEREWRPVCMPEHRSNISSNLVWTES 399


>03_05_0232 +
           22174516-22174768,22175278-22175471,22175557-22175604,
           22176707-22176784,22178073-22178145,22178406-22178577,
           22179652-22180083,22180209-22180400,22180696-22180771
          Length = 505

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -3

Query: 570 ADYPNPCWGCLAPHAARLASERATV 496
           +DYP   WG  AP+ A  A+E++T+
Sbjct: 151 SDYPRLFWGAFAPNTASGATEQSTI 175


>04_04_0415 +
           25038826-25038835,25039333-25039964,25040484-25040561,
           25040588-25040833,25041598-25041684,25041860-25042024
          Length = 405

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -3

Query: 525 ARLASERATVRQRAH-RRSAAVRTEPCRSW 439
           AR +S   T  +R+H RR+A   +E CRSW
Sbjct: 55  ARQSSSEQTRERRSHLRRNALQVSERCRSW 84


>03_05_0176 +
           21546952-21547887,21548856-21548921,21549959-21550877,
           21551277-21551449,21551927-21552475
          Length = 880

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 253 GTFLEKLPPLRRNKICSRKLTLRSIMILIFFFTECLY-FRKIS 128
           GTF    P +  +K C+RK+ + S  ++++  T CL  F+ +S
Sbjct: 207 GTFRWMAPEMIHDKRCNRKVDVYSFGLVLWELTTCLVPFQNLS 249


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,198,863
Number of Sequences: 37544
Number of extensions: 325912
Number of successful extensions: 1020
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)